| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is pps [H]
Identifier: 153930898
GI number: 153930898
Start: 2638139
End: 2640616
Strand: Reverse
Name: pps [H]
Synonym: CLB_2523
Alternate gene names: 153930898
Gene position: 2640616-2638139 (Counterclockwise)
Preceding gene: 153931739
Following gene: 153932640
Centisome position: 68.35
GC content: 28.53
Gene sequence:
>2478_bases ATGGACACTAAAAATATTATTGGTATAAAAGATGCACGGGAAAATCAAATTGATATTGTAGGAGGAAAAGGGGCTAATTT AGGACTAATGATTTCATGTGGCATTCCTGTTCCAGATGGCTTTATTGTAACGGCTAATGCATATAAAAATTTTTTAAAAA GTAATGGTATATTAGAAATAATAGAACAAAAAATTAGTAATATAGATAAAGAAACTTTATCTATAAAGGATAAAACTGAA GAGATAAGAAATTTAATTTTAAAAGCTGAGTTCCCAAAGGACTTAAAAGAAGATATATTGAGTAGATTTAATAAATTTAA GAGACCTATTCACTTAGCAGTAAGATCTTCGGCAACAGCCGAAGATTTACCGGAAGCAAGTTTTGCAGGGCAACAAGAGA CATATTTGAATATTATGAACAAGGAAGATTTATTTGTATCAATAAAAAAGTGCTTTTCTTCTCTTTGGAGCATTAGGGCA TTTTCATATAGAACTAATAATGGATATGATCATTTGAATGTTGGTATAGCAGTTGTTATTCAAGAAATGATAGAATCTGA TATTTCTGGAGTTATGTTTACATCTAACCCAATAACCGCTGAAAAGGAAATAGTGATAGATGCATCTTATAATTTGGGAG AAGCCATAGTATCAGGAAAAGTTACGCCAGATAATTATGTTCTTGATAAAAATGGAGAAGAAATAGCTTTCACTCTTGGA AGTAAGGAAATTTCAGTTGTATATTCAGATAAAGGAACTGTGGTTGTAAATAATTCTTCTGATATAAGAGAAAGAAGATG TCTTCATAATGAAAATTTAAGAGAATTATTTGATATGGCCTTAAAGATAGAAGGCTTATATAAAAAAACTATGGATATAG AATGGGCAATTAAAAATAAAAAAGTATATATTCTTCAGGCACGCCCAATTACAACTATAAAGAAAAAACAGAATAAAAAT ACCAGAAAGCAGTACTCACAAAAAGAAAAAAAGTATTTAAATAATATGATAGAACATTTTCCAGTTGCATGTTATCCACT AGATTATGAAATTGCAATGATACTTCAAAATATGAAATTTGAACTTTTTAAGGAGGTAGGACTGAAAATAGAGAGTCCTA TATATATGGATAATATGGGTATAATCCATATGAATAAAATTAGGTGGAAAGTAAATCCAAAAATTTTACGCTTTTTTAAA GTTTATTATGAATATAAAAATAATGAGAAGAATGTTGAATATGGAGAAAAGATTTTAGATTCTTGTAAAAAAGAACTCAA AGTAATAGAACAAAATATAAATGAAAATAGTTATAAATTTTCTCTTCGTGATATAGATAAATATATGAGTGATATTATTT CAATTCATGAAAGAATTTCTTTTGCAAGGTTTAGATATTTTCTTTTCCCATCTGTTATTATTGGCGAAAAACTTGATAAA GAACTTAAAGCTATAAATCCAAATTATACAGAGTATGATCTCTTATCAGATTTAGATTATGTAACAGTAGATATGAATAA GGATATTGATATTTTATCAAAAACTTTATCAAGAAATGAAGAACTAATAAAGGATTTAATAAAAGGGGCAAGCTATGCAT TTATAAAAGAAAAATATGATTATGATTCAATAGAAATAAAAGAGTTTTTTAATAAATATGGTTGGAAGTCTAATTATTGT TGTATTCCATTCTCTTCATCTTCTTGGAATGAGGAACCAAATAGATTTATAAAACTTCTTAAAATAACCATTTCAGAGAA TAAAGAAAATGAAGAAAATAAATCTGGAAAGTACATGGGTATATTGAAAGAGTTGGAGGAAAGTAAAGGTAAAAAAAGAT TTAAGAAAACAATGGGAGATATTACTTATTATAGACTAGCTCATGTTAGACGTGAGGAAAGTCAATATCTTTGGGAAACA GGATTTGGATTATTGAGGTTGCTTTTAAAACAAATAGAAGATTTGTTAAATACAAAGAAAGAAGATTTGCTATATTTGTC TTTTCAAGAGTTAAGAAAAGTAATAGCTATTGGTAAGTTAGAGCATGAATATAGAGAATTAATTTCATATAGGAAAAATC ACCGTAAGGAGACTGAAGAACTTTGGGAGCAGATGGCATTAGATGCCTTTTATGATAATGAGAAGAATATTTTCAGGGGA ATAAGCGGAAGTTCAGGTGTAGTGAGAGGTAGAGTTTGTATTATAAAAAATCATACTGAATTTGATAAACTGAAAGAAGA TAATATTCTTATATGTCCATATACTGATCCTGAGTGGACCCCTCTTTTTAAAATAGCAAAAGGAGTTGTTTCAGATACAG GTGGAGCTTTATCGCACGCAGCTATTGTTGCACGTGAATATAATATCCCAGCGGTATTGGGTGTTGGAAATGCCACAGTA AATTTATCGGATGGGGAATATATATTATTAGACGGAAATAATGGTATTGTAAAGCGATTATCAGAGGAAATAATATGA
