Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
---|---|
Accession | NC_009697 |
Length | 3,863,450 |
Click here to switch to the map view.
The map label for this gene is 153933657
Identifier: 153933657
GI number: 153933657
Start: 2587045
End: 2587587
Strand: Reverse
Name: 153933657
Synonym: CLB_2468
Alternate gene names: NA
Gene position: 2587587-2587045 (Counterclockwise)
Preceding gene: 153931167
Following gene: 153932814
Centisome position: 66.98
GC content: 31.86
Gene sequence:
>543_bases ATGATACTAGAAGAAACTATAAAAATATTAAGTATTATAAAGGCAGCATACCCACAATGGGCTAGAGATTTAAAGCCTAC GGATGCTAAAACTATGGTCAATTTATGGAGCACTATGTTAGAGGACTATCCATATAACGTAGTACAAATAGCTATTAAAA AGATTATAGCAACAAATAAGTTTCCACCAAGTGTGGCGGAAGTAATAGAAGCTATAAATTATATAACTAGTGGTGGAAAA TCAGAAATGACAGAAATTGAAGCATGGGGATTAGTGCGGAAAGCTATAAAAAACTCTGCTTATAATGCTGAAGAAGAATT TAATAAATTGCCTGAAAAGATACAACAGGCAATAGGAAGTCATAACATACTCCATAATTGGAGCCAAGAAACTGTAGATG GAATTGAAAAAGTTATAGGGTCTAATTTTATGAGAAGTTATAAGGCTACTGTAATAAGAAAAAAAGAAGAAAAGCAGTTA CCATCATCAATTAAAAAAATGTTAGGTAATGTAGGTCAAAAAATGATTGAGGGGGATAAGTAA
Upstream 100 bases:
>100_bases GAAAGGTGTATTCCCATTGAAGCAAGAATCCATAAAACAAAATTCAAGTAATACTGATTCAAGCAACCCATTTTTAAATA TGTTGAATGGGGGTATGTAG
Downstream 100 bases:
>100_bases TGGAAATAAATGAGTTAGTAGAAAAGGCACATAGAAATGCTAAAAGTCATGGCTTTTGGGAAGATTGGGAAAGAATTGAG CAGCTAGAAAATATGACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MILEETIKILSIIKAAYPQWARDLKPTDAKTMVNLWSTMLEDYPYNVVQIAIKKIIATNKFPPSVAEVIEAINYITSGGK SEMTEIEAWGLVRKAIKNSAYNAEEEFNKLPEKIQQAIGSHNILHNWSQETVDGIEKVIGSNFMRSYKATVIRKKEEKQL PSSIKKMLGNVGQKMIEGDK
Sequences:
>Translated_180_residues MILEETIKILSIIKAAYPQWARDLKPTDAKTMVNLWSTMLEDYPYNVVQIAIKKIIATNKFPPSVAEVIEAINYITSGGK SEMTEIEAWGLVRKAIKNSAYNAEEEFNKLPEKIQQAIGSHNILHNWSQETVDGIEKVIGSNFMRSYKATVIRKKEEKQL PSSIKKMLGNVGQKMIEGDK >Mature_180_residues MILEETIKILSIIKAAYPQWARDLKPTDAKTMVNLWSTMLEDYPYNVVQIAIKKIIATNKFPPSVAEVIEAINYITSGGK SEMTEIEAWGLVRKAIKNSAYNAEEEFNKLPEKIQQAIGSHNILHNWSQETVDGIEKVIGSNFMRSYKATVIRKKEEKQL PSSIKKMLGNVGQKMIEGDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20371; Mature: 20371
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILEETIKILSIIKAAYPQWARDLKPTDAKTMVNLWSTMLEDYPYNVVQIAIKKIIATNK CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC FPPSVAEVIEAINYITSGGKSEMTEIEAWGLVRKAIKNSAYNAEEEFNKLPEKIQQAIGS CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC HNILHNWSQETVDGIEKVIGSNFMRSYKATVIRKKEEKQLPSSIKKMLGNVGQKMIEGDK CHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MILEETIKILSIIKAAYPQWARDLKPTDAKTMVNLWSTMLEDYPYNVVQIAIKKIIATNK CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC FPPSVAEVIEAINYITSGGKSEMTEIEAWGLVRKAIKNSAYNAEEEFNKLPEKIQQAIGS CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC HNILHNWSQETVDGIEKVIGSNFMRSYKATVIRKKEEKQLPSSIKKMLGNVGQKMIEGDK CHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA