| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is fur [H]
Identifier: 153932039
GI number: 153932039
Start: 2611481
End: 2611933
Strand: Reverse
Name: fur [H]
Synonym: CLB_2501
Alternate gene names: 153932039
Gene position: 2611933-2611481 (Counterclockwise)
Preceding gene: 153932529
Following gene: 153931086
Centisome position: 67.61
GC content: 30.02
Gene sequence:
>453_bases GTGGCGGATTTTAAGAGAGAAGAAATTGAAAAGTTAAAGGAAGAATTAAAATCTAAGGGATATAAGTTAACTCCTCAAAG AAGAGCGATTATAGATATGATAAAAAAACATGAGGGTAGCCATTTAACTACAGAAGAGTTATACGATTTAGTAAAAGAAG AATGCCCAGAAATAGGTCTTGCAACGGTATATAGAACAGTACAACTTTTAGAAGAAATGGGTGTTATATATAAATTAGAC CTAGATGATGGATGTAGTAGATATGAATTGGTAAATGAAGATGAAAATCATCAGCATCATCACCTAATATGTAGTAAATG CAATAAGGTAATAGAGGTTAAGGATGATTTCTTAGAAGATTTAGAAGAAAACATTGAAGAAGAATATAATTTTAAAATAG AGAATCATAGTTTAAAGTTCTACGGTATCTGCAAGGAATGTCAAGGAAAATAA
Upstream 100 bases:
>100_bases ATATATAATTTGAAATTACAGATAAAGATTATCAATTGACAATAGAACAATACTGTATTAAACTTATATTAAAATAAAGT AGTTAAAGGTGGAATGAAAA
Downstream 100 bases:
>100_bases ATAATAAAACTATGATGAAAACATAAAAGAAAAAGGAGGGAAGAAGTTTGCGAGTGGACAAAGAAAAAGATAAAGCAAAA GATAGAGTAAAAGATAAGGA
Product: FUR family transcriptional regulator
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MADFKREEIEKLKEELKSKGYKLTPQRRAIIDMIKKHEGSHLTTEELYDLVKEECPEIGLATVYRTVQLLEEMGVIYKLD LDDGCSRYELVNEDENHQHHHLICSKCNKVIEVKDDFLEDLEENIEEEYNFKIENHSLKFYGICKECQGK
Sequences:
>Translated_150_residues MADFKREEIEKLKEELKSKGYKLTPQRRAIIDMIKKHEGSHLTTEELYDLVKEECPEIGLATVYRTVQLLEEMGVIYKLD LDDGCSRYELVNEDENHQHHHLICSKCNKVIEVKDDFLEDLEENIEEEYNFKIENHSLKFYGICKECQGK >Mature_149_residues ADFKREEIEKLKEELKSKGYKLTPQRRAIIDMIKKHEGSHLTTEELYDLVKEECPEIGLATVYRTVQLLEEMGVIYKLDL DDGCSRYELVNEDENHQHHHLICSKCNKVIEVKDDFLEDLEENIEEEYNFKIENHSLKFYGICKECQGK
Specific function: Iron uptake repressor. Acts on the transcription of ferri-siderophore uptake genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=131, Percent_Identity=36.6412213740458, Blast_Score=94, Evalue=5e-21, Organism=Escherichia coli, GI87082363, Length=129, Percent_Identity=24.8062015503876, Blast_Score=61, Evalue=3e-11,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 17754; Mature: 17623
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADFKREEIEKLKEELKSKGYKLTPQRRAIIDMIKKHEGSHLTTEELYDLVKEECPEIGL CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCH ATVYRTVQLLEEMGVIYKLDLDDGCSRYELVNEDENHQHHHLICSKCNKVIEVKDDFLED HHHHHHHHHHHHCCCEEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LEENIEEEYNFKIENHSLKFYGICKECQGK HHHHHHHHHCEEECCCCEEEEEECHHCCCC >Mature Secondary Structure ADFKREEIEKLKEELKSKGYKLTPQRRAIIDMIKKHEGSHLTTEELYDLVKEECPEIGL CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCH ATVYRTVQLLEEMGVIYKLDLDDGCSRYELVNEDENHQHHHLICSKCNKVIEVKDDFLED HHHHHHHHHHHHCCCEEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LEENIEEEYNFKIENHSLKFYGICKECQGK HHHHHHHHHCEEECCCCEEEEEECHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9701813 [H]