Definition | Actinobacillus succinogenes 130Z chromosome, complete genome. |
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Accession | NC_009655 |
Length | 2,319,663 |
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The map label for this gene is ligA
Identifier: 152979719
GI number:
Start: 2273620
End: 2275638
Strand: Reverse
Name: ligA
Synonym: Asuc_2067
Alternate gene names: NA
Gene position: NA
Preceding gene: 152979720
Following gene: 152979713
Centisome position: NA
GC content: NA
Gene sequence:
>2019_bases ATGACCGATATTCAAAACCAAATTAATCAGTTGCGTAACACCTTACGTCATCATGAATACCAATATCACGTGTTGGATAA TCCTGAAATTCCGGACAGCGAATATGATCGTCTGTTCCACCGGTTGAAAGCCTTAGAGCAGCAACACCCCGAATTGATTA GCGCCGATTCGCCGACTCAACGGGTCGGGGCGAAGCCGTTGGCGGGATTTGCTCAAATTACCCATGAATTGCCGATGTTA TCGCTGGATAACGTTTTTTCCGACGAAGAGTTTTACGCTTTTGTGAAACGGATTCAGGAACGTCTGATAACTTTGCCCGA TAATCTGGAATTTTGTTGCGAACCGAAACTGGACGGTTTAGCGGTGAGTATTTTGTACGAAAACGGCAGATTGGTTCAGG CGGCGACCCGCGGTGACGGTACCACGGGCGAAGACATTACCTTGAACATCCGCACTATACGCAATATTCCGCTGCAGTTG CTGACGGATAATCCTCCGGTTCGGCTTGAGGTGCGGGGTGAGGTGTTTATGCCGCAGGAGGGATTCGACAGGCTGAATGA AGCCGCATTGGCCAGAGGCGAAAAAACCTTTGCCAATCCGCGCAATGCAGCGGCGGGTTCGTTGCGTCAGCTCGACCCGA AAATTACCAGTCAGCGTCCGTTGGTGTGGAATGCGTACAGTATCGGCATTGCGGAAGGGGCGGATTTACCGCCGACCCAT TATGAACGGTTGCAATGGTTGAAATCTATCGGTATTCCGGTGAACGGGGAAATTCGCTTGTGTCGCGGTGCCGAAAACGT GCTGAAATTTTACCGCACTATTCAGGAAAAGCGCCCGGAGCTGGGATATGATATTGACGGCACCGTGTTAAAAGTGAACG AGATAGCGTTACAGGAACGCCTCGGTTTTATTTCCAAAGCACCGCGTTGGGCGATAGCCTATAAATTCCCGGCACAGGAA GAAATGACGGTACTGAACGATGTGGAATTTCAAGTGGGACGCACGGGCGCTATTACGCCGGTGGCGAAACTGCAACCGGT TTTTGTCGCGGGGGTGACGGTCAGCAACGCTACGCTGCATAACGGCGATGAGATCGCTCGATTGGATATCGCCATTGGCG ATACGGTCATCGTTCGTCGCGCCGGCGATGTGATTCCGCAAATTATCGGCGTGGTGCATGATCGCCGTCCGCCCAATGCC GAACCGATTATTTTCCCGACCCTTTGTCCGGTGTGCCATTCCGCCATTGTCCGTATTGAAGGTGAGGCTGTGGCGCGTTG TACCGGCGGTTTGTTCTGCGACGCACAACGGAAAGAATCTTTAAAACACTTTGTTTCCCGTCGGGCGATGGATATTGACG GCGTAGGGGCGAAACTTATAGAGCAGCTGGTCGACCGGGAATTGATTCGCACCCCGGCGGATCTGTTCAAATTGGATTTA ATCACATTGATGCGACTTGAACGCATGGGTGAAAAATCCGCACAAAAAGCGTTGGACAGTCTGGAAAAAGCCAAAAAAAC CACACTTGCCCGTTTTATTTTTGCTCTTGGTATTCGCGAAGTCGGCGAAGCGACAGCGTTAAATCTGGCAAATTTCTTTA AAAATCTGACCGCACTTCAAACCGCGGATTTAGAACAGTTGCAGGCGGTGTCCGACGTGGGCGAAGTGGTGGCGAACCGC ATTTACGTCTTCTGGCGTGAACAGCATAATATCGATGTGGTGAATGATCTGATTGCGCAAGGCGTACATTGGGACGACGT AGAAGAAAAACAGGTAAATGAAAATCCGTTTAAAGAAAAAACCGTCGTACTTACCGGCACGCTGAGCCAAATGGGGCGTA ATGAAGCCAAAGCTTTGTTGCAGCAAATGGGGGCTAAAGTGGCCGGCAGCGTATCAGCCAAAACCCATATTGTGATCGCG GGAGATTCCGCCGGTTCTAAATTAAGCAAAGCGCAGGACTTAGGCGTTGCAGTGATGAGCGAGGCGGAATTTCTCGAAAT TGTAAATAGTTTTTCCTAA
Upstream 100 bases:
>100_bases CATATTTAGCCCGCGTATAGTTGTAAAAATAATTAAAAAATAACCGCACTTTACAATCGACGGGATTGAAAGTGCGGTTT ATTTTGCCAGAGATTTTAAA
Downstream 100 bases:
>100_bases CATATCAGTAGGTTAGATAAAATAAAAAGTGCGGTCGAAAAATTTAACGTTTTTTGACCGCACTTTTTTATAATGATGAT TAATTGACGACTTGTTGCAT
Product: NAD-dependent DNA ligase LigA
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>672_residues MTDIQNQINQLRNTLRHHEYQYHVLDNPEIPDSEYDRLFHRLKALEQQHPELISADSPTQRVGAKPLAGFAQITHELPML SLDNVFSDEEFYAFVKRIQERLITLPDNLEFCCEPKLDGLAVSILYENGRLVQAATRGDGTTGEDITLNIRTIRNIPLQL LTDNPPVRLEVRGEVFMPQEGFDRLNEAALARGEKTFANPRNAAAGSLRQLDPKITSQRPLVWNAYSIGIAEGADLPPTH YERLQWLKSIGIPVNGEIRLCRGAENVLKFYRTIQEKRPELGYDIDGTVLKVNEIALQERLGFISKAPRWAIAYKFPAQE EMTVLNDVEFQVGRTGAITPVAKLQPVFVAGVTVSNATLHNGDEIARLDIAIGDTVIVRRAGDVIPQIIGVVHDRRPPNA EPIIFPTLCPVCHSAIVRIEGEAVARCTGGLFCDAQRKESLKHFVSRRAMDIDGVGAKLIEQLVDRELIRTPADLFKLDL ITLMRLERMGEKSAQKALDSLEKAKKTTLARFIFALGIREVGEATALNLANFFKNLTALQTADLEQLQAVSDVGEVVANR IYVFWREQHNIDVVNDLIAQGVHWDDVEEKQVNENPFKEKTVVLTGTLSQMGRNEAKALLQQMGAKVAGSVSAKTHIVIA GDSAGSKLSKAQDLGVAVMSEAEFLEIVNSFS
Sequences:
NA
Specific function: NA
COG id: COG0272
COG function: function code L; NAD-dependent DNA ligase (contains BRCT domain type II)
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA