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The map label for this gene is ydjC [C]

Identifier: 152977420

GI number: 152977420

Start: 3807143

End: 3807850

Strand: Reverse

Name: ydjC [C]

Synonym: Bcer98_3750

Alternate gene names: 152977420

Gene position: 3807850-3807143 (Counterclockwise)

Preceding gene: 152977421

Following gene: 152977419

Centisome position: 93.17

GC content: 39.27

Gene sequence:

>708_bases
ATGATTCAATTAATTGTAAACGCAGATGACTTCGGTCTTTCAGAAGGGACAAATTACGGGATTATTCATGGTCATATAAA
TGGAATTGTGAATTCAACAACAATGATGATGAACATGCCAGCAGTAGAGCATGCGGTTCGTTTAGCAAATGAATATCCAT
CATTAGGAGTAGGGGTACATCTCGTTTTAACTGCTGGAAAGCCGCTCCTTACGAACGTTCCATCCCTCGTAGATGAAAAA
ACGGGATTATTTCATAAGCAAAGTATTGTAAGAGAAGAGAAATTTAATCCAAAAGAGGTTGAGAGAGAATGGACTGCCCA
AATTGAAAAGTTTTTATCATTTGGATTACGACTCACGCATCTAGATAGTCATCATCATATACAGAGTTTGCCCCTCTTAC
ATGATGTCATGAAGCGATTGGCAGCTAAATATAACGTGCCCGTTCGGCGCTGCGAAGGGGAAAGAGCGGTGTTTCCATTT
TCAGATGTGTTTTTTTGTGACTTTTATAGCGCTGGTGTGCAGAAAGAATATTTTCTAAAATTAAAAGAACGTGTGAAAGA
TGAGCAAACTGTGGAAGTTATGGTACATCCAGCCTATATTGATCCGGAGCTGATGAAGCGATCTTCTTACGTGATGGACC
GCGTAAAAGAACTGCAAATTTTAACGGAGACTCGCTTACCAGAAGGAATAGAGCTTGTAAAATTTTAA

Upstream 100 bases:

>100_bases
AAGCGCATAAAGAACATCTTCCGCAGTTCTTTAAAAAAATAGAGAAATAAAAGCGGTGCTTACTAAGCCCGCTTTTTTTC
TTGAATCAGGAGGGGACAGG

Downstream 100 bases:

>100_bases
GAATGAAAAAAGGCGGCTTCATAAAAGAAGTCGTCTTTTTTCAAAGGATTATCTAAAGAAAATGAAAATTTAAGTGCGTG
ATATAAGGCGGGTCGTTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MIQLIVNADDFGLSEGTNYGIIHGHINGIVNSTTMMMNMPAVEHAVRLANEYPSLGVGVHLVLTAGKPLLTNVPSLVDEK
TGLFHKQSIVREEKFNPKEVEREWTAQIEKFLSFGLRLTHLDSHHHIQSLPLLHDVMKRLAAKYNVPVRRCEGERAVFPF
SDVFFCDFYSAGVQKEYFLKLKERVKDEQTVEVMVHPAYIDPELMKRSSYVMDRVKELQILTETRLPEGIELVKF

Sequences:

>Translated_235_residues
MIQLIVNADDFGLSEGTNYGIIHGHINGIVNSTTMMMNMPAVEHAVRLANEYPSLGVGVHLVLTAGKPLLTNVPSLVDEK
TGLFHKQSIVREEKFNPKEVEREWTAQIEKFLSFGLRLTHLDSHHHIQSLPLLHDVMKRLAAKYNVPVRRCEGERAVFPF
SDVFFCDFYSAGVQKEYFLKLKERVKDEQTVEVMVHPAYIDPELMKRSSYVMDRVKELQILTETRLPEGIELVKF
>Mature_235_residues
MIQLIVNADDFGLSEGTNYGIIHGHINGIVNSTTMMMNMPAVEHAVRLANEYPSLGVGVHLVLTAGKPLLTNVPSLVDEK
TGLFHKQSIVREEKFNPKEVEREWTAQIEKFLSFGLRLTHLDSHHHIQSLPLLHDVMKRLAAKYNVPVRRCEGERAVFPF
SDVFFCDFYSAGVQKEYFLKLKERVKDEQTVEVMVHPAYIDPELMKRSSYVMDRVKELQILTETRLPEGIELVKF

Specific function: Unknown

COG id: COG3394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0249 family [H]

Homologues:

Organism=Escherichia coli, GI1788028, Length=236, Percent_Identity=38.135593220339, Blast_Score=154, Evalue=6e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002509
- InterPro:   IPR006879
- InterPro:   IPR022948 [H]

Pfam domain/function: PF04794 YdjC [H]

EC number: NA

Molecular weight: Translated: 26907; Mature: 26907

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQLIVNADDFGLSEGTNYGIIHGHINGIVNSTTMMMNMPAVEHAVRLANEYPSLGVGVH
CEEEEEECCCCCCCCCCCEEEEEECCCCHHCCCEEEEECHHHHHHHHHHHCCCCCCCCEE
LVLTAGKPLLTNVPSLVDEKTGLFHKQSIVREEKFNPKEVEREWTAQIEKFLSFGLRLTH
EEEECCCCHHHCCHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEEEE
LDSHHHIQSLPLLHDVMKRLAAKYNVPVRRCEGERAVFPFSDVFFCDFYSAGVQKEYFLK
ECCCCHHHHCHHHHHHHHHHHHHCCCCCEECCCCCEECCCCHHHHHHHHHHCCCHHHHHH
LKERVKDEQTVEVMVHPAYIDPELMKRSSYVMDRVKELQILTETRLPEGIELVKF
HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCC
>Mature Secondary Structure
MIQLIVNADDFGLSEGTNYGIIHGHINGIVNSTTMMMNMPAVEHAVRLANEYPSLGVGVH
CEEEEEECCCCCCCCCCCEEEEEECCCCHHCCCEEEEECHHHHHHHHHHHCCCCCCCCEE
LVLTAGKPLLTNVPSLVDEKTGLFHKQSIVREEKFNPKEVEREWTAQIEKFLSFGLRLTH
EEEECCCCHHHCCHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEEEE
LDSHHHIQSLPLLHDVMKRLAAKYNVPVRRCEGERAVFPFSDVFFCDFYSAGVQKEYFLK
ECCCCHHHHCHHHHHHHHHHHHHCCCCCEECCCCCEECCCCHHHHHHHHHHCCCHHHHHH
LKERVKDEQTVEVMVHPAYIDPELMKRSSYVMDRVKELQILTETRLPEGIELVKF
HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721630 [H]