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The map label for this gene is rng [H]

Identifier: 152976861

GI number: 152976861

Start: 3208821

End: 3210212

Strand: Reverse

Name: rng [H]

Synonym: Bcer98_3160

Alternate gene names: 152976861

Gene position: 3210212-3208821 (Counterclockwise)

Preceding gene: 152976862

Following gene: 152976860

Centisome position: 78.55

GC content: 35.7

Gene sequence:

>1392_bases
TTGAAGACGTTATATATTAACTATACAGGTTCGGAAAAGAGAGTGGCAATAGAAGAAAAACAAAAGATTGTTGAACTTTC
GTGGCACCGCAATGGGGACGAAGAAATTGTTGGATACATTTATGTTGGACGTGTTGTCAGAACGATTGCTGGTATGAATG
CGGCATTTGTAAATATCGGTTTAGAAAAACATGCTTATCTTTCTTACGATGATGTTCCAAAGGCGTACCGAGTTCATGAG
GGGCAAGCTATACTTGTACAAGTAGTAAAAGAAGCAATCGACACAAAAGGTCCTAAATTAACAGCGAATATAGAATTTAC
CGGGAAATATGTTGTTTATATGCCTTATGATGAAATGCGTGCCGTTTCCCGGAAAATAAAAAGTCAAAAAAAACGGAAAG
ACTTGTTTGCAATTGAGGTAGAAGGGTTAGGAGGATATATCTTTCGCTCGGCATGTGAGAAAGGAACAACGGCTGATATA
AAAGCTGAAATAGAACACTTTCAACAATTATTTGAAGAACTAAAAAGAAAAGAAAGGTGTGGAAAGGCACCGGTATTAGT
TCATCGCCCAGCTACTTTTTTAGATCGTATATTTCAAGAAAACCCTACTGAATCAATTGAGAAAGTGGTTGTAGATTCAA
GAGAACCGGTAAGGGAGTTAGAAAATAAGCTAGGTAAAGAAAAAGTATTTTTCTATCGTGAAAAGTCATCCATGTTTAGT
CATTATGGTATCGAGAGAGAGATCGAAAAAGCATTACAAAAAATTGTTTGGTTACAAAATGGCTCCTATTTAATTATAGA
ACAGATGGAGACAATGACAGTTATTGATGTAAATACTGGGAAATTTACTGGGAAACAAGATTTACAAGATACAGTTGTAC
GAACAAATGAAATAGCTGTTGAAGAAATTGCTCGTCAGTTACGACTACGTGATATTGGGGGAATGATATTAATTGATTTT
ATCAATATGAAAAAAGAAGAAGATCAGGAGAGAATACGCGAGAAATTAATAATAGCTTTGCAGGATGACCGTACATATAC
GAGGGTTCTTGGATTTACCGAGCTCGGCATTTTAGAAATGACACGTAAGCGCAAGAAACAGTCACTGCGTGATATATTAT
TAGAAGATTGTGCGAAATGCATGGCAACAGGGTATAGTATTTCAAATGAAACAATTGCGTATGAACTAGAAAGAGAACTG
CTCTCGTATAGTCACATGGAAGATGAAGCGGTGCTTATTGCAGCGCCGAAAGCTGTGCAAAAAATATTTTTACAAAAAGA
ATTGCAAAAAAATATTCCATTTCAAATTTATTTTAAAGAGGAAGAAATGGAAAAGTACGCACTTATTAGGTTTGGAACGA
AGCAGGAGATGATAGATAGGAAAAATAGTTAG

Upstream 100 bases:

>100_bases
CGCACAACATCATCTGTGGAAGAGTTAATCGGTTAGTGTTGACGATGACACTAACCTTTTATAATGTAAGAAGAAAAAAT
GAAAAAGTGAGGAAGGTATT

Downstream 100 bases:

>100_bases
TAGAACATTTGTTGACAATAGTCAATGATTCGTGGTAACATCTTTATGTTATAGTTTATAGCACCTAAATGGCTATATAC
TACAACCGCACAATGCAGGT

Product: ribonuclease

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MKTLYINYTGSEKRVAIEEKQKIVELSWHRNGDEEIVGYIYVGRVVRTIAGMNAAFVNIGLEKHAYLSYDDVPKAYRVHE
GQAILVQVVKEAIDTKGPKLTANIEFTGKYVVYMPYDEMRAVSRKIKSQKKRKDLFAIEVEGLGGYIFRSACEKGTTADI
KAEIEHFQQLFEELKRKERCGKAPVLVHRPATFLDRIFQENPTESIEKVVVDSREPVRELENKLGKEKVFFYREKSSMFS
HYGIEREIEKALQKIVWLQNGSYLIIEQMETMTVIDVNTGKFTGKQDLQDTVVRTNEIAVEEIARQLRLRDIGGMILIDF
INMKKEEDQERIREKLIIALQDDRTYTRVLGFTELGILEMTRKRKKQSLRDILLEDCAKCMATGYSISNETIAYELEREL
LSYSHMEDEAVLIAAPKAVQKIFLQKELQKNIPFQIYFKEEEMEKYALIRFGTKQEMIDRKNS

Sequences:

>Translated_463_residues
MKTLYINYTGSEKRVAIEEKQKIVELSWHRNGDEEIVGYIYVGRVVRTIAGMNAAFVNIGLEKHAYLSYDDVPKAYRVHE
GQAILVQVVKEAIDTKGPKLTANIEFTGKYVVYMPYDEMRAVSRKIKSQKKRKDLFAIEVEGLGGYIFRSACEKGTTADI
KAEIEHFQQLFEELKRKERCGKAPVLVHRPATFLDRIFQENPTESIEKVVVDSREPVRELENKLGKEKVFFYREKSSMFS
HYGIEREIEKALQKIVWLQNGSYLIIEQMETMTVIDVNTGKFTGKQDLQDTVVRTNEIAVEEIARQLRLRDIGGMILIDF
INMKKEEDQERIREKLIIALQDDRTYTRVLGFTELGILEMTRKRKKQSLRDILLEDCAKCMATGYSISNETIAYELEREL
LSYSHMEDEAVLIAAPKAVQKIFLQKELQKNIPFQIYFKEEEMEKYALIRFGTKQEMIDRKNS
>Mature_463_residues
MKTLYINYTGSEKRVAIEEKQKIVELSWHRNGDEEIVGYIYVGRVVRTIAGMNAAFVNIGLEKHAYLSYDDVPKAYRVHE
GQAILVQVVKEAIDTKGPKLTANIEFTGKYVVYMPYDEMRAVSRKIKSQKKRKDLFAIEVEGLGGYIFRSACEKGTTADI
KAEIEHFQQLFEELKRKERCGKAPVLVHRPATFLDRIFQENPTESIEKVVVDSREPVRELENKLGKEKVFFYREKSSMFS
HYGIEREIEKALQKIVWLQNGSYLIIEQMETMTVIDVNTGKFTGKQDLQDTVVRTNEIAVEEIARQLRLRDIGGMILIDF
INMKKEEDQERIREKLIIALQDDRTYTRVLGFTELGILEMTRKRKKQSLRDILLEDCAKCMATGYSISNETIAYELEREL
LSYSHMEDEAVLIAAPKAVQKIFLQKELQKNIPFQIYFKEEEMEKYALIRFGTKQEMIDRKNS

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=444, Percent_Identity=35.1351351351351, Blast_Score=240, Evalue=2e-64,
Organism=Escherichia coli, GI1787325, Length=425, Percent_Identity=31.2941176470588, Blast_Score=209, Evalue=4e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 53854; Mature: 53854

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLYINYTGSEKRVAIEEKQKIVELSWHRNGDEEIVGYIYVGRVVRTIAGMNAAFVNIG
CEEEEEEECCCCCEEEHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC
LEKHAYLSYDDVPKAYRVHEGQAILVQVVKEAIDTKGPKLTANIEFTGKYVVYMPYDEMR
CCCCEEECCCCCCCHHEECCCCHHHHHHHHHHHCCCCCEEEEEEEEECEEEEEECHHHHH
AVSRKIKSQKKRKDLFAIEVEGLGGYIFRSACEKGTTADIKAEIEHFQQLFEELKRKERC
HHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC
GKAPVLVHRPATFLDRIFQENPTESIEKVVVDSREPVRELENKLGKEKVFFYREKSSMFS
CCCCEEEECCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECHHHHHH
HYGIEREIEKALQKIVWLQNGSYLIIEQMETMTVIDVNTGKFTGKQDLQDTVVRTNEIAV
HCCCHHHHHHHHHHHHEECCCCEEEEEECCEEEEEECCCCCCCCCHHHHHHHHHCCHHHH
EEIARQLRLRDIGGMILIDFINMKKEEDQERIREKLIIALQDDRTYTRVLGFTELGILEM
HHHHHHHHHHHCCCEEEEEEHHCCCCHHHHHHHHHEEEEEECCCCCHHHHCHHHHHHHHH
TRKRKKQSLRDILLEDCAKCMATGYSISNETIAYELERELLSYSHMEDEAVLIAAPKAVQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHH
KIFLQKELQKNIPFQIYFKEEEMEKYALIRFGTKQEMIDRKNS
HHHHHHHHHHCCCEEEEEEHHHHHHHHHEEECCHHHHHCCCCC
>Mature Secondary Structure
MKTLYINYTGSEKRVAIEEKQKIVELSWHRNGDEEIVGYIYVGRVVRTIAGMNAAFVNIG
CEEEEEEECCCCCEEEHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC
LEKHAYLSYDDVPKAYRVHEGQAILVQVVKEAIDTKGPKLTANIEFTGKYVVYMPYDEMR
CCCCEEECCCCCCCHHEECCCCHHHHHHHHHHHCCCCCEEEEEEEEECEEEEEECHHHHH
AVSRKIKSQKKRKDLFAIEVEGLGGYIFRSACEKGTTADIKAEIEHFQQLFEELKRKERC
HHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC
GKAPVLVHRPATFLDRIFQENPTESIEKVVVDSREPVRELENKLGKEKVFFYREKSSMFS
CCCCEEEECCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECHHHHHH
HYGIEREIEKALQKIVWLQNGSYLIIEQMETMTVIDVNTGKFTGKQDLQDTVVRTNEIAV
HCCCHHHHHHHHHHHHEECCCCEEEEEECCEEEEEECCCCCCCCCHHHHHHHHHCCHHHH
EEIARQLRLRDIGGMILIDFINMKKEEDQERIREKLIIALQDDRTYTRVLGFTELGILEM
HHHHHHHHHHHCCCEEEEEEHHCCCCHHHHHHHHHEEEEEECCCCCHHHHCHHHHHHHHH
TRKRKKQSLRDILLEDCAKCMATGYSISNETIAYELERELLSYSHMEDEAVLIAAPKAVQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHH
KIFLQKELQKNIPFQIYFKEEEMEKYALIRFGTKQEMIDRKNS
HHHHHHHHHHCCCEEEEEEHHHHHHHHHEEECCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]