Upstream 100 bases:
>100_bases GATGCTACAGTAGATCTTTATAAATCAATATCTCTGAATGAAATAGTTGAGAATATTGAAAAGACTAAAATTGATTTAGA AGATATAGTGGGGTGAAAAA
Downstream 100 bases:
>100_bases CAAAGAATATAGAAGACAAACAGGGAAAATTTGAAGAACTTACTAAGACGCCAATTTCCAAATTAATATTGAAAATGGCT ATACCGTCTATAATGGCAAT
Product: putative phosphoenolpyruvate synthase
Products: AMP; phosphoenolpyruvate; phosphate
Alternate protein names: Putative PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 825; Mature: 825
Protein sequence:
>825_residues MDTKNIIGIKDARENQIDIVGGKGANLGLMISCGIPVPDGFIVTANAYKNFLKSNGILEIIEQKISNIDKETLSIKDKTE EIRNLILKAEFPKDLKEDILSRFNKFKRPIHLAVRSSATAEDLPEASFAGQQETYLNIMNKEDLFVSIKKCFSSLWSIRA FSYRTNNGYDHLNVGIAVVIQEMIESDISGVMFTSNPITAEKEIVIDASYNLGEAIVSGKVTPDNYVLDKNGEEIAFTLG SKEISVVYSDKGTVVVNNSSDIRERRCLHNENLRELFDMALKIEGLYKKTMDIEWAIKNKKVYILQARPITTIKKKQNKN TRKQYSQKEKKYLNNMIEHFPVACYPLDYEIAMILQNMKFELFKEVGLKIESPIYMDNMGIIHMNKIRWKVNPKILRFFK VYYEYKNNEKNVEYGEKILDSCKKELKVIEQNINENSYKFSLRDIDKYMSDIISIHERISFARFRYFLFPSVIIGEKLDK ELKAINPNYTEYDLLSDLDYVTVDMNKDIDILSKTLSRNEELIKDLIKGASYAFIKEKYDYDSIEIKEFFNKYGWKSNYC CIPFSSSSWNEEPNRFIKLLKITISENKENEENKSGKYMGILKELEESKGKKRFKKTMGDITYYRLAHVRREESQYLWET GFGLLRLLLKQIEDLLNTKKEDLLYLSFQELRKVIAIGKLEHEYRELISYRKNHRKETEELWEQMALDAFYDNEKNIFRG ISGSSGVVRGRVCIIKNHTEFDKLKEDNILICPYTDPEWTPLFKIAKGVVSDTGGALSHAAIVAREYNIPAVLGVGNATV NLSDGEYILLDGNNGIVKRLSEEII
Sequences:
>Translated_825_residues MDTKNIIGIKDARENQIDIVGGKGANLGLMISCGIPVPDGFIVTANAYKNFLKSNGILEIIEQKISNIDKETLSIKDKTE EIRNLILKAEFPKDLKEDILSRFNKFKRPIHLAVRSSATAEDLPEASFAGQQETYLNIMNKEDLFVSIKKCFSSLWSIRA FSYRTNNGYDHLNVGIAVVIQEMIESDISGVMFTSNPITAEKEIVIDASYNLGEAIVSGKVTPDNYVLDKNGEEIAFTLG SKEISVVYSDKGTVVVNNSSDIRERRCLHNENLRELFDMALKIEGLYKKTMDIEWAIKNKKVYILQARPITTIKKKQNKN TRKQYSQKEKKYLNNMIEHFPVACYPLDYEIAMILQNMKFELFKEVGLKIESPIYMDNMGIIHMNKIRWKVNPKILRFFK VYYEYKNNEKNVEYGEKILDSCKKELKVIEQNINENSYKFSLRDIDKYMSDIISIHERISFARFRYFLFPSVIIGEKLDK ELKAINPNYTEYDLLSDLDYVTVDMNKDIDILSKTLSRNEELIKDLIKGASYAFIKEKYDYDSIEIKEFFNKYGWKSNYC CIPFSSSSWNEEPNRFIKLLKITISENKENEENKSGKYMGILKELEESKGKKRFKKTMGDITYYRLAHVRREESQYLWET GFGLLRLLLKQIEDLLNTKKEDLLYLSFQELRKVIAIGKLEHEYRELISYRKNHRKETEELWEQMALDAFYDNEKNIFRG ISGSSGVVRGRVCIIKNHTEFDKLKEDNILICPYTDPEWTPLFKIAKGVVSDTGGALSHAAIVAREYNIPAVLGVGNATV NLSDGEYILLDGNNGIVKRLSEEII >Mature_825_residues MDTKNIIGIKDARENQIDIVGGKGANLGLMISCGIPVPDGFIVTANAYKNFLKSNGILEIIEQKISNIDKETLSIKDKTE EIRNLILKAEFPKDLKEDILSRFNKFKRPIHLAVRSSATAEDLPEASFAGQQETYLNIMNKEDLFVSIKKCFSSLWSIRA FSYRTNNGYDHLNVGIAVVIQEMIESDISGVMFTSNPITAEKEIVIDASYNLGEAIVSGKVTPDNYVLDKNGEEIAFTLG SKEISVVYSDKGTVVVNNSSDIRERRCLHNENLRELFDMALKIEGLYKKTMDIEWAIKNKKVYILQARPITTIKKKQNKN TRKQYSQKEKKYLNNMIEHFPVACYPLDYEIAMILQNMKFELFKEVGLKIESPIYMDNMGIIHMNKIRWKVNPKILRFFK VYYEYKNNEKNVEYGEKILDSCKKELKVIEQNINENSYKFSLRDIDKYMSDIISIHERISFARFRYFLFPSVIIGEKLDK ELKAINPNYTEYDLLSDLDYVTVDMNKDIDILSKTLSRNEELIKDLIKGASYAFIKEKYDYDSIEIKEFFNKYGWKSNYC CIPFSSSSWNEEPNRFIKLLKITISENKENEENKSGKYMGILKELEESKGKKRFKKTMGDITYYRLAHVRREESQYLWET GFGLLRLLLKQIEDLLNTKKEDLLYLSFQELRKVIAIGKLEHEYRELISYRKNHRKETEELWEQMALDAFYDNEKNIFRG ISGSSGVVRGRVCIIKNHTEFDKLKEDNILICPYTDPEWTPLFKIAKGVVSDTGGALSHAAIVAREYNIPAVLGVGNATV NLSDGEYILLDGNNGIVKRLSEEII
Specific function: Might catalyze the phosphorylation of pyruvate to phosphoenolpyruvate (Potential) [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=356, Percent_Identity=35.6741573033708, Blast_Score=196, Evalue=6e-51, Organism=Caenorhabditis elegans, GI17564524, Length=896, Percent_Identity=26.5625, Blast_Score=196, Evalue=4e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR002192 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF01326 PPDK_N [H]
EC number: 2.7.9.2
Molecular weight: Translated: 95435; Mature: 95435
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTKNIIGIKDARENQIDIVGGKGANLGLMISCGIPVPDGFIVTANAYKNFLKSNGILEI CCCCCEEECCCCCCCCEEEEECCCCCEEEEEECCCCCCCCEEEECHHHHHHHHCCCHHHH IEQKISNIDKETLSIKDKTEEIRNLILKAEFPKDLKEDILSRFNKFKRPIHLAVRSSATA HHHHHHCCCHHHEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCH EDLPEASFAGQQETYLNIMNKEDLFVSIKKCFSSLWSIRAFSYRTNNGYDHLNVGIAVVI HHCCCCCCCCCCHHHHEECCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHH QEMIESDISGVMFTSNPITAEKEIVIDASYNLGEAIVSGKVTPDNYVLDKNGEEIAFTLG HHHHHHCCCCEEEECCCCCCCCEEEEECCCCCCHHHHCCCCCCCCEEECCCCCEEEEEEC SKEISVVYSDKGTVVVNNSSDIRERRCLHNENLRELFDMALKIEGLYKKTMDIEWAIKNK CCEEEEEEECCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECC KVYILQARPITTIKKKQNKNTRKQYSQKEKKYLNNMIEHFPVACYPLDYEIAMILQNMKF EEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHH ELFKEVGLKIESPIYMDNMGIIHMNKIRWKVNPKILRFFKVYYEYKNNEKNVEYGEKILD HHHHHHCCEECCCEEECCCCEEEEEEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHH SCKKELKVIEQNINENSYKFSLRDIDKYMSDIISIHERISFARFRYFLFPSVIIGEKLDK HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELKAINPNYTEYDLLSDLDYVTVDMNKDIDILSKTLSRNEELIKDLIKGASYAFIKEKYD HHHHCCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHCCCCEEEEHHCCC YDSIEIKEFFNKYGWKSNYCCIPFSSSSWNEEPNRFIKLLKITISENKENEENKSGKYMG CCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHEEEECCCCCCCCCCCCHHHH ILKELEESKGKKRFKKTMGDITYYRLAHVRREESQYLWETGFGLLRLLLKQIEDLLNTKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH EDLLYLSFQELRKVIAIGKLEHEYRELISYRKNHRKETEELWEQMALDAFYDNEKNIFRG HHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHCC ISGSSGVVRGRVCIIKNHTEFDKLKEDNILICPYTDPEWTPLFKIAKGVVSDTGGALSHA CCCCCCEEEEEEEEEECCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHH AIVAREYNIPAVLGVGNATVNLSDGEYILLDGNNGIVKRLSEEII HHEEEECCCCEEEECCCEEEEECCCCEEEEECCCHHHHHHHHHCC >Mature Secondary Structure MDTKNIIGIKDARENQIDIVGGKGANLGLMISCGIPVPDGFIVTANAYKNFLKSNGILEI CCCCCEEECCCCCCCCEEEEECCCCCEEEEEECCCCCCCCEEEECHHHHHHHHCCCHHHH IEQKISNIDKETLSIKDKTEEIRNLILKAEFPKDLKEDILSRFNKFKRPIHLAVRSSATA HHHHHHCCCHHHEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCH EDLPEASFAGQQETYLNIMNKEDLFVSIKKCFSSLWSIRAFSYRTNNGYDHLNVGIAVVI HHCCCCCCCCCCHHHHEECCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHH QEMIESDISGVMFTSNPITAEKEIVIDASYNLGEAIVSGKVTPDNYVLDKNGEEIAFTLG HHHHHHCCCCEEEECCCCCCCCEEEEECCCCCCHHHHCCCCCCCCEEECCCCCEEEEEEC SKEISVVYSDKGTVVVNNSSDIRERRCLHNENLRELFDMALKIEGLYKKTMDIEWAIKNK CCEEEEEEECCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECC KVYILQARPITTIKKKQNKNTRKQYSQKEKKYLNNMIEHFPVACYPLDYEIAMILQNMKF EEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHH ELFKEVGLKIESPIYMDNMGIIHMNKIRWKVNPKILRFFKVYYEYKNNEKNVEYGEKILD HHHHHHCCEECCCEEECCCCEEEEEEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHH SCKKELKVIEQNINENSYKFSLRDIDKYMSDIISIHERISFARFRYFLFPSVIIGEKLDK HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELKAINPNYTEYDLLSDLDYVTVDMNKDIDILSKTLSRNEELIKDLIKGASYAFIKEKYD HHHHCCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHCCCCEEEEHHCCC YDSIEIKEFFNKYGWKSNYCCIPFSSSSWNEEPNRFIKLLKITISENKENEENKSGKYMG CCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHEEEECCCCCCCCCCCCHHHH ILKELEESKGKKRFKKTMGDITYYRLAHVRREESQYLWETGFGLLRLLLKQIEDLLNTKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH EDLLYLSFQELRKVIAIGKLEHEYRELISYRKNHRKETEELWEQMALDAFYDNEKNIFRG HHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHCC ISGSSGVVRGRVCIIKNHTEFDKLKEDNILICPYTDPEWTPLFKIAKGVVSDTGGALSHA CCCCCCEEEEEEEEEECCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHH AIVAREYNIPAVLGVGNATVNLSDGEYILLDGNNGIVKRLSEEII HHEEEECCCCEEEECCCEEEEECCCCEEEEECCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Mg2+; Mn2+ [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 10.5 {phosphate}} 0.083 {pyruvate}} 0.028 {ATP}} [C]
Substrates: ATP; pyruvate; H2O
Specific reaction: ATP + pyruvate + H2O = AMP + phosphoenolpyruvate + phosphate
General reaction: Phospho group transfer [C]
Inhibitor: 2-Oxoglutarate; 3-Phosphoglyceraldehyde; 5'-Adenylyl methylen ediphosphonate; ADP; ADP glucose; AMP; ATP; Ca2+; F-; Iodoacetate; Malate; Mg2+; Mn2+; Oxalacetate; PCMB; Phosphoenolpyruvate; Sulfhydryl reagents [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 7704256 [H]