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The map label for this gene is fadM [H]

Identifier: 152977278

GI number: 152977278

Start: 3658113

End: 3659030

Strand: Reverse

Name: fadM [H]

Synonym: Bcer98_3600

Alternate gene names: 152977278

Gene position: 3659030-3658113 (Counterclockwise)

Preceding gene: 152977279

Following gene: 152977275

Centisome position: 89.53

GC content: 35.73

Gene sequence:

>918_bases
ATGGAACAATTAATGCGAAATTCGTTTCTTTTCTTATCAAAAAATAAAGCGCTAACAAAACTTGCTAAAAAGTATGGCTT
ACGCTTTGGAGCAGGTCGCTTTGTCGCGGGAGAGACAATCGATTTAGCAGCAGCTACTATTAAAAAGTTAAACAAACAAG
GGCTTTGCGTAACAATCGACTATTTAGGTGAATTCGTTGATAATGAGGCAGAAGCGAATGAAATGGCAAATCAATCCATT
GAAGCAATTCGCGCAATTGGGCGTGAAAAGCTTGATTCCCAGCTTTCTTTAAAAATGACTTCCATGGGATTAGATATCTC
GGATGATCTCGTAATGAACAATATGCGTCGGATTTTAGAGGCAGCAAAAGAAAATGGTGTATTTGTTACGATTGATATGG
AAGACTATTCGCGTTGCGGGAAAACAATTGAAATCTTTAAGCGATTAAAATCTGAGTATGATAATATCGGTACTGTAATT
CAAGCATATTTATATCGTACAGAAAAAGACATTGAAGACTTAAATGCATATAGTCCGAACTTACGTCTTGTAAAAGGGGC
TTATAAGGAATCACCAGAAGTTGCATTCCCAGAAAAGAAAGATGTAGACGAAAACTATAAAAAAATTATTAAAATGCACT
TATTAAATGGAAATTATACTGCAATTGCTTCGCATGATGACGCAATTATTGAATATACAAAGAACCTTGTGAAAGAACAT
AATATTTCACGTGATCAATTTGAATTTCAAATGCTATATGGAATTCGAACAGAACGTCAACTGGAGCTTGTGAAAGAAGG
ATACAAAATGCGCGTTTATGTACCGTATGGAAATGACTGGTATGGTTACTTTATGCGCCGTCTCGCAGAGCGCCCAGCAA
ATGTTGCGTTCGTTTTAAAAGGAATTATGAAAAAATAA

Upstream 100 bases:

>100_bases
AATTATCTAAATAATTATTTGTATCAAATAATTTCAAACAATGATATAATTTAGAAGAGGGGTAAAAAACAGACAAAGTA
CAGTCATAGGGGTGAATTAC

Downstream 100 bases:

>100_bases
CCCAGGGAGAAAAAATCTCCTGGGTTATTTTAATTGTTTCAGTGCATAATGCGCCATCTTTTTTGTGTCGGGATATAGTT
CATGACGAGTAGAAGAAAGA

Product: proline dehydrogenase

Products: NA

Alternate protein names: PRODH 1; Proline oxidase 1 [H]

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MEQLMRNSFLFLSKNKALTKLAKKYGLRFGAGRFVAGETIDLAAATIKKLNKQGLCVTIDYLGEFVDNEAEANEMANQSI
EAIRAIGREKLDSQLSLKMTSMGLDISDDLVMNNMRRILEAAKENGVFVTIDMEDYSRCGKTIEIFKRLKSEYDNIGTVI
QAYLYRTEKDIEDLNAYSPNLRLVKGAYKESPEVAFPEKKDVDENYKKIIKMHLLNGNYTAIASHDDAIIEYTKNLVKEH
NISRDQFEFQMLYGIRTERQLELVKEGYKMRVYVPYGNDWYGYFMRRLAERPANVAFVLKGIMKK

Sequences:

>Translated_305_residues
MEQLMRNSFLFLSKNKALTKLAKKYGLRFGAGRFVAGETIDLAAATIKKLNKQGLCVTIDYLGEFVDNEAEANEMANQSI
EAIRAIGREKLDSQLSLKMTSMGLDISDDLVMNNMRRILEAAKENGVFVTIDMEDYSRCGKTIEIFKRLKSEYDNIGTVI
QAYLYRTEKDIEDLNAYSPNLRLVKGAYKESPEVAFPEKKDVDENYKKIIKMHLLNGNYTAIASHDDAIIEYTKNLVKEH
NISRDQFEFQMLYGIRTERQLELVKEGYKMRVYVPYGNDWYGYFMRRLAERPANVAFVLKGIMKK
>Mature_305_residues
MEQLMRNSFLFLSKNKALTKLAKKYGLRFGAGRFVAGETIDLAAATIKKLNKQGLCVTIDYLGEFVDNEAEANEMANQSI
EAIRAIGREKLDSQLSLKMTSMGLDISDDLVMNNMRRILEAAKENGVFVTIDMEDYSRCGKTIEIFKRLKSEYDNIGTVI
QAYLYRTEKDIEDLNAYSPNLRLVKGAYKESPEVAFPEKKDVDENYKKIIKMHLLNGNYTAIASHDDAIIEYTKNLVKEH
NISRDQFEFQMLYGIRTERQLELVKEGYKMRVYVPYGNDWYGYFMRRLAERPANVAFVLKGIMKK

Specific function: Catalyzes the oxidation of L-proline to delta-1- pyrroline-5-carboxylate (P5C) [H]

COG id: COG0506

COG function: function code E; Proline dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline oxidase family [H]

Homologues:

Organism=Escherichia coli, GI1787250, Length=319, Percent_Identity=28.5266457680251, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015590
- InterPro:   IPR002872
- InterPro:   IPR008219 [H]

Pfam domain/function: PF01619 Pro_dh [H]

EC number: =1.5.99.8 [H]

Molecular weight: Translated: 35139; Mature: 35139

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQLMRNSFLFLSKNKALTKLAKKYGLRFGAGRFVAGETIDLAAATIKKLNKQGLCVTID
CCHHHHCCEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHCCCCCEEEHH
YLGEFVDNEAEANEMANQSIEAIRAIGREKLDSQLSLKMTSMGLDISDDLVMNNMRRILE
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEHHHCCCCCCHHHHHHHHHHHHH
AAKENGVFVTIDMEDYSRCGKTIEIFKRLKSEYDNIGTVIQAYLYRTEKDIEDLNAYSPN
HHHHCCEEEEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LRLVKGAYKESPEVAFPEKKDVDENYKKIIKMHLLNGNYTAIASHDDAIIEYTKNLVKEH
CEEEECHHCCCCCCCCCCCCCCHHHHHHHHHHHEECCCEEEEECCCHHHHHHHHHHHHHC
NISRDQFEFQMLYGIRTERQLELVKEGYKMRVYVPYGNDWYGYFMRRLAERPANVAFVLK
CCCHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHH
GIMKK
HHHCC
>Mature Secondary Structure
MEQLMRNSFLFLSKNKALTKLAKKYGLRFGAGRFVAGETIDLAAATIKKLNKQGLCVTID
CCHHHHCCEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHCCCCCEEEHH
YLGEFVDNEAEANEMANQSIEAIRAIGREKLDSQLSLKMTSMGLDISDDLVMNNMRRILE
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEHHHCCCCCCHHHHHHHHHHHHH
AAKENGVFVTIDMEDYSRCGKTIEIFKRLKSEYDNIGTVIQAYLYRTEKDIEDLNAYSPN
HHHHCCEEEEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LRLVKGAYKESPEVAFPEKKDVDENYKKIIKMHLLNGNYTAIASHDDAIIEYTKNLVKEH
CEEEECHHCCCCCCCCCCCCCCHHHHHHHHHHHEECCCEEEEECCCHHHHHHHHHHHHHC
NISRDQFEFQMLYGIRTERQLELVKEGYKMRVYVPYGNDWYGYFMRRLAERPANVAFVLK
CCCHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHH
GIMKK
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA