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The map label for this gene is catD [H]

Identifier: 152976781

GI number: 152976781

Start: 3123042

End: 3123446

Strand: Reverse

Name: catD [H]

Synonym: Bcer98_3079

Alternate gene names: 152976781

Gene position: 3123446-3123042 (Counterclockwise)

Preceding gene: 152976783

Following gene: 152976780

Centisome position: 76.42

GC content: 33.33

Gene sequence:

>405_bases
ATGAATCAACGTATTGGTAACTTAATTATTCGTATCGTGTTAGGAGTAACGTTCTTCATGCACGGTTTAGTAAAATTCCA
ATCAGGAATTGAAAATATTGCAGGATGGTTTACAAGTATCGGTTTACCGGGTGGACTTGCTTATGGCGTAGCAACAATGG
AATTAATTGGCGGCTTATTATTAATTATCGGTTTAGGTGTAAGATATGTTGGACTATTATTTGCAATCATTATGGTTGGA
GCAATTGTAAAAGTAAAATGGTCAGCTGGTTTATTAGGAGATGGGAAAAATCCTGGTTTTGAATTAGATCTTGCATTATT
AGCAATGGGACTTCACCTATTTATTGCAAAAGCTGATGGTTTTATAGATAATTTCTTAAAAGCAACTATGTTTAAAAAAG
ACTAA

Upstream 100 bases:

>100_bases
TTTTTTCTTAAAAAATGAATTGACGAATAAAAAAATTTATTATATGTTTTGTAATGTTAATAAAAGTTTTATATAACAAA
ACTATAAAGGAGAGAAAGAA

Downstream 100 bases:

>100_bases
TCTTTGCGGGGGTATAACAATATGAGCTTTCAGCTTCATCCCAACACAGCACTTGGTATTGTTCATCTATACGTATCAAA
TATAAAAAGATCACTAGAGT

Product: DoxX family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MNQRIGNLIIRIVLGVTFFMHGLVKFQSGIENIAGWFTSIGLPGGLAYGVATMELIGGLLLIIGLGVRYVGLLFAIIMVG
AIVKVKWSAGLLGDGKNPGFELDLALLAMGLHLFIAKADGFIDNFLKATMFKKD

Sequences:

>Translated_134_residues
MNQRIGNLIIRIVLGVTFFMHGLVKFQSGIENIAGWFTSIGLPGGLAYGVATMELIGGLLLIIGLGVRYVGLLFAIIMVG
AIVKVKWSAGLLGDGKNPGFELDLALLAMGLHLFIAKADGFIDNFLKATMFKKD
>Mature_134_residues
MNQRIGNLIIRIVLGVTFFMHGLVKFQSGIENIAGWFTSIGLPGGLAYGVATMELIGGLLLIIGLGVRYVGLLFAIIMVG
AIVKVKWSAGLLGDGKNPGFELDLALLAMGLHLFIAKADGFIDNFLKATMFKKD

Specific function: Essential for growth and viability in the presence of catechol and probably involved in the detoxification of catechol [H]

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 14340; Mature: 14340

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQRIGNLIIRIVLGVTFFMHGLVKFQSGIENIAGWFTSIGLPGGLAYGVATMELIGGLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LIIGLGVRYVGLLFAIIMVGAIVKVKWSAGLLGDGKNPGFELDLALLAMGLHLFIAKADG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FIDNFLKATMFKKD
HHHHHHHHHHHCCC
>Mature Secondary Structure
MNQRIGNLIIRIVLGVTFFMHGLVKFQSGIENIAGWFTSIGLPGGLAYGVATMELIGGLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LIIGLGVRYVGLLFAIIMVGAIVKVKWSAGLLGDGKNPGFELDLALLAMGLHLFIAKADG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FIDNFLKATMFKKD
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8704981; 9384377 [H]