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The map label for this gene is ysoA [H]

Identifier: 152976889

GI number: 152976889

Start: 3243293

End: 3244291

Strand: Reverse

Name: ysoA [H]

Synonym: Bcer98_3188

Alternate gene names: 152976889

Gene position: 3244291-3243293 (Counterclockwise)

Preceding gene: 152976890

Following gene: 152976888

Centisome position: 79.38

GC content: 35.84

Gene sequence:

>999_bases
ATGGATAAAAAAGAAAATACGGTCGTATTGTTTCCGCAGTTGTCAGAGCGCTATATTGATCAAGGTTTTTTGGCGCTAAA
AGAAAGGGAATTTGAAGAGGCGTTGCGTTGTTTTGAAATATTACGTCAGTATAATGCAGAAACAGAACAAACAGAATTGG
CCTCGGTAATTTGTTTACTAGAATTAAAACGAATCGAAGAATCTAAAAAACAATGTGAGAAGTTGCTGGAAACAGGAACA
GTTTTGTTTGGGGATATCCTTGAAACATATGTAACGATTTTAGTGCAAACAAATGATTATGAAGGTGTCATTCAAACGGT
TGAAGAAGTGCTGCAGACGAAAGAACTGCTCCCGGAACAAAAAGAGAAATTAGCGCAGCTTGCTTTATTTGCACAAGGTA
TGCTTGGTGGGGAAGAACTGCCTCCGATAGGTTCTAATTTTGAATTGAACGAATTTGCAAATGAACTATTTTCAGATAAC
TTCGGGCAGCAGTTGCGAGCGATTAATGGTCTTTTATTAAAGGATCTTGATAAGGCGCTACCTGCTTTACAGAAGTTTCT
TTTGGATGACAAGCAGCACCCTTATTTGAAAACTTCTATTTTATATAAGATGGTAGAAAATAAAATGGAAAAAGAGGTAG
AAGTAGAGAAATTCGGTGAAACAATTACAGTTATTCCGGCACAGGTAGGTCATGATGAAGAGCAATCTGAAAAGATTATA
CATATATTATCGAATCGATTAGAAAATGATTACCCTGATATATTTAAGACAATTATTACATATTGGAGAGAGATGCAAAC
GAGCATTTTTCCTTTCCCTCTATTAATGAATAACCCAAAAGTTTGGGCAGCTGTTTTAGAGAGAATAGGAAGAAAACGTT
TCGGGTTAATCGTCGATGAAGAGGAACTCATGAAAGTGTATCATATTCATTTAGAGGAATTTCATATTGCCTATCAATGG
TTTTTACGTGTTGAGAAGGAAGGATATTTCCCTGTATAA

Upstream 100 bases:

>100_bases
ATATTTCGAACAAAGAGGTTTCGAATGTTGTGTTCTGATTCTTCATTTGATATATTTACTTTGAAGAGACTAAAAATCTA
AAAAAAAAAGAGGCGAACGT

Downstream 100 bases:

>100_bases
TTATGAAAAAGAATTGTTCAGTTATTGAAACGAGAATATTCTATGTTATAATGTAAGGGTTGCAAAAGGCTGAAGTCTGC
CTGTTTGTAAGAGGAGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MDKKENTVVLFPQLSERYIDQGFLALKEREFEEALRCFEILRQYNAETEQTELASVICLLELKRIEESKKQCEKLLETGT
VLFGDILETYVTILVQTNDYEGVIQTVEEVLQTKELLPEQKEKLAQLALFAQGMLGGEELPPIGSNFELNEFANELFSDN
FGQQLRAINGLLLKDLDKALPALQKFLLDDKQHPYLKTSILYKMVENKMEKEVEVEKFGETITVIPAQVGHDEEQSEKII
HILSNRLENDYPDIFKTIITYWREMQTSIFPFPLLMNNPKVWAAVLERIGRKRFGLIVDEEELMKVYHIHLEEFHIAYQW
FLRVEKEGYFPV

Sequences:

>Translated_332_residues
MDKKENTVVLFPQLSERYIDQGFLALKEREFEEALRCFEILRQYNAETEQTELASVICLLELKRIEESKKQCEKLLETGT
VLFGDILETYVTILVQTNDYEGVIQTVEEVLQTKELLPEQKEKLAQLALFAQGMLGGEELPPIGSNFELNEFANELFSDN
FGQQLRAINGLLLKDLDKALPALQKFLLDDKQHPYLKTSILYKMVENKMEKEVEVEKFGETITVIPAQVGHDEEQSEKII
HILSNRLENDYPDIFKTIITYWREMQTSIFPFPLLMNNPKVWAAVLERIGRKRFGLIVDEEELMKVYHIHLEEFHIAYQW
FLRVEKEGYFPV
>Mature_332_residues
MDKKENTVVLFPQLSERYIDQGFLALKEREFEEALRCFEILRQYNAETEQTELASVICLLELKRIEESKKQCEKLLETGT
VLFGDILETYVTILVQTNDYEGVIQTVEEVLQTKELLPEQKEKLAQLALFAQGMLGGEELPPIGSNFELNEFANELFSDN
FGQQLRAINGLLLKDLDKALPALQKFLLDDKQHPYLKTSILYKMVENKMEKEVEVEKFGETITVIPAQVGHDEEQSEKII
HILSNRLENDYPDIFKTIITYWREMQTSIFPFPLLMNNPKVWAAVLERIGRKRFGLIVDEEELMKVYHIHLEEFHIAYQW
FLRVEKEGYFPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006822
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF04733 Coatomer_E [H]

EC number: NA

Molecular weight: Translated: 38817; Mature: 38817

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKENTVVLFPQLSERYIDQGFLALKEREFEEALRCFEILRQYNAETEQTELASVICLL
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ELKRIEESKKQCEKLLETGTVLFGDILETYVTILVQTNDYEGVIQTVEEVLQTKELLPEQ
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHH
KEKLAQLALFAQGMLGGEELPPIGSNFELNEFANELFSDNFGQQLRAINGLLLKDLDKAL
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
PALQKFLLDDKQHPYLKTSILYKMVENKMEKEVEVEKFGETITVIPAQVGHDEEQSEKII
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHCCCCHHHHHHHH
HILSNRLENDYPDIFKTIITYWREMQTSIFPFPLLMNNPKVWAAVLERIGRKRFGLIVDE
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHCHHHCCCEECH
EELMKVYHIHLEEFHIAYQWFLRVEKEGYFPV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDKKENTVVLFPQLSERYIDQGFLALKEREFEEALRCFEILRQYNAETEQTELASVICLL
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ELKRIEESKKQCEKLLETGTVLFGDILETYVTILVQTNDYEGVIQTVEEVLQTKELLPEQ
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHH
KEKLAQLALFAQGMLGGEELPPIGSNFELNEFANELFSDNFGQQLRAINGLLLKDLDKAL
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
PALQKFLLDDKQHPYLKTSILYKMVENKMEKEVEVEKFGETITVIPAQVGHDEEQSEKII
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHCCCCHHHHHHHH
HILSNRLENDYPDIFKTIITYWREMQTSIFPFPLLMNNPKVWAAVLERIGRKRFGLIVDE
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHCHHHCCCEECH
EELMKVYHIHLEEFHIAYQWFLRVEKEGYFPV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]