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The map label for this gene is yaaJ [C]

Identifier: 153933146

GI number: 153933146

Start: 2629491

End: 2630825

Strand: Reverse

Name: yaaJ [C]

Synonym: CLB_2518

Alternate gene names: 153933146

Gene position: 2630825-2629491 (Counterclockwise)

Preceding gene: 153932101

Following gene: 153932204

Centisome position: 68.1

GC content: 33.71

Gene sequence:

>1335_bases
ATGGACTTATTAAAAATTGTTGAGGGCTTTAATAATATACTTTGGAGTTATATTTTAATGTTCTTTTTATTTGGTGCAGG
AATATTTTTTACTTTTAATTTAAGATTTGTACAAGTAAGAAAGTTTAAGGCTATGTTTAAACAGGTTTTTTCAAAGAACC
AAGATAGAGATTCAGGTATAACATCTTTCCAAGCTTTGGCTACAGCAGTGGCAGCGCAAGTTGGAACGGGAAACTTAGCA
GGGGCTGCTACAGCAATAGCGGCTGGAGGTCCAGGAGCTATATTTTGGATGTGGGTTAGTGCTTTCTTTGGTATGGGAAC
TATATTTTCAGAAGCAATTTTAGCGCAAAAATATAAAGTTAAAAAAGATAACGGAGAAGTGCTTGGAGGACCAGCTTATT
ATATAAGAGATGGATTTGGTAGTAAAAAGCTGGCAGGTTTCTTTGCTTTTTCAATGATGGTGTCAGCTTGTTTAACTGGG
GATATGGTACAATCCAATTCAATTGGTATATCTATAAATAAAGCCTTTGGAGTTCCCAATATAGTTGTGGGTATAATAGT
AGCAATACTTACTGCGTTAATAGTTCTTGGAGGAATACAAAGAATAGCATCAGTTACAGAAAAATTAGTTCCTATTATGG
CCTTATTTTTTATCATAGGAAGTCTAATAATAATAGGAATTAATTATGATAATATAGGTCCAGCCTTTAAAATGATATTT
TTAGGGGCTTTTAATCCTAAAGCAGCTACAGGAGGACTTATAGGTGTATCTGTAAGGGAAGCCATGAGATATGGAATATC
TAGAGGGTTATTTTCTAATGAAGCTGGTATGGGCTCTACTCCACATGCTCATGCTGTGGCAGATGTTAAACATCCAGCTC
AGCAAGGACTTGTAGCCATGTTTGGATTATTTATTGATACTTTTGTTGTCTTAACTTGTACAGCCATGGTAATTTTAACA
ACTGGAGCTTTAGATGGAAAGACTACAGGTATAGAGTTAACTCAACAGGCCTTTATAAATGGTTTTGGGCATTTTGGTAA
TATATTCGTAGCAGTAAGTTTATTCTTCTTTGCTTTCTCAACAATAATTGGGTGGTATTTCTTTGGGTTATTAAATGTTA
AGTTTATATTTGGTGATAAAGGGACGAGACCTTATGTAGTATTATTCCTTGTAGCCTTAGTAGTAGGAACAATTTTAGAT
GTACCGTTAGTATGGCAGCTAGCAGATACCTTTAATGGATTTATGGTAATACCTAATTTAATAGCATTAATAGCATTAGC
TAAATTAGTTAAAAAAGAACTTAAGGATTATGAAAATAACTTCTCTATAAAATAA

Upstream 100 bases:

>100_bases
TTGAACTAAAAAGAGGTTTTACCAAGAATTTAAAAGATGATAACATTTACAATAAATAAAAGAAATCTTAAAAAAAATAC
TAAAACAAAGGAGGGTGTTT

Downstream 100 bases:

>100_bases
TTATTAGCTTTAGATGAAAGTTTAGAAAGAATGATTGCTTTATAATAAGGTTCAGAAAAAATTATTTGAAGAGTTATTAG
AAGGTCAACAATGAAAAATA

Product: sodium:alanine symporter family protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MDLLKIVEGFNNILWSYILMFFLFGAGIFFTFNLRFVQVRKFKAMFKQVFSKNQDRDSGITSFQALATAVAAQVGTGNLA
GAATAIAAGGPGAIFWMWVSAFFGMGTIFSEAILAQKYKVKKDNGEVLGGPAYYIRDGFGSKKLAGFFAFSMMVSACLTG
DMVQSNSIGISINKAFGVPNIVVGIIVAILTALIVLGGIQRIASVTEKLVPIMALFFIIGSLIIIGINYDNIGPAFKMIF
LGAFNPKAATGGLIGVSVREAMRYGISRGLFSNEAGMGSTPHAHAVADVKHPAQQGLVAMFGLFIDTFVVLTCTAMVILT
TGALDGKTTGIELTQQAFINGFGHFGNIFVAVSLFFFAFSTIIGWYFFGLLNVKFIFGDKGTRPYVVLFLVALVVGTILD
VPLVWQLADTFNGFMVIPNLIALIALAKLVKKELKDYENNFSIK

Sequences:

>Translated_444_residues
MDLLKIVEGFNNILWSYILMFFLFGAGIFFTFNLRFVQVRKFKAMFKQVFSKNQDRDSGITSFQALATAVAAQVGTGNLA
GAATAIAAGGPGAIFWMWVSAFFGMGTIFSEAILAQKYKVKKDNGEVLGGPAYYIRDGFGSKKLAGFFAFSMMVSACLTG
DMVQSNSIGISINKAFGVPNIVVGIIVAILTALIVLGGIQRIASVTEKLVPIMALFFIIGSLIIIGINYDNIGPAFKMIF
LGAFNPKAATGGLIGVSVREAMRYGISRGLFSNEAGMGSTPHAHAVADVKHPAQQGLVAMFGLFIDTFVVLTCTAMVILT
TGALDGKTTGIELTQQAFINGFGHFGNIFVAVSLFFFAFSTIIGWYFFGLLNVKFIFGDKGTRPYVVLFLVALVVGTILD
VPLVWQLADTFNGFMVIPNLIALIALAKLVKKELKDYENNFSIK
>Mature_444_residues
MDLLKIVEGFNNILWSYILMFFLFGAGIFFTFNLRFVQVRKFKAMFKQVFSKNQDRDSGITSFQALATAVAAQVGTGNLA
GAATAIAAGGPGAIFWMWVSAFFGMGTIFSEAILAQKYKVKKDNGEVLGGPAYYIRDGFGSKKLAGFFAFSMMVSACLTG
DMVQSNSIGISINKAFGVPNIVVGIIVAILTALIVLGGIQRIASVTEKLVPIMALFFIIGSLIIIGINYDNIGPAFKMIF
LGAFNPKAATGGLIGVSVREAMRYGISRGLFSNEAGMGSTPHAHAVADVKHPAQQGLVAMFGLFIDTFVVLTCTAMVILT
TGALDGKTTGIELTQQAFINGFGHFGNIFVAVSLFFFAFSTIIGWYFFGLLNVKFIFGDKGTRPYVVLFLVALVVGTILD
VPLVWQLADTFNGFMVIPNLIALIALAKLVKKELKDYENNFSIK

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=435, Percent_Identity=39.5402298850575, Blast_Score=287, Evalue=9e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 47858; Mature: 47858

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLLKIVEGFNNILWSYILMFFLFGAGIFFTFNLRFVQVRKFKAMFKQVFSKNQDRDSGI
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCH
TSFQALATAVAAQVGTGNLAGAATAIAAGGPGAIFWMWVSAFFGMGTIFSEAILAQKYKV
HHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
KKDNGEVLGGPAYYIRDGFGSKKLAGFFAFSMMVSACLTGDMVQSNSIGISINKAFGVPN
ECCCCCEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEECCCCCHH
IVVGIIVAILTALIVLGGIQRIASVTEKLVPIMALFFIIGSLIIIGINYDNIGPAFKMIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHH
LGAFNPKAATGGLIGVSVREAMRYGISRGLFSNEAGMGSTPHAHAVADVKHPAQQGLVAM
HCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHH
FGLFIDTFVVLTCTAMVILTTGALDGKTTGIELTQQAFINGFGHFGNIFVAVSLFFFAFS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIIGWYFFGLLNVKFIFGDKGTRPYVVLFLVALVVGTILDVPLVWQLADTFNGFMVIPNL
HHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHH
IALIALAKLVKKELKDYENNFSIK
HHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDLLKIVEGFNNILWSYILMFFLFGAGIFFTFNLRFVQVRKFKAMFKQVFSKNQDRDSGI
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCH
TSFQALATAVAAQVGTGNLAGAATAIAAGGPGAIFWMWVSAFFGMGTIFSEAILAQKYKV
HHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
KKDNGEVLGGPAYYIRDGFGSKKLAGFFAFSMMVSACLTGDMVQSNSIGISINKAFGVPN
ECCCCCEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEECCCCCHH
IVVGIIVAILTALIVLGGIQRIASVTEKLVPIMALFFIIGSLIIIGINYDNIGPAFKMIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHH
LGAFNPKAATGGLIGVSVREAMRYGISRGLFSNEAGMGSTPHAHAVADVKHPAQQGLVAM
HCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHH
FGLFIDTFVVLTCTAMVILTTGALDGKTTGIELTQQAFINGFGHFGNIFVAVSLFFFAFS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIIGWYFFGLLNVKFIFGDKGTRPYVVLFLVALVVGTILDVPLVWQLADTFNGFMVIPNL
HHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHH
IALIALAKLVKKELKDYENNFSIK
HHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]