Definition | Bacillus cereus subsp. cytotoxis NVH 391-98, complete genome. |
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Accession | NC_009674 |
Length | 4,087,024 |
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The map label for this gene is pgk [H]
Identifier: 152977356
GI number: 152977356
Start: 3740871
End: 3742055
Strand: Reverse
Name: pgk [H]
Synonym: Bcer98_3681
Alternate gene names: 152977356
Gene position: 3742055-3740871 (Counterclockwise)
Preceding gene: 152977357
Following gene: 152977355
Centisome position: 91.56
GC content: 40.42
Gene sequence:
>1185_bases ATGAACAAAAAATCAATTCGTGACGTAGATTTAAAGGGTAAACGTGTATTTTGCCGCGTTGATTTCAACGTACCTATGAA AGATGGCAAAATTACAGACGAGACTCGTATTCGTGCAGCTCTTCCTACTATTCAATATTTAGTAGAACAAGGTGCGAAGG TTATTTTAGCAAGCCACTTAGGCCGTCCAAAAGGTCAAGTAGTAGAAGAAATGCGTTTAACTCCAGTAGCAGTTCGTTTA GGTGAACTTCTTGGTAAAGACGTGAAAAAAGCGGACGAAGCATTCGGACCAGCTGTACAAGAAATGGTTGCAGCAATGAA CGAAGGCGACATTTTAGTTCTTGAAAACGTTCGTTTCTATGCGGGCGAAGAAAAGAACGATGCAGAACTTGCGAAAGAAT TTGCAGCTCTTGCTGATATCTTCGTAAACGATGCATTCGGTGCAGCTCACCGCGCTCATGCTTCTACAGCAGGGATTGCA GATTACCTACCAGCAGTAGCAGGTTTCTTAATGGAAAAAGAATTAGAAGTACTTGGAAAAGCACTTTCTAATCCAGATCG TCCATTTACAGCAATCATCGGTGGTGCGAAAGTAAAAGATAAAATCGGTGTAATTCGTCATCTATTAGATAAAGTAGATA ACTTAATCATCGGTGGAGGTCTTGCTTACACATTCGTAAAAGCATTAGGTCATGAAATTGGTCTATCTCTATGTGAAGAT GACAAGATTGAACTAGCAAAAGAGTTTATGGCACTTGCAAAAGAAAAAGGTGTAAACTTCTACATGCCAGTTGATGTTGT AATCACTGAGGAATTCTCTGAAACTGCAACAACTAAAATTGTAGATATCGACTCTATCCCATCAAACTGGGAAGGTGTGG ACATCGGACCAAAAACACGTGAAATTTATGCAGATGTAATTAAAAACTCTAAGCTTGTTGTATGGAATGGACCAATGGGT GTATTCGAAATGACTCCATTCTCTAACGGTACAAGAGCAGTAGGACAAGCATTAGCAGATGCAGAAGGTACATACTCTGT TATCGGCGGTGGTGACTCTGCAGCAGCTGTTGAAAAATTCGGCATGGCTGATAAAATGAGCCACATTTCTACTGGCGGCG GTGCGTCATTAGAATTTATGGAAGGTAAAGAACTTCCAGGTGTAGTTTGTCTGAATGACAAATAA
Upstream 100 bases:
>100_bases GGGAGAGGGTTTGTTCCCTCTCTCTTCTTTCGTTTTATAAGCAAATGTGATAAGCTTTTGAATGGGTTTTGTCAATCCTA ACTAGTCGGAGGGAAATCCA
Downstream 100 bases:
>100_bases TTAGCAGCCAAAGAAAAAAGGACGGTGCAAAGCATGCGTAAACCAATTATCGCAGGTAACTGGAAAATGAATAAAACTCT ATCTGAAGCAGTTAGCTTCG
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MNKKSIRDVDLKGKRVFCRVDFNVPMKDGKITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQVVEEMRLTPVAVRL GELLGKDVKKADEAFGPAVQEMVAAMNEGDILVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIA DYLPAVAGFLMEKELEVLGKALSNPDRPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCED DKIELAKEFMALAKEKGVNFYMPVDVVITEEFSETATTKIVDIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMG VFEMTPFSNGTRAVGQALADAEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLNDK
Sequences:
>Translated_394_residues MNKKSIRDVDLKGKRVFCRVDFNVPMKDGKITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQVVEEMRLTPVAVRL GELLGKDVKKADEAFGPAVQEMVAAMNEGDILVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIA DYLPAVAGFLMEKELEVLGKALSNPDRPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCED DKIELAKEFMALAKEKGVNFYMPVDVVITEEFSETATTKIVDIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMG VFEMTPFSNGTRAVGQALADAEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLNDK >Mature_394_residues MNKKSIRDVDLKGKRVFCRVDFNVPMKDGKITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQVVEEMRLTPVAVRL GELLGKDVKKADEAFGPAVQEMVAAMNEGDILVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIA DYLPAVAGFLMEKELEVLGKALSNPDRPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCED DKIELAKEFMALAKEKGVNFYMPVDVVITEEFSETATTKIVDIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMG VFEMTPFSNGTRAVGQALADAEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLNDK
