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The map label for this gene is cggR [H]

Identifier: 152977358

GI number: 152977358

Start: 3743224

End: 3744252

Strand: Reverse

Name: cggR [H]

Synonym: Bcer98_3683

Alternate gene names: 152977358

Gene position: 3744252-3743224 (Counterclockwise)

Preceding gene: 152977359

Following gene: 152977357

Centisome position: 91.61

GC content: 41.4

Gene sequence:

>1029_bases
ATGCGCTCATGGATTCAGAACATGAAAAAATTATTACCCGATTTGCTACCAGTTATGCAAACAAGAATGCAAATTCTTCA
GCACATTCGTCTCATGCAGCCGATTGGAAGAAGAAATTTATCTGCAAGTCTTAGCATGACAGAACGAGTATTGCGAAGTG
AAGTACAAGTTTTGAAAGAAAAAAACTTAGTTCACGTCGCTTCTTCTGGGATGACTTTAACAGAAGAAGGAGCAGCTGTG
GTTCTTGCTTTGGAAGACTTTATGAAAGAAATTTCCGGGTTAAAGGTTTTAGAAAAACAACTTAAGGAAACATTAGACTT
GGATGAAGTTTTCGTTGTCCCTGGTGATAGTGATGAATCACCTTGGGTCAAACTGGAGATGGGCCGTGCTTGTGTAACTT
GTATAAAAGACCGTCTGGAGGCAAATAATATCGTTGCTGTAGCTGGAGGAACAACGCTAGCTGCCGTTGCGGACATGATG
CAACTAGACTGCAAAGATTTACATATGCTGTTTGTCCCAGCGCGTGGCGGAATTGGAGAAGGGGTCGAGTTAGAGGCCAA
TACCATTTGTGCGAAGATGGCACAAAATACGATGAGCAATTATCGCTTATTGTATGTTCCGGATCAAGTGAGTAGCGAAG
CGTATGCATCTATTGTAACGGAACCTTCCGTGAAAGAAGTTCTTGAGTTGATTCGCTCTTCCAATATCGTCATTCATGGA
ATAGGTGATGCGTTAACAATGGCACGTCGCAGAAGTACTTCAGAAGCAGATTGGTTAAAAATTAAAGACAATGAAGCAGT
TGGCGAAGCTTTCGGTTATTACTTCAATGAACAAGGTAATGTCGTTCATAAGGTACAAACAGTCGGCATGCAATTAAAAG
ATTTACAACATGTATCCCATGTTGTCGCCGTCGCTGGAGGTTCTTCAAAAGCAAAAGCGATACAGGCTGTAATTAAACAA
GGGCACACTTCAATTTTGATTACAGATGAAGGTGCAGCAAAACAGTTAACAAAGGGTACCCCCCTTTAA

Upstream 100 bases:

>100_bases
AGCAGGGATTATTTTTTTAACTCATGTGGGACACAAAATGTCACTGCGGGACATAAAGCGACCACGTGGTAAGTGAACCA
ATGTAGTGAGGAGAAATGAT

Downstream 100 bases:

>100_bases
TATAATCCCCCAAGGAGGAAATTCAAATGACAGTTAAAATTGGTATTAATGGATTTGGACGTATCGGACGTAACGTATTC
CGTGCAGCTCTTAACAACCC

Product: DeoR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MRSWIQNMKKLLPDLLPVMQTRMQILQHIRLMQPIGRRNLSASLSMTERVLRSEVQVLKEKNLVHVASSGMTLTEEGAAV
VLALEDFMKEISGLKVLEKQLKETLDLDEVFVVPGDSDESPWVKLEMGRACVTCIKDRLEANNIVAVAGGTTLAAVADMM
QLDCKDLHMLFVPARGGIGEGVELEANTICAKMAQNTMSNYRLLYVPDQVSSEAYASIVTEPSVKEVLELIRSSNIVIHG
IGDALTMARRRSTSEADWLKIKDNEAVGEAFGYYFNEQGNVVHKVQTVGMQLKDLQHVSHVVAVAGGSSKAKAIQAVIKQ
GHTSILITDEGAAKQLTKGTPL

Sequences:

>Translated_342_residues
MRSWIQNMKKLLPDLLPVMQTRMQILQHIRLMQPIGRRNLSASLSMTERVLRSEVQVLKEKNLVHVASSGMTLTEEGAAV
VLALEDFMKEISGLKVLEKQLKETLDLDEVFVVPGDSDESPWVKLEMGRACVTCIKDRLEANNIVAVAGGTTLAAVADMM
QLDCKDLHMLFVPARGGIGEGVELEANTICAKMAQNTMSNYRLLYVPDQVSSEAYASIVTEPSVKEVLELIRSSNIVIHG
IGDALTMARRRSTSEADWLKIKDNEAVGEAFGYYFNEQGNVVHKVQTVGMQLKDLQHVSHVVAVAGGSSKAKAIQAVIKQ
GHTSILITDEGAAKQLTKGTPL
>Mature_342_residues
MRSWIQNMKKLLPDLLPVMQTRMQILQHIRLMQPIGRRNLSASLSMTERVLRSEVQVLKEKNLVHVASSGMTLTEEGAAV
VLALEDFMKEISGLKVLEKQLKETLDLDEVFVVPGDSDESPWVKLEMGRACVTCIKDRLEANNIVAVAGGTTLAAVADMM
QLDCKDLHMLFVPARGGIGEGVELEANTICAKMAQNTMSNYRLLYVPDQVSSEAYASIVTEPSVKEVLELIRSSNIVIHG
IGDALTMARRRSTSEADWLKIKDNEAVGEAFGYYFNEQGNVVHKVQTVGMQLKDLQHVSHVVAVAGGSSKAKAIQAVIKQ
GHTSILITDEGAAKQLTKGTPL

Specific function: Unknown

COG id: COG2390

COG function: function code K; Transcriptional regulator, contains sigma factor-related N-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sorC transcriptional regulatory family [H]

Homologues:

Organism=Escherichia coli, GI1787791, Length=252, Percent_Identity=26.984126984127, Blast_Score=80, Evalue=3e-16,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007324
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04198 Sugar-bind [H]

EC number: NA

Molecular weight: Translated: 37465; Mature: 37465

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSWIQNMKKLLPDLLPVMQTRMQILQHIRLMQPIGRRNLSASLSMTERVLRSEVQVLKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
KNLVHVASSGMTLTEEGAAVVLALEDFMKEISGLKVLEKQLKETLDLDEVFVVPGDSDES
CCEEEEECCCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC
PWVKLEMGRACVTCIKDRLEANNIVAVAGGTTLAAVADMMQLDCKDLHMLFVPARGGIGE
CEEEEECCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCCC
GVELEANTICAKMAQNTMSNYRLLYVPDQVSSEAYASIVTEPSVKEVLELIRSSNIVIHG
CCEECHHHHHHHHHHHHHHCCEEEEECCHHCHHHHHHHHCCCCHHHHHHHHHCCCEEEEE
IGDALTMARRRSTSEADWLKIKDNEAVGEAFGYYFNEQGNVVHKVQTVGMQLKDLQHVSH
CCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHH
VVAVAGGSSKAKAIQAVIKQGHTSILITDEGAAKQLTKGTPL
HHHCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCCCC
>Mature Secondary Structure
MRSWIQNMKKLLPDLLPVMQTRMQILQHIRLMQPIGRRNLSASLSMTERVLRSEVQVLKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
KNLVHVASSGMTLTEEGAAVVLALEDFMKEISGLKVLEKQLKETLDLDEVFVVPGDSDES
CCEEEEECCCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC
PWVKLEMGRACVTCIKDRLEANNIVAVAGGTTLAAVADMMQLDCKDLHMLFVPARGGIGE
CEEEEECCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCCC
GVELEANTICAKMAQNTMSNYRLLYVPDQVSSEAYASIVTEPSVKEVLELIRSSNIVIHG
CCEECHHHHHHHHHHHHHHCCEEEEECCHHCHHHHHHHHCCCCHHHHHHHHHCCCEEEEE
IGDALTMARRRSTSEADWLKIKDNEAVGEAFGYYFNEQGNVVHKVQTVGMQLKDLQHVSH
CCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHH
VVAVAGGSSKAKAIQAVIKQGHTSILITDEGAAKQLTKGTPL
HHHCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1452037 [H]