| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is 153931655
Identifier: 153931655
GI number: 153931655
Start: 2643476
End: 2644333
Strand: Reverse
Name: 153931655
Synonym: CLB_2527
Alternate gene names: NA
Gene position: 2644333-2643476 (Counterclockwise)
Preceding gene: 153933149
Following gene: 153933885
Centisome position: 68.44
GC content: 27.86
Gene sequence:
>858_bases GTGAGTATAGTTCGATTATTTACATTACCAGGGGCGGGTTCTTCAGCGATAATGTATTACAAATGGATACCGATCATTGG AAAGCAAATCAGACTAAGTCCATTAGAGATACCAGGCCGAGGAATTAAAGAGAGAGAAAAAAAAGCAGTAAGTCGTAGAA ATCTTATAGATTTGTTATTTGAAGATGTTAAATTAAAGTTAAAGAATGATGAAGAGTATATGATATTAGGAAATAGTGCA AGTTCAATTATAGCAATAGACCTATGTAGACTAATAGAGACGTATGAATTTAAAAGACCTAAACACATTTTTATTGCTGT GGAACCACCACCTGATATTTTAAAGAATAGAAAAAAGATGTTGGAAGATCCTAAGAAAAAGAACTTTGTGAAAAGTGTTT TTGAAAAATATTTTCTTGATGATTTAATTACAAAAGAGGAATTAAATGAATTATTATCTGTATTTTTAAATATTGTTTAT AACAACAGAGAAAAAATTTTAGATTTTTCTGCAGAAGATATGTATAAGGAGATATATGGAGATATAAAGATGATAAAAGG GAAGAAATATAAAGCATTAGAATTTGCACTTGAACATATAAAGCTTTTTATTGAGGATGAAAAAATAACTTCAGAAGATG AAATAAGTCTATTGCCTATCAATGTTGATTTAACTGTTTTCGGAGCTACTAATGATGAAGTAGCTAGTGAATTAGAATTA ATGAAATGGAAGGAATATACATGTGCAAAGTTTGAGTTATATATGGTAGAAGGAGATCATTTGATTCTATTTAATAATAA TGAAACTGTATTACAAAAGATACAGGAAAAAACAGAAACTATATTAAAAAAAATTTGA
Upstream 100 bases:
>100_bases ATATCTAAAATTTATGAAGAATTCAGTATAAAAAAACTCCTAAATTTAATACTAATATGATTATATCCAAGTTATTCTAT TTTCAAGGAGGTGTAATGGT
Downstream 100 bases:
>100_bases GGTGAATTATGAGATCAAGGATTAAGGGAGTAGGAAGATACTTACCAAATAGAATTGTAACTAGCGAGGAAGCGGAAGAA CTTGCAGGTTTTAAAAAATT
Product: putative bacT protein
Products: NA
Alternate protein names: BacT Protein; Oleoyl-(Acyl-Carrier-Protein) Hydrolase; Linear Gramicidin Dehydrogenase LgrE
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSIVRLFTLPGAGSSAIMYYKWIPIIGKQIRLSPLEIPGRGIKEREKKAVSRRNLIDLLFEDVKLKLKNDEEYMILGNSA SSIIAIDLCRLIETYEFKRPKHIFIAVEPPPDILKNRKKMLEDPKKKNFVKSVFEKYFLDDLITKEELNELLSVFLNIVY NNREKILDFSAEDMYKEIYGDIKMIKGKKYKALEFALEHIKLFIEDEKITSEDEISLLPINVDLTVFGATNDEVASELEL MKWKEYTCAKFELYMVEGDHLILFNNNETVLQKIQEKTETILKKI
Sequences:
>Translated_285_residues MSIVRLFTLPGAGSSAIMYYKWIPIIGKQIRLSPLEIPGRGIKEREKKAVSRRNLIDLLFEDVKLKLKNDEEYMILGNSA SSIIAIDLCRLIETYEFKRPKHIFIAVEPPPDILKNRKKMLEDPKKKNFVKSVFEKYFLDDLITKEELNELLSVFLNIVY NNREKILDFSAEDMYKEIYGDIKMIKGKKYKALEFALEHIKLFIEDEKITSEDEISLLPINVDLTVFGATNDEVASELEL MKWKEYTCAKFELYMVEGDHLILFNNNETVLQKIQEKTETILKKI >Mature_284_residues SIVRLFTLPGAGSSAIMYYKWIPIIGKQIRLSPLEIPGRGIKEREKKAVSRRNLIDLLFEDVKLKLKNDEEYMILGNSAS SIIAIDLCRLIETYEFKRPKHIFIAVEPPPDILKNRKKMLEDPKKKNFVKSVFEKYFLDDLITKEELNELLSVFLNIVYN NREKILDFSAEDMYKEIYGDIKMIKGKKYKALEFALEHIKLFIEDEKITSEDEISLLPINVDLTVFGATNDEVASELELM KWKEYTCAKFELYMVEGDHLILFNNNETVLQKIQEKTETILKKI
Specific function: Unknown
COG id: COG3208
COG function: function code Q; Predicted thioesterase involved in non-ribosomal peptide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33298; Mature: 33167
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIVRLFTLPGAGSSAIMYYKWIPIIGKQIRLSPLEIPGRGIKEREKKAVSRRNLIDLLF CCEEEEEEECCCCCCEEEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH EDVKLKLKNDEEYMILGNSASSIIAIDLCRLIETYEFKRPKHIFIAVEPPPDILKNRKKM HHHEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHH LEDPKKKNFVKSVFEKYFLDDLITKEELNELLSVFLNIVYNNREKILDFSAEDMYKEIYG HCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHC DIKMIKGKKYKALEFALEHIKLFIEDEKITSEDEISLLPINVDLTVFGATNDEVASELEL CEEEECCCCHHHHHHHHHHHHEEEECCCCCCCCCEEEEEEEEEEEEEECCCHHHHHHHHH MKWKEYTCAKFELYMVEGDHLILFNNNETVLQKIQEKTETILKKI HHHCCCCEEEEEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SIVRLFTLPGAGSSAIMYYKWIPIIGKQIRLSPLEIPGRGIKEREKKAVSRRNLIDLLF CEEEEEEECCCCCCEEEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH EDVKLKLKNDEEYMILGNSASSIIAIDLCRLIETYEFKRPKHIFIAVEPPPDILKNRKKM HHHEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHH LEDPKKKNFVKSVFEKYFLDDLITKEELNELLSVFLNIVYNNREKILDFSAEDMYKEIYG HCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHC DIKMIKGKKYKALEFALEHIKLFIEDEKITSEDEISLLPINVDLTVFGATNDEVASELEL CEEEECCCCHHHHHHHHHHHHEEEECCCCCCCCCEEEEEEEEEEEEEECCCHHHHHHHHH MKWKEYTCAKFELYMVEGDHLILFNNNETVLQKIQEKTETILKKI HHHCCCCEEEEEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA