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The map label for this gene is yfkQ [H]

Identifier: 152977334

GI number: 152977334

Start: 3716071

End: 3717603

Strand: Reverse

Name: yfkQ [H]

Synonym: Bcer98_3659

Alternate gene names: 152977334

Gene position: 3717603-3716071 (Counterclockwise)

Preceding gene: 152977335

Following gene: 152977333

Centisome position: 90.96

GC content: 41.16

Gene sequence:

>1533_bases
ATGTTTTTTCAAAAGAATCAAAAAAAGATTGATCAGCAACAACAAGTTTTACTTTCTTCGGATCTAGATGAAAATTTAGA
GATTCTTCGCTCTATGTATCAGGATTGTTTTGATGTGGTTTTTCATATGTTTTTGATTCGTGGACAAATGAGAGCAGTTC
TTATTTATGTAGAAGGATTATCTAATGTAGAGGAGATTCATACTCATGTGCTTTCTCCACTTATGTCGGAAGTGGAGGGG
GGCGGGCTTAATCCACTGGAAGTGTTAGAAAAACAGATACATCTTTCCAAGACGAAAGAAGTCAGGACATTTACAGATTG
TATAGAGAATATCTCCAGCGGAAACCCTGTACTTCTCGTGCACCAGGAAATGTCAGGGCTCGCGTTAGGGCTTGCGAAAT
GGGAAAAGCGTTCAATTGAAGAACCGGTAGCTGAGAATGTCGTACGAGGACCGCGTGAAGGTTTTGTGGAAACATTGTCA
GTTAACACCTCCTTACTTCGCAGAAGAATCAAAAGTCCTAATTTCAAGATGAAATTAATACAAACCGGTCGCTATACGGA
TACTTCGGTTGTAATTGCTTATATAGAAGGACTTGCGAATGAAACACTAATTGAGGAAGTTGAAAACCGATTGCGGCGCA
TTGACATAGATAGCATATTAGAAAGTGGTTATATCGAGGAATTGATTGAAGATAATCCTTATTCCCCCTTTCCGCAACTT
ATTAATACAGAACGGCCGGATGTAGCTGCTGCGAATCTCTTAGAGGGACGTGTAGTAATTCTGATGGATGGTACACCTTT
TGTCTTAATTGCTCCGATTAGTTTCTTTTCTTTACTTCAATCGCCTGAAGATTATTACCAACGTTTCTTAATTAGTTCAG
CTATTCGTCTGTTGCGGTTTGTATTTATGATATTTTCTCTTGTTTTACCTTCTATCTATGTAGCTGTGCTCACGTATCAT
CAGGAAATGGTGCCGACATCTTTGCTGATTAGTATGGCATCTTCGCGGGAAACAGTTCCTTTTCCAGCTCTTATAGAAGC
ATTAATGATGGAGATTACGTTTGAAGCACTGCGCGAAGCGGGGGTTCGACTTCCGAAACAGGTAGGAGCAGCTGTTAGTA
TTGTTGGAGCTCTAGTTATTGGGCAAGCTGCTGTTCAAGCGGGTCTCGTTTCCACTCCGATGATTATCGTTGTTGCGATT
ACAGGCATTTCTTCTTTTATGGTACCGCATTATACACAAGGGATTGCGTTGCGGATGTTACGCTTTCCAATTATGTTTCT
TGCCGGCTCCCTAGGATTACTTGGGGTTATGCTTGGGGTGATTGCAATTGTCATTCACTTATGTGCATTGCGCTCTTTTG
ATATTCCATACCTTACACCAATCGCTCCGATGAATGCACATGAGCTGAAAGATACTTTGATTCGAGTTCCGTGGTGGAAG
ATGAATACACGTCCCCATTTAACTAATGAATTCAATCGATACCGACAGCCCCCTAGCCAAAAACCAAATCCAAGCGAGGG
AGACGATTTATAG

Upstream 100 bases:

>100_bases
AAATTGAAGAATTTTTTAATTATATTGGATAGATTTTCTAGATATATCGCAAGATAAGGGTAGTTTTCATACAACATGGA
ATAAAAGAAAGGAGCTGTTC

Downstream 100 bases:

>100_bases
AGGAAAGATATGAGGAGAAGGGTGTGAACAAGCATGAATCTCTTATCTCGGAACATCATAAACGTGTTTCTCATTCTTCT
CTTTTTGTTAGCTAGTTTCT

Product: GerA spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MFFQKNQKKIDQQQQVLLSSDLDENLEILRSMYQDCFDVVFHMFLIRGQMRAVLIYVEGLSNVEEIHTHVLSPLMSEVEG
GGLNPLEVLEKQIHLSKTKEVRTFTDCIENISSGNPVLLVHQEMSGLALGLAKWEKRSIEEPVAENVVRGPREGFVETLS
VNTSLLRRRIKSPNFKMKLIQTGRYTDTSVVIAYIEGLANETLIEEVENRLRRIDIDSILESGYIEELIEDNPYSPFPQL
INTERPDVAAANLLEGRVVILMDGTPFVLIAPISFFSLLQSPEDYYQRFLISSAIRLLRFVFMIFSLVLPSIYVAVLTYH
QEMVPTSLLISMASSRETVPFPALIEALMMEITFEALREAGVRLPKQVGAAVSIVGALVIGQAAVQAGLVSTPMIIVVAI
TGISSFMVPHYTQGIALRMLRFPIMFLAGSLGLLGVMLGVIAIVIHLCALRSFDIPYLTPIAPMNAHELKDTLIRVPWWK
MNTRPHLTNEFNRYRQPPSQKPNPSEGDDL

Sequences:

>Translated_510_residues
MFFQKNQKKIDQQQQVLLSSDLDENLEILRSMYQDCFDVVFHMFLIRGQMRAVLIYVEGLSNVEEIHTHVLSPLMSEVEG
GGLNPLEVLEKQIHLSKTKEVRTFTDCIENISSGNPVLLVHQEMSGLALGLAKWEKRSIEEPVAENVVRGPREGFVETLS
VNTSLLRRRIKSPNFKMKLIQTGRYTDTSVVIAYIEGLANETLIEEVENRLRRIDIDSILESGYIEELIEDNPYSPFPQL
INTERPDVAAANLLEGRVVILMDGTPFVLIAPISFFSLLQSPEDYYQRFLISSAIRLLRFVFMIFSLVLPSIYVAVLTYH
QEMVPTSLLISMASSRETVPFPALIEALMMEITFEALREAGVRLPKQVGAAVSIVGALVIGQAAVQAGLVSTPMIIVVAI
TGISSFMVPHYTQGIALRMLRFPIMFLAGSLGLLGVMLGVIAIVIHLCALRSFDIPYLTPIAPMNAHELKDTLIRVPWWK
MNTRPHLTNEFNRYRQPPSQKPNPSEGDDL
>Mature_510_residues
MFFQKNQKKIDQQQQVLLSSDLDENLEILRSMYQDCFDVVFHMFLIRGQMRAVLIYVEGLSNVEEIHTHVLSPLMSEVEG
GGLNPLEVLEKQIHLSKTKEVRTFTDCIENISSGNPVLLVHQEMSGLALGLAKWEKRSIEEPVAENVVRGPREGFVETLS
VNTSLLRRRIKSPNFKMKLIQTGRYTDTSVVIAYIEGLANETLIEEVENRLRRIDIDSILESGYIEELIEDNPYSPFPQL
INTERPDVAAANLLEGRVVILMDGTPFVLIAPISFFSLLQSPEDYYQRFLISSAIRLLRFVFMIFSLVLPSIYVAVLTYH
QEMVPTSLLISMASSRETVPFPALIEALMMEITFEALREAGVRLPKQVGAAVSIVGALVIGQAAVQAGLVSTPMIIVVAI
TGISSFMVPHYTQGIALRMLRFPIMFLAGSLGLLGVMLGVIAIVIHLCALRSFDIPYLTPIAPMNAHELKDTLIRVPWWK
MNTRPHLTNEFNRYRQPPSQKPNPSEGDDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 57295; Mature: 57295

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFQKNQKKIDQQQQVLLSSDLDENLEILRSMYQDCFDVVFHMFLIRGQMRAVLIYVEGL
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEECCC
SNVEEIHTHVLSPLMSEVEGGGLNPLEVLEKQIHLSKTKEVRTFTDCIENISSGNPVLLV
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
HQEMSGLALGLAKWEKRSIEEPVAENVVRGPREGFVETLSVNTSLLRRRIKSPNFKMKLI
ECCCCCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCEEEEE
QTGRYTDTSVVIAYIEGLANETLIEEVENRLRRIDIDSILESGYIEELIEDNPYSPFPQL
ECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHH
INTERPDVAAANLLEGRVVILMDGTPFVLIAPISFFSLLQSPEDYYQRFLISSAIRLLRF
HCCCCCCHHHHHHHCCEEEEEECCCCEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VFMIFSLVLPSIYVAVLTYHQEMVPTSLLISMASSRETVPFPALIEALMMEITFEALREA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
GVRLPKQVGAAVSIVGALVIGQAAVQAGLVSTPMIIVVAITGISSFMVPHYTQGIALRML
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFPIMFLAGSLGLLGVMLGVIAIVIHLCALRSFDIPYLTPIAPMNAHELKDTLIRVPWWK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEE
MNTRPHLTNEFNRYRQPPSQKPNPSEGDDL
CCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFFQKNQKKIDQQQQVLLSSDLDENLEILRSMYQDCFDVVFHMFLIRGQMRAVLIYVEGL
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEECCC
SNVEEIHTHVLSPLMSEVEGGGLNPLEVLEKQIHLSKTKEVRTFTDCIENISSGNPVLLV
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
HQEMSGLALGLAKWEKRSIEEPVAENVVRGPREGFVETLSVNTSLLRRRIKSPNFKMKLI
ECCCCCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCEEEEE
QTGRYTDTSVVIAYIEGLANETLIEEVENRLRRIDIDSILESGYIEELIEDNPYSPFPQL
ECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHH
INTERPDVAAANLLEGRVVILMDGTPFVLIAPISFFSLLQSPEDYYQRFLISSAIRLLRF
HCCCCCCHHHHHHHCCEEEEEECCCCEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VFMIFSLVLPSIYVAVLTYHQEMVPTSLLISMASSRETVPFPALIEALMMEITFEALREA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
GVRLPKQVGAAVSIVGALVIGQAAVQAGLVSTPMIIVVAITGISSFMVPHYTQGIALRML
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFPIMFLAGSLGLLGVMLGVIAIVIHLCALRSFDIPYLTPIAPMNAHELKDTLIRVPWWK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEE
MNTRPHLTNEFNRYRQPPSQKPNPSEGDDL
CCCCCCHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]