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The map label for this gene is yhcS [H]

Identifier: 152976815

GI number: 152976815

Start: 3156250

End: 3157056

Strand: Reverse

Name: yhcS [H]

Synonym: Bcer98_3113

Alternate gene names: 152976815

Gene position: 3157056-3156250 (Counterclockwise)

Preceding gene: 152976816

Following gene: 152976814

Centisome position: 77.25

GC content: 34.08

Gene sequence:

>807_bases
ATGAAGCGAAATATTGTTTTTGGAGTTTTTGTATTAGGCCTTAGCATTTTCCTATATCCTACTATCAGTAATTGGTTGGC
GACGAGGGCACATTATTCTGAGATTAACTCTTATGATAAGAAAATAAAATCATTGCAAAAGAAAGAAATTGAACGTAGGA
AAATGGAAGCAGCTGAGTATAACAAACAAGTTCAAAACTCTACGCAAACATTCTCAGATCCGTTTGCTGAAGAACAAAAA
AGTAATCAAAAATCGTACGTAGATGCTTTAAATTTGGGCGATGTAATGGGATATATTGAAATACCTAAAATCGATGAAAA
ATTGCCAATCTATCAAGGAACTTCTGAGGAAGTATTAAGCCGTGGGGTAGGTCATTTAGATAGATCTTCGCTCCCAGTAG
GTGGGAAAAGTACGCACACTGTTTTAACGGGGCATCGTGGTTTACCGTCTGCAAAGTTATTTACAGATTTAGATAAGTTA
GTTGAAGGAGATCTTTTCTATATTCATTCCTTAAATAATATTCTTGCTTATGAAGTAGATCAAATAAAAGTAGTGTTACC
ACATGAAACGGATGATTTACTAATTGCAGAAAATCAAGATTATACAACGTTAGTTACATGTACGCCGTATGGATCAAATA
CACATAGATTGCTTATTCGAGGTGAGCGTGTAGAGTATAGTCAAAAAGAAAAAGAGCGACAAGAAATGAGTAATGGGAAA
TGGTTCGATAAGTGGATAATCATTGTTCCAATCATACTGTTATGTACATTTCTATTCGCAATTTATAAGAGAAGAATAAG
TAGATAA

Upstream 100 bases:

>100_bases
TAATTAAGTTTTTAGAGAGGTTTGACCACGTAATGTAAAAAGAGGAGAAGCGATTTGCTTTCCTCTTTTCGACATTTCAG
TACGTATAGAGGGGAGAACT

Downstream 100 bases:

>100_bases
AACATAATCTTGTCTATATGCTCAATTTACAAAATTTTAAAAAAGAATAACGTGAAGGTGGAGACAGGGAAATTGAGACC
ACAATTGAAGAAGATAAGTA

Product: sortase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKRNIVFGVFVLGLSIFLYPTISNWLATRAHYSEINSYDKKIKSLQKKEIERRKMEAAEYNKQVQNSTQTFSDPFAEEQK
SNQKSYVDALNLGDVMGYIEIPKIDEKLPIYQGTSEEVLSRGVGHLDRSSLPVGGKSTHTVLTGHRGLPSAKLFTDLDKL
VEGDLFYIHSLNNILAYEVDQIKVVLPHETDDLLIAENQDYTTLVTCTPYGSNTHRLLIRGERVEYSQKEKERQEMSNGK
WFDKWIIIVPIILLCTFLFAIYKRRISR

Sequences:

>Translated_268_residues
MKRNIVFGVFVLGLSIFLYPTISNWLATRAHYSEINSYDKKIKSLQKKEIERRKMEAAEYNKQVQNSTQTFSDPFAEEQK
SNQKSYVDALNLGDVMGYIEIPKIDEKLPIYQGTSEEVLSRGVGHLDRSSLPVGGKSTHTVLTGHRGLPSAKLFTDLDKL
VEGDLFYIHSLNNILAYEVDQIKVVLPHETDDLLIAENQDYTTLVTCTPYGSNTHRLLIRGERVEYSQKEKERQEMSNGK
WFDKWIIIVPIILLCTFLFAIYKRRISR
>Mature_268_residues
MKRNIVFGVFVLGLSIFLYPTISNWLATRAHYSEINSYDKKIKSLQKKEIERRKMEAAEYNKQVQNSTQTFSDPFAEEQK
SNQKSYVDALNLGDVMGYIEIPKIDEKLPIYQGTSEEVLSRGVGHLDRSSLPVGGKSTHTVLTGHRGLPSAKLFTDLDKL
VEGDLFYIHSLNNILAYEVDQIKVVLPHETDDLLIAENQDYTTLVTCTPYGSNTHRLLIRGERVEYSQKEKERQEMSNGK
WFDKWIIIVPIILLCTFLFAIYKRRISR

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005754 [H]

Pfam domain/function: PF04203 Sortase [H]

EC number: NA

Molecular weight: Translated: 30855; Mature: 30855

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRNIVFGVFVLGLSIFLYPTISNWLATRAHYSEINSYDKKIKSLQKKEIERRKMEAAEY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKQVQNSTQTFSDPFAEEQKSNQKSYVDALNLGDVMGYIEIPKIDEKLPIYQGTSEEVLS
HHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCHHHHHH
RGVGHLDRSSLPVGGKSTHTVLTGHRGLPSAKLFTDLDKLVEGDLFYIHSLNNILAYEVD
HCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCHHEEEEC
QIKVVLPHETDDLLIAENQDYTTLVTCTPYGSNTHRLLIRGERVEYSQKEKERQEMSNGK
EEEEEECCCCCCEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHCCC
WFDKWIIIVPIILLCTFLFAIYKRRISR
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRNIVFGVFVLGLSIFLYPTISNWLATRAHYSEINSYDKKIKSLQKKEIERRKMEAAEY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKQVQNSTQTFSDPFAEEQKSNQKSYVDALNLGDVMGYIEIPKIDEKLPIYQGTSEEVLS
HHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCHHHHHH
RGVGHLDRSSLPVGGKSTHTVLTGHRGLPSAKLFTDLDKLVEGDLFYIHSLNNILAYEVD
HCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCHHEEEEC
QIKVVLPHETDDLLIAENQDYTTLVTCTPYGSNTHRLLIRGERVEYSQKEKERQEMSNGK
EEEEEECCCCCCEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHCCC
WFDKWIIIVPIILLCTFLFAIYKRRISR
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]