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The map label for this gene is yfiM [H]

Identifier: 152974060

GI number: 152974060

Start: 227416

End: 228612

Strand: Direct

Name: yfiM [H]

Synonym: Bcer98_0216

Alternate gene names: 152974060

Gene position: 227416-228612 (Clockwise)

Preceding gene: 152974059

Following gene: 152974061

Centisome position: 5.56

GC content: 37.09

Gene sequence:

>1197_bases
ATGAAAAGCCTCATTGTAGCATGGAAAGATGTAAAGATTCGTATCATCGATCGGCGCGGAGTTATGATGATGTTACTAAT
GCCATTATTGCTCACGGCTATTTTAGGATCGGCACTAAGTAACATATTTGATAACGGAGGACTACCTAAAACAGTAATCG
GCTATTATCAAGAAGGCCCGGATGAGTTTGGTGAGATGCTTCGAAAAGACATATTGCAATCAAAAGAGATAGAGAAGGAT
ATAAAAGTAGAAATGGTAACATCACAAAGTGAGCTAGAGGACTTATTAAAAAAACAAAAAATTGATGTTGGGGTAATCAT
ACCAAGCGGCTGGAGTGAACAGATAGAAGAAGGAACTTTAAAAGAAGCAAAACTAATGACGAATCCAGCAAAAGGTATAC
AAGCAAAAATTGCTGAATCGGTTATTCGTTCTTTTACAGAACAGGCACAAACCATCGCAGTTTCTACTCAGGTTGTTATT
ACAGAGTTAGCAAAGTCGCAACCTAAAAATATAGAACAAATCGCAAAAGAAGTGAGTACGAATTTACAAACAGTAGCTAC
TTCCGATAGAGATGAAGTCGAAAAAGGAACCATCGGTAAAAAGACAGTCACTGCCATGCAATATTATGCAGCAGCTATGG
TAGTCATGTTTTTATTATTTAATATAACAGTTGGTGCGAAATCTATTATAACGGAGCGAAGAACAGAAACGTTGGCAAGG
TTATTCAGTACTCCAACAAGTTCATTCTCTATTTTATTAGGAAAATTCTTTGGAACATTGTTATTTTCTCTTATTCAATT
TGGAGTATTTGTATTGGCTACTCATTATGTATTTCATGTGAATTGGGGCGAGAATATATTTCAGATGATAACAGTAGGAA
CTTCCTATGCCATTTGTGTTTCTGGATTATCGATGCTTATTGCAGCATGGATTCATGAAGAGAAGACGGCAGATTTAATG
GGGGGGATTGGAGTTCAATTACTTGCTCTATTAGGCGGATCTATGCTGCCGCTTTATGCGTTTCCAGATAGTCTTCAAAC
CATTGCTCATATTGCTCCAAATAAATGGGCGCTGACAAGTTTTTTAAACATTATGTCGGGTACATCTTGGAGTACATTAC
TTCCAGTTATCTTAAGTTTGGCTAGTGCAGGATTTGTTTCAGTAATTATTGGAACTGTTCGTCTACGCATGAGATAG

Upstream 100 bases:

>100_bases
TCGAGCGCAAATTTTAAAACTTGAAGTGCAAGAACCAAATTTAGAAGCCCTTTTTTTACAATTAACAGGGCGGTCACTTC
GCGATTAGGGGGAGAATGTT

Downstream 100 bases:

>100_bases
GAGGAGAAGAAATGAAAAAAATTTGGGCGCTTTGTTCGTTAGAGTTAAAACAAGTTTTCACGAAACCGCAAAGCTATATA
CTCATGTTTGGAATGCCAAT

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MKSLIVAWKDVKIRIIDRRGVMMMLLMPLLLTAILGSALSNIFDNGGLPKTVIGYYQEGPDEFGEMLRKDILQSKEIEKD
IKVEMVTSQSELEDLLKKQKIDVGVIIPSGWSEQIEEGTLKEAKLMTNPAKGIQAKIAESVIRSFTEQAQTIAVSTQVVI
TELAKSQPKNIEQIAKEVSTNLQTVATSDRDEVEKGTIGKKTVTAMQYYAAAMVVMFLLFNITVGAKSIITERRTETLAR
LFSTPTSSFSILLGKFFGTLLFSLIQFGVFVLATHYVFHVNWGENIFQMITVGTSYAICVSGLSMLIAAWIHEEKTADLM
GGIGVQLLALLGGSMLPLYAFPDSLQTIAHIAPNKWALTSFLNIMSGTSWSTLLPVILSLASAGFVSVIIGTVRLRMR

Sequences:

>Translated_398_residues
MKSLIVAWKDVKIRIIDRRGVMMMLLMPLLLTAILGSALSNIFDNGGLPKTVIGYYQEGPDEFGEMLRKDILQSKEIEKD
IKVEMVTSQSELEDLLKKQKIDVGVIIPSGWSEQIEEGTLKEAKLMTNPAKGIQAKIAESVIRSFTEQAQTIAVSTQVVI
TELAKSQPKNIEQIAKEVSTNLQTVATSDRDEVEKGTIGKKTVTAMQYYAAAMVVMFLLFNITVGAKSIITERRTETLAR
LFSTPTSSFSILLGKFFGTLLFSLIQFGVFVLATHYVFHVNWGENIFQMITVGTSYAICVSGLSMLIAAWIHEEKTADLM
GGIGVQLLALLGGSMLPLYAFPDSLQTIAHIAPNKWALTSFLNIMSGTSWSTLLPVILSLASAGFVSVIIGTVRLRMR
>Mature_398_residues
MKSLIVAWKDVKIRIIDRRGVMMMLLMPLLLTAILGSALSNIFDNGGLPKTVIGYYQEGPDEFGEMLRKDILQSKEIEKD
IKVEMVTSQSELEDLLKKQKIDVGVIIPSGWSEQIEEGTLKEAKLMTNPAKGIQAKIAESVIRSFTEQAQTIAVSTQVVI
TELAKSQPKNIEQIAKEVSTNLQTVATSDRDEVEKGTIGKKTVTAMQYYAAAMVVMFLLFNITVGAKSIITERRTETLAR
LFSTPTSSFSILLGKFFGTLLFSLIQFGVFVLATHYVFHVNWGENIFQMITVGTSYAICVSGLSMLIAAWIHEEKTADLM
GGIGVQLLALLGGSMLPLYAFPDSLQTIAHIAPNKWALTSFLNIMSGTSWSTLLPVILSLASAGFVSVIIGTVRLRMR

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 43738; Mature: 43738

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLIVAWKDVKIRIIDRRGVMMMLLMPLLLTAILGSALSNIFDNGGLPKTVIGYYQEGP
CCCEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCH
DEFGEMLRKDILQSKEIEKDIKVEMVTSQSELEDLLKKQKIDVGVIIPSGWSEQIEEGTL
HHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCH
KEAKLMTNPAKGIQAKIAESVIRSFTEQAQTIAVSTQVVITELAKSQPKNIEQIAKEVST
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
NLQTVATSDRDEVEKGTIGKKTVTAMQYYAAAMVVMFLLFNITVGAKSIITERRTETLAR
CHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LFSTPTSSFSILLGKFFGTLLFSLIQFGVFVLATHYVFHVNWGENIFQMITVGTSYAICV
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHCCHHHHHH
SGLSMLIAAWIHEEKTADLMGGIGVQLLALLGGSMLPLYAFPDSLQTIAHIAPNKWALTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCHHHHH
FLNIMSGTSWSTLLPVILSLASAGFVSVIIGTVRLRMR
HHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSLIVAWKDVKIRIIDRRGVMMMLLMPLLLTAILGSALSNIFDNGGLPKTVIGYYQEGP
CCCEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCH
DEFGEMLRKDILQSKEIEKDIKVEMVTSQSELEDLLKKQKIDVGVIIPSGWSEQIEEGTL
HHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCH
KEAKLMTNPAKGIQAKIAESVIRSFTEQAQTIAVSTQVVITELAKSQPKNIEQIAKEVST
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
NLQTVATSDRDEVEKGTIGKKTVTAMQYYAAAMVVMFLLFNITVGAKSIITERRTETLAR
CHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LFSTPTSSFSILLGKFFGTLLFSLIQFGVFVLATHYVFHVNWGENIFQMITVGTSYAICV
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHCCHHHHHH
SGLSMLIAAWIHEEKTADLMGGIGVQLLALLGGSMLPLYAFPDSLQTIAHIAPNKWALTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCHHHHH
FLNIMSGTSWSTLLPVILSLASAGFVSVIIGTVRLRMR
HHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]