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The map label for this gene is ruvB [H]

Identifier: 152976838

GI number: 152976838

Start: 3185047

End: 3186048

Strand: Reverse

Name: ruvB [H]

Synonym: Bcer98_3137

Alternate gene names: 152976838

Gene position: 3186048-3185047 (Counterclockwise)

Preceding gene: 152976839

Following gene: 152976837

Centisome position: 77.96

GC content: 41.92

Gene sequence:

>1002_bases
ATGGACGAACGTCTCCTGTCAGGGGAATCTGCATATGAAGATGCAGACTTAGAATATTCGTTGCGGCCACAGACACTCCG
TCAATATATTGGCCAAGATAAGGCAAAACATAATTTAGAGGTATTTATTGAGGCTGCAAAAATGCGTGAGGAAACATTGG
ATCACGTCTTATTATATGGACCACCGGGACTTGGGAAAACAACGCTTGCTAATATTATCGCAAACGAAATGGGAGTTAAT
ATTCGAACGACATCAGGTCCAGCAATTGAAAGGCCAGGAGATTTAGCAGCAGTGTTAACGGCTCTTCAGCCTGGTGATGT
ACTATTTATTGATGAGATTCATCGTTTGCATAGATCAATTGAGGAAGTTTTATATCCAGCAATGGAGGACTTTTGTCTTG
ATATTGTCATTGGTAAAGGGCCGACTGCACGGTCAGTAAGGCTTGACTTGCCACCTTTTACATTAGTAGGTGCAACAACG
CGTGCGGGAGCACTATCAGCGCCGCTTCGTGATCGTTTTGGGGTATTATCAAGACTGGAGTATTATACAGTAGATCAATT
ATCAGCGATTGTAGAAAGAACAGCAGAAGTGTTTGAAGTGGAAATTGATTCTTTAGCTGCTTTAGAAATTGCAAGACGTG
CTCGTGGTACACCGCGTATCGCGAACCGTCTTTTAAGACGCGTACGTGATTTCGCACAAGTAAGAGGCGATGGAACAATC
GCAATGGAAATTACACAAATGGCATTAGAGCTCTTGCAAGTAGATAAATTAGGTCTGGATCACATTGACCATAAATTCCT
ACTTGGTATTATTGAAAAATTCCGCGGTGGTCCAGTTGGATTAGAGACAGTTTCAGCGACAATTGGTGAAGAATCTCATA
CAATTGAAGATGTATATGAGCCATATTTACTGCAAATTGGATTCTTACAGCGTACGCCACGAGGAAGAATTGTTACGCCA
CTTGCATACCAACATTTCGGAATGGAGATGCCAAAAATATGA

Upstream 100 bases:

>100_bases
TCAATCGCGTCTTGCCAGAGTTATTAAAAGAGTCATTGACGACGGATCAGTATATTAAAAAGGCGCTTAGTCTTTTACTA
AATGGTAAGAGGTGAGTAGA

Downstream 100 bases:

>100_bases
CAGATATGTCAAAACTTCTTATAACAGCTGGTATTCTTCTCATTGTGATTGGATTAGCTTGGAAGTTTATCGGAAGGCTT
CCAGGCGATATTTTTGTGAA

Product: Holliday junction DNA helicase RuvB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MDERLLSGESAYEDADLEYSLRPQTLRQYIGQDKAKHNLEVFIEAAKMREETLDHVLLYGPPGLGKTTLANIIANEMGVN
IRTTSGPAIERPGDLAAVLTALQPGDVLFIDEIHRLHRSIEEVLYPAMEDFCLDIVIGKGPTARSVRLDLPPFTLVGATT
RAGALSAPLRDRFGVLSRLEYYTVDQLSAIVERTAEVFEVEIDSLAALEIARRARGTPRIANRLLRRVRDFAQVRGDGTI
AMEITQMALELLQVDKLGLDHIDHKFLLGIIEKFRGGPVGLETVSATIGEESHTIEDVYEPYLLQIGFLQRTPRGRIVTP
LAYQHFGMEMPKI

Sequences:

>Translated_333_residues
MDERLLSGESAYEDADLEYSLRPQTLRQYIGQDKAKHNLEVFIEAAKMREETLDHVLLYGPPGLGKTTLANIIANEMGVN
IRTTSGPAIERPGDLAAVLTALQPGDVLFIDEIHRLHRSIEEVLYPAMEDFCLDIVIGKGPTARSVRLDLPPFTLVGATT
RAGALSAPLRDRFGVLSRLEYYTVDQLSAIVERTAEVFEVEIDSLAALEIARRARGTPRIANRLLRRVRDFAQVRGDGTI
AMEITQMALELLQVDKLGLDHIDHKFLLGIIEKFRGGPVGLETVSATIGEESHTIEDVYEPYLLQIGFLQRTPRGRIVTP
LAYQHFGMEMPKI
>Mature_333_residues
MDERLLSGESAYEDADLEYSLRPQTLRQYIGQDKAKHNLEVFIEAAKMREETLDHVLLYGPPGLGKTTLANIIANEMGVN
IRTTSGPAIERPGDLAAVLTALQPGDVLFIDEIHRLHRSIEEVLYPAMEDFCLDIVIGKGPTARSVRLDLPPFTLVGATT
RAGALSAPLRDRFGVLSRLEYYTVDQLSAIVERTAEVFEVEIDSLAALEIARRARGTPRIANRLLRRVRDFAQVRGDGTI
AMEITQMALELLQVDKLGLDHIDHKFLLGIIEKFRGGPVGLETVSATIGEESHTIEDVYEPYLLQIGFLQRTPRGRIVTP
LAYQHFGMEMPKI

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG2255

COG function: function code L; Holliday junction resolvasome, helicase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvB family [H]

Homologues:

Organism=Escherichia coli, GI1788167, Length=331, Percent_Identity=61.0271903323263, Blast_Score=427, Evalue=1e-121,
Organism=Escherichia coli, GI1787119, Length=248, Percent_Identity=27.4193548387097, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004605
- InterPro:   IPR008823
- InterPro:   IPR008824
- InterPro:   IPR011991
- ProDom:   PD005323 [H]

Pfam domain/function: PF05491 RuvB_C; PF05496 RuvB_N [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 37099; Mature: 37099

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDERLLSGESAYEDADLEYSLRPQTLRQYIGQDKAKHNLEVFIEAAKMREETLDHVLLYG
CCCCCCCCCCCCCCCCCCEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCEEEEEC
PPGLGKTTLANIIANEMGVNIRTTSGPAIERPGDLAAVLTALQPGDVLFIDEIHRLHRSI
CCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHH
EEVLYPAMEDFCLDIVIGKGPTARSVRLDLPPFTLVGATTRAGALSAPLRDRFGVLSRLE
HHHHHHHHHHHEEEEEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH
YYTVDQLSAIVERTAEVFEVEIDSLAALEIARRARGTPRIANRLLRRVRDFAQVRGDGTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEE
AMEITQMALELLQVDKLGLDHIDHKFLLGIIEKFRGGPVGLETVSATIGEESHTIEDVYE
EHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHH
PYLLQIGFLQRTPRGRIVTPLAYQHFGMEMPKI
HHHHHHHHHHCCCCCCEECHHHHHHHCCCCCCC
>Mature Secondary Structure
MDERLLSGESAYEDADLEYSLRPQTLRQYIGQDKAKHNLEVFIEAAKMREETLDHVLLYG
CCCCCCCCCCCCCCCCCCEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCEEEEEC
PPGLGKTTLANIIANEMGVNIRTTSGPAIERPGDLAAVLTALQPGDVLFIDEIHRLHRSI
CCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHH
EEVLYPAMEDFCLDIVIGKGPTARSVRLDLPPFTLVGATTRAGALSAPLRDRFGVLSRLE
HHHHHHHHHHHEEEEEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH
YYTVDQLSAIVERTAEVFEVEIDSLAALEIARRARGTPRIANRLLRRVRDFAQVRGDGTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEE
AMEITQMALELLQVDKLGLDHIDHKFLLGIIEKFRGGPVGLETVSATIGEESHTIEDVYE
EHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHH
PYLLQIGFLQRTPRGRIVTPLAYQHFGMEMPKI
HHHHHHHHHHCCCCCCEECHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA