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The map label for this gene is mreD [H]

Identifier: 152976866

GI number: 152976866

Start: 3213553

End: 3214095

Strand: Reverse

Name: mreD [H]

Synonym: Bcer98_3165

Alternate gene names: 152976866

Gene position: 3214095-3213553 (Counterclockwise)

Preceding gene: 152976867

Following gene: 152976865

Centisome position: 78.64

GC content: 32.23

Gene sequence:

>543_bases
ATGATGATTTTAAAACGAGCAATTCTTCCTCTTCTGCTTCTTTTTTTCTTTTTATTTGAAAATATGTTTGCTACGGTTGT
GCCAACGGAACTATTTTGGAAAAATTCGATAGCAGTACCGCATTTCTTTATGATTATCCTATGTTTTATTACTGTTTATT
ACGGCCCTCTTCAAGGTGTTTATTATGGGCTGTTATTCGGTTTTTTATTTGATATTGTATATACAGAGCTAGTTGGTGTA
TACATATTTGCTTATCCGATTTTAGCGTATCTTGTTTATAGTACGATGAGGATCTTACAGTTGAATCTATTTATTGTTTC
TTTTATCGTATTGGCAGGAATAGTAGCATTAGAGTATTATGTATATGGATTTTTATCGTTATTAGGACGTATTCATGTGC
CAGCAAATATTTTTTTCACAGATCGTCTCCTTGCTACCGTATTGTTAAATGGAATTTTCTTATTGATAGTTTGTTTCCCA
CTGAGACGATATCTTGTACGTCTATCAAAAGCGATGGAAGAAAGAGAAAAAAGGATTTTCTGA

Upstream 100 bases:

>100_bases
TTATGTAAAGCCTGCTGCGGATTTAAATAATGTGAACCAAGTAATGGTTGCAAAAAGAGTGAAACCTTCAGCAGAATTAG
AACAGTAAGGGGGAGAAGAG

Downstream 100 bases:

>100_bases
GTTTATGTCGAATTGAATCGGTGGGGTGAACTTTAGTGGACGAAAAAAAGCAACAGAACATAACAATAAAAGGGACGAAA
GATGGACTAACACTTCATTT

Product: rod shape-determining protein MreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MMILKRAILPLLLLFFFLFENMFATVVPTELFWKNSIAVPHFFMIILCFITVYYGPLQGVYYGLLFGFLFDIVYTELVGV
YIFAYPILAYLVYSTMRILQLNLFIVSFIVLAGIVALEYYVYGFLSLLGRIHVPANIFFTDRLLATVLLNGIFLLIVCFP
LRRYLVRLSKAMEEREKRIF

Sequences:

>Translated_180_residues
MMILKRAILPLLLLFFFLFENMFATVVPTELFWKNSIAVPHFFMIILCFITVYYGPLQGVYYGLLFGFLFDIVYTELVGV
YIFAYPILAYLVYSTMRILQLNLFIVSFIVLAGIVALEYYVYGFLSLLGRIHVPANIFFTDRLLATVLLNGIFLLIVCFP
LRRYLVRLSKAMEEREKRIF
>Mature_180_residues
MMILKRAILPLLLLFFFLFENMFATVVPTELFWKNSIAVPHFFMIILCFITVYYGPLQGVYYGLLFGFLFDIVYTELVGV
YIFAYPILAYLVYSTMRILQLNLFIVSFIVLAGIVALEYYVYGFLSLLGRIHVPANIFFTDRLLATVLLNGIFLLIVCFP
LRRYLVRLSKAMEEREKRIF

Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]

COG id: COG2891

COG function: function code M; Cell shape-determining protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mreD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007227 [H]

Pfam domain/function: PF04093 MreD [H]

EC number: NA

Molecular weight: Translated: 21067; Mature: 21067

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMILKRAILPLLLLFFFLFENMFATVVPTELFWKNSIAVPHFFMIILCFITVYYGPLQGV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
YYGLLFGFLFDIVYTELVGVYIFAYPILAYLVYSTMRILQLNLFIVSFIVLAGIVALEYY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYGFLSLLGRIHVPANIFFTDRLLATVLLNGIFLLIVCFPLRRYLVRLSKAMEEREKRIF
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMILKRAILPLLLLFFFLFENMFATVVPTELFWKNSIAVPHFFMIILCFITVYYGPLQGV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
YYGLLFGFLFDIVYTELVGVYIFAYPILAYLVYSTMRILQLNLFIVSFIVLAGIVALEYY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYGFLSLLGRIHVPANIFFTDRLLATVLLNGIFLLIVCFPLRRYLVRLSKAMEEREKRIF
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1400225; 1400224; 9384377 [H]