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI4505763, Length=414, Percent_Identity=47.1014492753623, Blast_Score=358, Evalue=4e-99, Organism=Homo sapiens, GI31543397, Length=413, Percent_Identity=46.7312348668281, Blast_Score=348, Evalue=4e-96, Organism=Escherichia coli, GI1789294, Length=398, Percent_Identity=46.9849246231156, Blast_Score=346, Evalue=1e-96, Organism=Caenorhabditis elegans, GI17508823, Length=412, Percent_Identity=47.8155339805825, Blast_Score=365, Evalue=1e-101, Organism=Saccharomyces cerevisiae, GI6319857, Length=412, Percent_Identity=49.7572815533981, Blast_Score=379, Evalue=1e-106, Organism=Drosophila melanogaster, GI17136394, Length=411, Percent_Identity=46.4720194647202, Blast_Score=338, Evalue=5e-93, Organism=Drosophila melanogaster, GI24581203, Length=415, Percent_Identity=46.0240963855422, Blast_Score=336, Evalue=2e-92,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 42392; Mature: 42392
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKSIRDVDLKGKRVFCRVDFNVPMKDGKITDETRIRAALPTIQYLVEQGAKVILASHL CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHC GRPKGQVVEEMRLTPVAVRLGELLGKDVKKADEAFGPAVQEMVAAMNEGDILVLENVRFY CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECEEEE AGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYLPAVAGFLMEKELEVLGK CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH ALSNPDRPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCED HHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCCCCCC DKIELAKEFMALAKEKGVNFYMPVDVVITEEFSETATTKIVDIDSIPSNWEGVDIGPKTR CHHHHHHHHHHHHHHCCCEEEEEEEEEEECCHHCCHHEEEEEECCCCCCCCCCCCCCCHH EIYADVIKNSKLVVWNGPMGVFEMTPFSNGTRAVGQALADAEGTYSVIGGGDSAAAVEKF HHHHHHHCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHH GMADKMSHISTGGGASLEFMEGKELPGVVCLNDK CCHHHHHHCCCCCCCEEEEECCCCCCCEEEECCC >Mature Secondary Structure MNKKSIRDVDLKGKRVFCRVDFNVPMKDGKITDETRIRAALPTIQYLVEQGAKVILASHL CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHC GRPKGQVVEEMRLTPVAVRLGELLGKDVKKADEAFGPAVQEMVAAMNEGDILVLENVRFY CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECEEEE AGEEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYLPAVAGFLMEKELEVLGK CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH ALSNPDRPFTAIIGGAKVKDKIGVIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCED HHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCCCCCC DKIELAKEFMALAKEKGVNFYMPVDVVITEEFSETATTKIVDIDSIPSNWEGVDIGPKTR CHHHHHHHHHHHHHHCCCEEEEEEEEEEECCHHCCHHEEEEEECCCCCCCCCCCCCCCHH EIYADVIKNSKLVVWNGPMGVFEMTPFSNGTRAVGQALADAEGTYSVIGGGDSAAAVEKF HHHHHHHCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHH GMADKMSHISTGGGASLEFMEGKELPGVVCLNDK CCHHHHHHCCCCCCCEEEEECCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA