| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is 153932321
Identifier: 153932321
GI number: 153932321
Start: 2694388
End: 2696067
Strand: Reverse
Name: 153932321
Synonym: CLB_2574
Alternate gene names: NA
Gene position: 2696067-2694388 (Counterclockwise)
Preceding gene: 153933126
Following gene: 153930885
Centisome position: 69.78
GC content: 27.74
Gene sequence:
>1680_bases ATGAAAGCACTATTAGTAGCCATTAACTCTAAATATATTCATAGTAATCTAGCTCTTAGATATTTAAGAGCTAATACAGA GGATTTAAATTATGAGTGTGTGTTAAAAGAATTTACTATAAATGATAGAAAAGAAAATATATTAGAAAAAATAATTATGG AAAAAGCTGATTTAGTGGCTTTTTCTTGCTATATATGGAATTTAGAATATGTAGAGGAACTAGCAAATTTAATTAAATTA GTAAAGCCTTCTACAGAAATAGTTTTTGGGGGACCAGAAGTTTCATATGATAGTGAAAGTTTTCTAAGGAAAGTCCCTGG AGAATATGTTATAGAGGGAGAAGGAGAAGAAACCTTTAGAGAATTTATTAAATGCAAAATAGAAAATAAAAGCGTAGATA GGGTAAAGGGGCTATATAGTAAGACATTAAATGGTATAGAGTATACTGGGGAAAGACATAATATTTCTATGGATTCGGTA GTATTTCCTTATAAAGAAGAGGAAGATTTAAAAAATAAAATAGTTTATTACGAGGCTTCAAGGGGGTGTCCTTTTAAGTG TAAGTATTGTTTGTCTTCCACACTGCACGGGGTAAGATTTCATGACATAGAAAGAGTAAAGAAAGAAATTAAATTTTTAG TAGATAAAAATGTTAAGCTTATTAAATTCGTAGATAGAACTTTTAATTGTAATCACAAATTTGCAATGAGAATATGGGAG TATATTCTGAATCTTGATACAGATGCCACTTTTCATTTTGAAATATCCGCTGACTTGCTTACAAAGGAAGAGTTAGAAAT TTTAAGCAAAGGGAAAGAGGGCAGGATTCAATTTGAAGTGGGAGTTCAAACTACTAATAATGAAGTTTTAAAAAATATAA ATAGACATGTAAATTTTGAAACTATTAAAGAAAAGGTAGAGGAGCTTAAAAATCTTAAGAATATAAAGCAACATTTAGAT CTCATCGCAGGGCTGCCAGGAGAGGATTATAACTCTTTTAAAAATTCTTTCAATGATGTTTATAGTATAGAGCCTGAGGA AATACAATTAGGGTTTTTAAAACTTTTAAAGGGATCTCCTATGAGGCTAGAGGCAGAAAAGTGGCGGATGGTATATTCAC CTTATCCTCCTTATGAAATATTAAGCACAAAGGACATAAGTTATGAGGAGCTTCTTATACTAAAAAAAGTAGAAGCTGTA GTAGATAAATATTATAATTCAGGGAAATTTAACAATATACTAAAATATTTCAGTTCAGAATTTAAAAAGCCCTTCGATTT TTATTATACTTTAGCTATGTTTTGCAATAATAAAGGATATTTTGACAGAAATATATCTGGACCCCAATACTATAAGGTTT TTATAGAATTTAACGAAGAAGTTCTAAAGAAAGATAGCTTATTTTTAAAAGAAGTAATAAAATATGATTATTTAAAATTT AATAAAAAGCAATGGTTGCCAGAGTTTTTAATTAGAGATATAGATAAAAAAATTAAAATAAGTTTAAAAGAGAAGATACT AAAAAATGAAGTACAAATATCAGATAATATTCATATAGAAAAATTTTTGGTGGACATAGAAAAATTTATAAAGGAAGGTA TAAAAGAAAAAAGAGAAATATACGCTATATTTTCCCAAGAAGATATAGAAAGTATAATTTTTTTAACAAACTACAAATAG
Upstream 100 bases:
>100_bases ATAAAAGATTTGAAATCTTCCGATGGAGTGTATTACATAAAAGGGAAGAAAAAAATAAATACTAATACCAAAGAGGACGA AAAGAGGAAGGAAGAAATTA
Downstream 100 bases:
>100_bases GACTAAAAAAATAAAGAAAATTCAAAAAAATCAAAAAAGGCACTATAAAATGAAGTTCAATTATTCGATAATATTCATAT AGAGAAATATATGTCATATT
Product: putative B12-binding Fe-S oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 559; Mature: 559
Protein sequence:
>559_residues MKALLVAINSKYIHSNLALRYLRANTEDLNYECVLKEFTINDRKENILEKIIMEKADLVAFSCYIWNLEYVEELANLIKL VKPSTEIVFGGPEVSYDSESFLRKVPGEYVIEGEGEETFREFIKCKIENKSVDRVKGLYSKTLNGIEYTGERHNISMDSV VFPYKEEEDLKNKIVYYEASRGCPFKCKYCLSSTLHGVRFHDIERVKKEIKFLVDKNVKLIKFVDRTFNCNHKFAMRIWE YILNLDTDATFHFEISADLLTKEELEILSKGKEGRIQFEVGVQTTNNEVLKNINRHVNFETIKEKVEELKNLKNIKQHLD LIAGLPGEDYNSFKNSFNDVYSIEPEEIQLGFLKLLKGSPMRLEAEKWRMVYSPYPPYEILSTKDISYEELLILKKVEAV VDKYYNSGKFNNILKYFSSEFKKPFDFYYTLAMFCNNKGYFDRNISGPQYYKVFIEFNEEVLKKDSLFLKEVIKYDYLKF NKKQWLPEFLIRDIDKKIKISLKEKILKNEVQISDNIHIEKFLVDIEKFIKEGIKEKREIYAIFSQEDIESIIFLTNYK
Sequences:
>Translated_559_residues MKALLVAINSKYIHSNLALRYLRANTEDLNYECVLKEFTINDRKENILEKIIMEKADLVAFSCYIWNLEYVEELANLIKL VKPSTEIVFGGPEVSYDSESFLRKVPGEYVIEGEGEETFREFIKCKIENKSVDRVKGLYSKTLNGIEYTGERHNISMDSV VFPYKEEEDLKNKIVYYEASRGCPFKCKYCLSSTLHGVRFHDIERVKKEIKFLVDKNVKLIKFVDRTFNCNHKFAMRIWE YILNLDTDATFHFEISADLLTKEELEILSKGKEGRIQFEVGVQTTNNEVLKNINRHVNFETIKEKVEELKNLKNIKQHLD LIAGLPGEDYNSFKNSFNDVYSIEPEEIQLGFLKLLKGSPMRLEAEKWRMVYSPYPPYEILSTKDISYEELLILKKVEAV VDKYYNSGKFNNILKYFSSEFKKPFDFYYTLAMFCNNKGYFDRNISGPQYYKVFIEFNEEVLKKDSLFLKEVIKYDYLKF NKKQWLPEFLIRDIDKKIKISLKEKILKNEVQISDNIHIEKFLVDIEKFIKEGIKEKREIYAIFSQEDIESIIFLTNYK >Mature_559_residues MKALLVAINSKYIHSNLALRYLRANTEDLNYECVLKEFTINDRKENILEKIIMEKADLVAFSCYIWNLEYVEELANLIKL VKPSTEIVFGGPEVSYDSESFLRKVPGEYVIEGEGEETFREFIKCKIENKSVDRVKGLYSKTLNGIEYTGERHNISMDSV VFPYKEEEDLKNKIVYYEASRGCPFKCKYCLSSTLHGVRFHDIERVKKEIKFLVDKNVKLIKFVDRTFNCNHKFAMRIWE YILNLDTDATFHFEISADLLTKEELEILSKGKEGRIQFEVGVQTTNNEVLKNINRHVNFETIKEKVEELKNLKNIKQHLD LIAGLPGEDYNSFKNSFNDVYSIEPEEIQLGFLKLLKGSPMRLEAEKWRMVYSPYPPYEILSTKDISYEELLILKKVEAV VDKYYNSGKFNNILKYFSSEFKKPFDFYYTLAMFCNNKGYFDRNISGPQYYKVFIEFNEEVLKKDSLFLKEVIKYDYLKF NKKQWLPEFLIRDIDKKIKISLKEKILKNEVQISDNIHIEKFLVDIEKFIKEGIKEKREIYAIFSQEDIESIIFLTNYK
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 66128; Mature: 66128
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALLVAINSKYIHSNLALRYLRANTEDLNYECVLKEFTINDRKENILEKIIMEKADLVA CCEEEEEECCHHHHHHHHHHEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHEE FSCYIWNLEYVEELANLIKLVKPSTEIVFGGPEVSYDSESFLRKVPGEYVIEGEGEETFR EEEEEECHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCCCEEEECCCHHHHH EFIKCKIENKSVDRVKGLYSKTLNGIEYTGERHNISMDSVVFPYKEEEDLKNKIVYYEAS HHHHEECCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCEECCCCCCCCCCCEEEEEECC RGCPFKCKYCLSSTLHGVRFHDIERVKKEIKFLVDKNVKLIKFVDRTFNCNHKFAMRIWE CCCCCEEHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCHHHHHHHHH YILNLDTDATFHFEISADLLTKEELEILSKGKEGRIQFEVGVQTTNNEVLKNINRHVNFE HHHCCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCHH TIKEKVEELKNLKNIKQHLDLIAGLPGEDYNSFKNSFNDVYSIEPEEIQLGFLKLLKGSP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC MRLEAEKWRMVYSPYPPYEILSTKDISYEELLILKKVEAVVDKYYNSGKFNNILKYFSSE CEEEHHHCEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FKKPFDFYYTLAMFCNNKGYFDRNISGPQYYKVFIEFNEEVLKKDSLFLKEVIKYDYLKF HCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHC NKKQWLPEFLIRDIDKKIKISLKEKILKNEVQISDNIHIEKFLVDIEKFIKEGIKEKREI CHHHCCHHHHHHHCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHE YAIFSQEDIESIIFLTNYK EEEECHHCCCEEEEEECCC >Mature Secondary Structure MKALLVAINSKYIHSNLALRYLRANTEDLNYECVLKEFTINDRKENILEKIIMEKADLVA CCEEEEEECCHHHHHHHHHHEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHEE FSCYIWNLEYVEELANLIKLVKPSTEIVFGGPEVSYDSESFLRKVPGEYVIEGEGEETFR EEEEEECHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCCCEEEECCCHHHHH EFIKCKIENKSVDRVKGLYSKTLNGIEYTGERHNISMDSVVFPYKEEEDLKNKIVYYEAS HHHHEECCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCEECCCCCCCCCCCEEEEEECC RGCPFKCKYCLSSTLHGVRFHDIERVKKEIKFLVDKNVKLIKFVDRTFNCNHKFAMRIWE CCCCCEEHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCHHHHHHHHH YILNLDTDATFHFEISADLLTKEELEILSKGKEGRIQFEVGVQTTNNEVLKNINRHVNFE HHHCCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCHH TIKEKVEELKNLKNIKQHLDLIAGLPGEDYNSFKNSFNDVYSIEPEEIQLGFLKLLKGSP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC MRLEAEKWRMVYSPYPPYEILSTKDISYEELLILKKVEAVVDKYYNSGKFNNILKYFSSE CEEEHHHCEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FKKPFDFYYTLAMFCNNKGYFDRNISGPQYYKVFIEFNEEVLKKDSLFLKEVIKYDYLKF HCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHC NKKQWLPEFLIRDIDKKIKISLKEKILKNEVQISDNIHIEKFLVDIEKFIKEGIKEKREI CHHHCCHHHHHHHCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHE YAIFSQEDIESIIFLTNYK EEEECHHCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]