Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
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Accession | NC_009697 |
Length | 3,863,450 |
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The map label for this gene is 153932394
Identifier: 153932394
GI number: 153932394
Start: 2578554
End: 2579027
Strand: Reverse
Name: 153932394
Synonym: CLB_2452
Alternate gene names: NA
Gene position: 2579027-2578554 (Counterclockwise)
Preceding gene: 153933698
Following gene: 153931955
Centisome position: 66.75
GC content: 31.65
Gene sequence:
>474_bases ATGGCACAACGTAGTCTAAGACCATGCAAGCAACGTTGGTGTAAGAACCTAACAAGAGATATAACAGGTTACTGCGAGGA ACATATACACATATATGAGGAAAGAAAAGCACAAAGAAATAAACACTATGATAAACGTATAAGATATAACAAGGATAAGA AGTATACTAAGTTTTATCATAATAAAGAATGGGAAAGATTGAGAGAAGATATTTTAAAAACTTATAATGGAATTGATATA TATAGTTATTATATAGAGAGTAAAATAGTAATTGCTAATACAGTGCATCATATAGAAGAGGTAAAAGATAATTGGGATAA AAGGTTAGATGTAGACAACCTATTTCCTTTATCAGATGTTACACATAATAAGATACACAGTCTCTATAGTAAGGATAAGA AGGAAACCCAAAGGCTCCTTGTAGAGCTGCTAGAAAGATTTAGAAAACAATTTGGTATATCCCCCCTCCCTTAG
Upstream 100 bases:
>100_bases TTAATGAGGTTAAGAATATAACAATAAATAATAATGCAGACATAAAAGATATAATGAAGAGGTGTGTGGAAGCAGCAATA AGTATGGAGTCTTTAAAGTA
Downstream 100 bases:
>100_bases AGAATTTAGCACTCTTTCAAAAGACCGAGGGGGTAGATTCCCTCATAAAAAATTCCCTAAATGAAAATTTGAGAAGAGGT GAAAATATGGAACGTACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: HNH Endonuclease; Bacteriophage Protein; Gp50 Protein; Electron Transporter
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MAQRSLRPCKQRWCKNLTRDITGYCEEHIHIYEERKAQRNKHYDKRIRYNKDKKYTKFYHNKEWERLREDILKTYNGIDI YSYYIESKIVIANTVHHIEEVKDNWDKRLDVDNLFPLSDVTHNKIHSLYSKDKKETQRLLVELLERFRKQFGISPLP
Sequences:
>Translated_157_residues MAQRSLRPCKQRWCKNLTRDITGYCEEHIHIYEERKAQRNKHYDKRIRYNKDKKYTKFYHNKEWERLREDILKTYNGIDI YSYYIESKIVIANTVHHIEEVKDNWDKRLDVDNLFPLSDVTHNKIHSLYSKDKKETQRLLVELLERFRKQFGISPLP >Mature_156_residues AQRSLRPCKQRWCKNLTRDITGYCEEHIHIYEERKAQRNKHYDKRIRYNKDKKYTKFYHNKEWERLREDILKTYNGIDIY SYYIESKIVIANTVHHIEEVKDNWDKRLDVDNLFPLSDVTHNKIHSLYSKDKKETQRLLVELLERFRKQFGISPLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19359; Mature: 19228
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQRSLRPCKQRWCKNLTRDITGYCEEHIHIYEERKAQRNKHYDKRIRYNKDKKYTKFYH CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC NKEWERLREDILKTYNGIDIYSYYIESKIVIANTVHHIEEVKDNWDKRLDVDNLFPLSDV CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH THNKIHSLYSKDKKETQRLLVELLERFRKQFGISPLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AQRSLRPCKQRWCKNLTRDITGYCEEHIHIYEERKAQRNKHYDKRIRYNKDKKYTKFYH CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC NKEWERLREDILKTYNGIDIYSYYIESKIVIANTVHHIEEVKDNWDKRLDVDNLFPLSDV CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH THNKIHSLYSKDKKETQRLLVELLERFRKQFGISPLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA