| Definition | Klebsiella pneumoniae subsp. pneumoniae MGH 78578 chromosome, complete genome. |
|---|---|
| Accession | NC_009648 |
| Length | 5,315,120 |
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The map label for this gene is uidR [C]
Identifier: 152969615
GI number: 152969615
Start: 1209725
End: 1210318
Strand: Direct
Name: uidR [C]
Synonym: KPN_01061
Alternate gene names: 152969615
Gene position: 1209725-1210318 (Clockwise)
Preceding gene: 152969614
Following gene: 152969617
Centisome position: 22.76
GC content: 58.25
Gene sequence:
>594_bases GTGTCAGAAGGAAAAGTCCAGCAGAAACAGCAGGCGCGCCGCGCGGAGATCGTTGTCGCTGCGCAAAAATGTTTCGCTGA AAAGGGGCTGCACGGCGCTTCCGTCGCCGATATCGCCCGGGAAGCGGGCCTGAGCGTCGGTCAGCTATATCGCATTTTTG CCAGCAAGGAAGCGATCATCGAAGCGATTGTTAGCGAAATCGTCAACGCCAGAGTCGGGGAGATGATCGATGAGAACCAC AATCTGGCGCGTAAAGCGGCGGTTTTGGCTGGCAGGATCCCGACGTCGGCAGCCACCAAAAGCGATAATTATCTGCTGAT GGAGATCAATGCCGAGGCCTCGCGTAACCCCCGCTTGCGTGAGATCCTGATGCAGGCAGATCGGCGGTTGAAAGAGGAGG GCGGTCGCCTGTCGCAGCGCTACCATCCCGGGCTCAGCGATGCGCGACGCAATGCCGCATCAGAGCTCATCGCCGTTCTG ACAGAGGGGGCAGCCTACCGCTGTGAGCTGAGCGCCTCCACCCCGGTCGATAAGGCAGATTTAGAAGCCCTGTACAATAT GATTTTCGACCGGCTTTTTGACGAGCAGGCATAA
Upstream 100 bases:
>100_bases TATCTATCGCCGCCTGCTGGCGTCATACCCCTGATTCAACAGAATAGGCTATGATAACCGCCAGTCTTGACGGGAATGAT GGGTAGCAGGAGGGAGCAGG
Downstream 100 bases:
>100_bases TACGGCACGCCTGGCGTGCCGCACAGGCTAATGGTTAGCTGGCCGAGGCTGGGGTTTTGGCCGGTTTGTTCATCGGTTTT CCGGAGAACAGGAAACGCAG
Product: putative regulatory protein TetR
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator EefR
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MSEGKVQQKQQARRAEIVVAAQKCFAEKGLHGASVADIAREAGLSVGQLYRIFASKEAIIEAIVSEIVNARVGEMIDENH NLARKAAVLAGRIPTSAATKSDNYLLMEINAEASRNPRLREILMQADRRLKEEGGRLSQRYHPGLSDARRNAASELIAVL TEGAAYRCELSASTPVDKADLEALYNMIFDRLFDEQA
Sequences:
>Translated_197_residues MSEGKVQQKQQARRAEIVVAAQKCFAEKGLHGASVADIAREAGLSVGQLYRIFASKEAIIEAIVSEIVNARVGEMIDENH NLARKAAVLAGRIPTSAATKSDNYLLMEINAEASRNPRLREILMQADRRLKEEGGRLSQRYHPGLSDARRNAASELIAVL TEGAAYRCELSASTPVDKADLEALYNMIFDRLFDEQA >Mature_196_residues SEGKVQQKQQARRAEIVVAAQKCFAEKGLHGASVADIAREAGLSVGQLYRIFASKEAIIEAIVSEIVNARVGEMIDENHN LARKAAVLAGRIPTSAATKSDNYLLMEINAEASRNPRLREILMQADRRLKEEGGRLSQRYHPGLSDARRNAASELIAVLT EGAAYRCELSASTPVDKADLEALYNMIFDRLFDEQA
Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21642; Mature: 21511
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEGKVQQKQQARRAEIVVAAQKCFAEKGLHGASVADIAREAGLSVGQLYRIFASKEAII CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH EAIVSEIVNARVGEMIDENHNLARKAAVLAGRIPTSAATKSDNYLLMEINAEASRNPRLR HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHHH EILMQADRRLKEEGGRLSQRYHPGLSDARRNAASELIAVLTEGAAYRCELSASTPVDKAD HHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHH LEALYNMIFDRLFDEQA HHHHHHHHHHHHHHCCC >Mature Secondary Structure SEGKVQQKQQARRAEIVVAAQKCFAEKGLHGASVADIAREAGLSVGQLYRIFASKEAII CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH EAIVSEIVNARVGEMIDENHNLARKAAVLAGRIPTSAATKSDNYLLMEINAEASRNPRLR HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHHH EILMQADRRLKEEGGRLSQRYHPGLSDARRNAASELIAVLTEGAAYRCELSASTPVDKAD HHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHH LEALYNMIFDRLFDEQA HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA