| Definition | Bacillus cereus subsp. cytotoxis NVH 391-98, complete genome. |
|---|---|
| Accession | NC_009674 |
| Length | 4,087,024 |
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The map label for this gene is clpC [H]
Identifier: 152973929
GI number: 152973929
Start: 95952
End: 98387
Strand: Direct
Name: clpC [H]
Synonym: Bcer98_0076
Alternate gene names: 152973929
Gene position: 95952-98387 (Clockwise)
Preceding gene: 152973928
Following gene: 152973930
Centisome position: 2.35
GC content: 39.08
Gene sequence:
>2436_bases ATGATGTTTGGAAGATTTACAGAACGAGCGCAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATCCGTATTGGTCATAA TAATATTGGAACAGAGCATATTTTACTTGGGCTAGTACGTGAAGGTGAAGGTATTGCAGCGAAAGCATTAATTGCTCTTG GCTTAAGTCCAGAGAAGATACAAAAAGAAGTAGAGGCATTAATTGGTCGTGGTACAGAAGTATCTCAGACTGTTCATTAT ACTCCTCGTGCGAAAAAGGTCATTGAATTATCCATGGATGAAGCACGTAAATTAGGTCATTCTTATGTTGGAACGGAGCA TATCTTACTAGGATTAATTCGTGAAGGAGAAGGCGTTGCAGCGCGTGTTTTAAATAACTTAGGTGTAAGTTTAAATAAGG CGAGACAACAAGTGTTACAACTTCTTGGAAGCAATGAAGCAGCTTCAGGTCATCAAGGTGCTTCATCGACAAATGCCAAT ACACCAACTTTGGATAGCTTAGCACGTGATTTAACAGTAATTGCACGTGAAAGTAGATTAGATCCTGTTATTGGGCGCAG TAAGGAAATTCAACGGGTTATTGAGGTGTTAAGCCGTAGAACAAAAAATAACCCGGTGCTAATTGGGGAGCCAGGTGTAG GTAAGACTGCAATCGCAGAAGGTTTAGCGCAACAAATTGTAAATAACGAAGTTCCGGAAACATTACGAGATAAACGTGTT ATGACATTAGATATGGGAACAGTTGTAGCTGGTACAAAATATCGTGGTGAGTTTGAGGATCGTTTAAAAAAAGTAATGGA TGAGATTCGTCAGGCAGGTAACATTATTTTATTTATTGACGAACTTCATACATTAATTGGTGCAGGCGGTGCAGAAGGGG CAATTGATGCATCGAATATTTTAAAACCTTCGCTAGCGCGTGGCGAACTACAATGTATTGGTGCGACAACTTTAGATGAG TATCGAAAATATATTGAAAAAGACGCAGCGTTAGAGCGACGCTTCCAACCAATTCAAGTGGATGAACCAAGCTTGGAAGA ATCTATTCAAATTTTGAAAGGGTTGCGTGATCGATATGAAGCGCATCACCGTGTATCTATTACAGATGATGCAATCGAGG TAGCGGTAAAGCTTTCAGATCGCTATATTACAGATCGCTTCTTACCGGATAAAGCAATCGATTTAATTGATGAGGCGGCT TCTAAAGTACGTTTACGTTCTTATACAACGCCACCAAACTTAAAAGAATTAGAAGTGAAACTTGAGGAAATTCGTAAAGA AAAAGATGCAGCTGTGCAGAGTCAAGAATTCGAAAAAGCTGCTTCATTACGAGATATGGAGCAACGTTTACGTGAAAAAT TAGAGGATACAAAACGTCAGTGGAAAGAACAGCAAGGAAAAGAAAACTCTGAAGTGACAGTAGAGGATATTGCAAACGTT GTTTCTACATGGACGCGTATTCCAGTTTCTAAGCTTGCGCAAACAGAAACGGATAAATTGTTAAACTTAGAATCCATTTT ACATGATCGTGTAATCGGTCAAGATGAAGCTGTTGTAGCTGTAGCGAAGGCGGTACGTCGTGCAAGAGCTGGCTTAAAAG ATCCAAAACGTCCAATTGGTTCCTTTATTTTCTTAGGACCAACTGGTGTTGGGAAAACAGAATTAGCACGAGCATTAGCG GAATCTATGTTCGGTGATGAGGATGCTATGATCCGCATCGACATGTCGGAATATATGGAGAAACATTCTACATCTCGTTT AGTTGGTTCTCCTCCAGGATATGTAGGATATGAAGAGGGCGGTCAATTAACAGAGAAGGTTCGTCGTAAACCGTATTCTG TTGTTCTATTAGATGAAGTAGAAAAAGCACATCCAGATGTATTTAATATTTTATTACAAGTATTAGAAGACGGCCGTTTG ACAGACTCTAAAGGTCGCACAGTTGATTTCCGTAATACAATTGTGATTATGACTTCTAACGTTGGTGCTGAGGCATTAAA ACGCAATAAACATCTTGGATTTAACGTGCAAGATGAGAGCCGTGACTATGCAGATATGAAAGGAAAAGTAATGGACGAAT TGAAAAAAGCATTCCGTCCAGAATTCTTGAACCGTATCGATGAAATCATTGTGTTCCATATGCTTGAGAAAAAACATATT CAAGAAATTGTGACACTAATGGTAAATCAACTAGTAAAACGATTAGAAGAACAAGAGATTTATTTAGAGTTAACGGACGC TGCAATTGAAGCGATTGCTGATAAAGGGTTCGATCGCGAGTATGGTGCTCGTCCACTTCGCAGAGCAATTCAGAAACATG TGGAAGATCGATTATCAGAAGAACTTCTAAAAGGAGTCATTGAGAAAGGACAAAAAGTTATCTTTGATAAAGAGAGAGAA TCATTTGTCATTCGCAGTGCAGAAAAGGTAAAATAA
Upstream 100 bases:
>100_bases TGGACAACTGGGACCAGAAGAAAGAGATTATCGAAGGGCAGCTTTAATCCGTGAAAGATTACGCATTGAAGAAAATGAAG CATAGTAGGAGGCGATTTCT
Downstream 100 bases:
>100_bases GTATAGAAAAACAAGGGGGGCTATTCGATAGCCCTCTTTCTTATACGAGCTATATGTTTATGAAAGTGAAGTGAAGTATA GAAGAATATGGCTAAGAAGA
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 811; Mature: 811
Protein sequence:
>811_residues MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKIQKEVEALIGRGTEVSQTVHY TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEAASGHQGASSTNAN TPTLDSLARDLTVIARESRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE YRKYIEKDAALERRFQPIQVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIEVAVKLSDRYITDRFLPDKAIDLIDEAA SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV VSTWTRIPVSKLAQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL TDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYADMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI QEIVTLMVNQLVKRLEEQEIYLELTDAAIEAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGVIEKGQKVIFDKERE SFVIRSAEKVK
Sequences:
>Translated_811_residues MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKIQKEVEALIGRGTEVSQTVHY TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEAASGHQGASSTNAN TPTLDSLARDLTVIARESRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE YRKYIEKDAALERRFQPIQVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIEVAVKLSDRYITDRFLPDKAIDLIDEAA SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV VSTWTRIPVSKLAQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL TDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYADMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI QEIVTLMVNQLVKRLEEQEIYLELTDAAIEAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGVIEKGQKVIFDKERE SFVIRSAEKVK >Mature_811_residues MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKIQKEVEALIGRGTEVSQTVHY TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEAASGHQGASSTNAN TPTLDSLARDLTVIARESRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE YRKYIEKDAALERRFQPIQVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIEVAVKLSDRYITDRFLPDKAIDLIDEAA SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV VSTWTRIPVSKLAQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL TDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYADMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI QEIVTLMVNQLVKRLEEQEIYLELTDAAIEAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGVIEKGQKVIFDKERE SFVIRSAEKVK
Specific function: Competence gene repressor; required for cell growth at high temperature. Negative regulator of comK expression. May interact with MecA to negatively regulate comK [H]
COG id: COG0542
COG function: function code O; ATPases with chaperone activity, ATP-binding subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 UVR domain [H]
Homologues:
Organism=Homo sapiens, GI13540606, Length=308, Percent_Identity=39.2857142857143, Blast_Score=210, Evalue=4e-54, Organism=Escherichia coli, GI1788943, Length=862, Percent_Identity=48.9559164733179, Blast_Score=751, Evalue=0.0, Organism=Escherichia coli, GI1787109, Length=806, Percent_Identity=39.3300248138958, Blast_Score=519, Evalue=1e-148, Organism=Saccharomyces cerevisiae, GI6320464, Length=695, Percent_Identity=48.4892086330935, Blast_Score=644, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6323002, Length=870, Percent_Identity=37.816091954023, Blast_Score=536, Evalue=1e-153,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR013093 - InterPro: IPR003959 - InterPro: IPR018368 - InterPro: IPR001270 - InterPro: IPR019489 - InterPro: IPR004176 - InterPro: IPR023150 - InterPro: IPR001943 [H]
Pfam domain/function: PF00004 AAA; PF07724 AAA_2; PF02861 Clp_N; PF10431 ClpB_D2-small; PF02151 UVR [H]
EC number: NA
Molecular weight: Translated: 90890; Mature: 90890
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS50151 UVR ; PS00870 CLPAB_1 ; PS00871 CLPAB_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKI CCCCHHHHHHHHHHHHCHHHHHEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHH QKEVEALIGRGTEVSQTVHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVA HHHHHHHHCCCCCHHHHEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHH ARVLNNLGVSLNKARQQVLQLLGSNEAASGHQGASSTNANTPTLDSLARDLTVIARESRL HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC DPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV CCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHCCEE MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNI EEEECCCEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHCCCCCCCCCCHHHH LKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDEPSLEESIQILKGLRDRYE CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH AHHRVSITDDAIEVAVKLSDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVK CCCCEEECHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHH VSTWTRIPVSKLAQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIG HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC SFIFLGPTGVGKTELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEG CEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCCCCC GQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSN CHHHHHHHCCCCEEEEEHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEECC VGAEALKRNKHLGFNVQDESRDYADMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI CCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH QEIVTLMVNQLVKRLEEQEIYLELTDAAIEAIADKGFDREYGARPLRRAIQKHVEDRLSE HHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH ELLKGVIEKGQKVIFDKERESFVIRSAEKVK HHHHHHHHCCCEEEECCCHHHHHHCCHHHCC >Mature Secondary Structure MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKI CCCCHHHHHHHHHHHHCHHHHHEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHH QKEVEALIGRGTEVSQTVHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVA HHHHHHHHCCCCCHHHHEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHH ARVLNNLGVSLNKARQQVLQLLGSNEAASGHQGASSTNANTPTLDSLARDLTVIARESRL HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC DPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV CCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHCCEE MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNI EEEECCCEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHCCCCCCCCCCHHHH LKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDEPSLEESIQILKGLRDRYE CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH AHHRVSITDDAIEVAVKLSDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVK CCCCEEECHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHH VSTWTRIPVSKLAQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIG HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC SFIFLGPTGVGKTELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEG CEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCCCCC GQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSN CHHHHHHHCCCCEEEEEHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEECC VGAEALKRNKHLGFNVQDESRDYADMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI CCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH QEIVTLMVNQLVKRLEEQEIYLELTDAAIEAIADKGFDREYGARPLRRAIQKHVEDRLSE HHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH ELLKGVIEKGQKVIFDKERESFVIRSAEKVK HHHHHHHHCCCEEEECCCHHHHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8016066; 7584024; 9384377; 8195092 [H]