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The map label for this gene is yvkB [H]

Identifier: 152974039

GI number: 152974039

Start: 204687

End: 205268

Strand: Direct

Name: yvkB [H]

Synonym: Bcer98_0194

Alternate gene names: 152974039

Gene position: 204687-205268 (Clockwise)

Preceding gene: 152974038

Following gene: 152974040

Centisome position: 5.01

GC content: 33.68

Gene sequence:

>582_bases
ATGGCGCGCTCAAAGACAGCAGAAAAAATTATTCAAGCAGCAATTGAATTAGTGAAAGAAAGAGGATATAAAGCAGCGAC
AACGAGAGAAATTGCGATGCGTGCTGGTGTCAATGAAGTGACAATCTTTCGTAATTTTAAAAATAAGAAAGGGGTCATTG
AAGCAGCCGTTGCTGAATTTTCATATGTGCCGCATTTAAAACATTTTTTACAAACAAGAATTGTATGGGAGTTAGAGACA
GACTTAAAGAATTTAGCAAGGCATTATCATCAATTTTTGAATGAAGTGAAAGATATCATCGCGATCGGTATTCGTGAAAC
AGGTGCGTTTCCGGAGTTAGATGATGAAATCGCCAAAATACCAAAGGGTTTAAAGGAAGAATTAATGATTTATTTTACAG
AAATGCAGAAAAAGGGAAAAATCATTGATACGAATATTGAAGCACAAGTCATGAATTTTATATGGATTAACTTTGGATAT
TTTCTCTCTAAAATGCGTTTTGAAAATCGATTGATGGAGATGAATGATGAAGATTTTATTGAAAATAATATAACTTTATA
TGCTAGGGCATTAAGACCCTAG

Upstream 100 bases:

>100_bases
ATATCGATCTTACTAATTTACAGGAAATGAATTGACAATAATTAGAAAAAAGTGTACTATGGATTGCAAGTGATCACTTG
CATAAGGAAGAGAGGATTGT

Downstream 100 bases:

>100_bases
TATTTATTTAAAATAAAATGCAAGTATGTACTTGCTTGCTAGAAGGGGTTGGGAAAATGAATACGTTGAAACAATTTTTA
AGAGTACCAGGTACGTATAT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MARSKTAEKIIQAAIELVKERGYKAATTREIAMRAGVNEVTIFRNFKNKKGVIEAAVAEFSYVPHLKHFLQTRIVWELET
DLKNLARHYHQFLNEVKDIIAIGIRETGAFPELDDEIAKIPKGLKEELMIYFTEMQKKGKIIDTNIEAQVMNFIWINFGY
FLSKMRFENRLMEMNDEDFIENNITLYARALRP

Sequences:

>Translated_193_residues
MARSKTAEKIIQAAIELVKERGYKAATTREIAMRAGVNEVTIFRNFKNKKGVIEAAVAEFSYVPHLKHFLQTRIVWELET
DLKNLARHYHQFLNEVKDIIAIGIRETGAFPELDDEIAKIPKGLKEELMIYFTEMQKKGKIIDTNIEAQVMNFIWINFGY
FLSKMRFENRLMEMNDEDFIENNITLYARALRP
>Mature_192_residues
ARSKTAEKIIQAAIELVKERGYKAATTREIAMRAGVNEVTIFRNFKNKKGVIEAAVAEFSYVPHLKHFLQTRIVWELETD
LKNLARHYHQFLNEVKDIIAIGIRETGAFPELDDEIAKIPKGLKEELMIYFTEMQKKGKIIDTNIEAQVMNFIWINFGYF
LSKMRFENRLMEMNDEDFIENNITLYARALRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22564; Mature: 22432

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARSKTAEKIIQAAIELVKERGYKAATTREIAMRAGVNEVTIFRNFKNKKGVIEAAVAEF
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH
SYVPHLKHFLQTRIVWELETDLKNLARHYHQFLNEVKDIIAIGIRETGAFPELDDEIAKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
PKGLKEELMIYFTEMQKKGKIIDTNIEAQVMNFIWINFGYFLSKMRFENRLMEMNDEDFI
CCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ENNITLYARALRP
HCCCEEEEEECCC
>Mature Secondary Structure 
ARSKTAEKIIQAAIELVKERGYKAATTREIAMRAGVNEVTIFRNFKNKKGVIEAAVAEF
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH
SYVPHLKHFLQTRIVWELETDLKNLARHYHQFLNEVKDIIAIGIRETGAFPELDDEIAKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
PKGLKEELMIYFTEMQKKGKIIDTNIEAQVMNFIWINFGYFLSKMRFENRLMEMNDEDFI
CCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ENNITLYARALRP
HCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]