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The map label for this gene is ycdZ [H]

Identifier: 152969613

GI number: 152969613

Start: 1208499

End: 1208981

Strand: Direct

Name: ycdZ [H]

Synonym: KPN_01059

Alternate gene names: 152969613

Gene position: 1208499-1208981 (Clockwise)

Preceding gene: 152969612

Following gene: 152969614

Centisome position: 22.74

GC content: 61.49

Gene sequence:

>483_bases
ATGAACATACTCTTCGCAATCGCATTAACGACAGGCATCCTCTCCGGGATTTGGGGGTGGGTGGCGGTCGCTCTCGGCCT
GCTGAGCTGGGCCGGATTCCTCGGCTGTACGGCCTATTTCGCCTGCCCGCAGGGCGGCTTGAAAGGGCTGGCCATCTCGT
CCTGCACGGTGATGAGCGGCGTGGCCTGGGCGTTAGTGATTATCCACGGTAGCGCGCTGGCGCCACAGGTGCAGATCCTC
AGCTATATGATGACCGGTGTGGTCGCCTTCCTGATGTGCATTCAGGCGCGACGGACGCTACTGTCGTTTGTCCCGGGCAC
CTTTATCGGCGCCTGCGCGACCTTCGCGGCAGACGGCGACTGGCGTCTGGTGATCCCTTCCCTGGCGCTGGGTCTGGTCT
TTGGCTATGCCATGAAAAATAGTGGCCTGTGGCTGGCGGCCCGTGCGGATAAGCATAAATCGTTCGCCAACGACAACGCC
TGA

Upstream 100 bases:

>100_bases
GTGATGCAAATCACCATATGAATGCAACTGAAAGAAAGTTCATTCATATACTGTGTTTTAGATCGCATTCTTCCGGCGCG
TATCTGCTAGGATACGCGCC

Downstream 100 bases:

>100_bases
TCGGCGGGACGACTAAAAAACAGGACCTTACGGGTCCTGTTTTTTTATCTTCTCGTCACCGGACAAAGCGATAATCTTGC
TCCCGCAGGCGAGAATGCCC

Product: putative transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MNILFAIALTTGILSGIWGWVAVALGLLSWAGFLGCTAYFACPQGGLKGLAISSCTVMSGVAWALVIIHGSALAPQVQIL
SYMMTGVVAFLMCIQARRTLLSFVPGTFIGACATFAADGDWRLVIPSLALGLVFGYAMKNSGLWLAARADKHKSFANDNA

Sequences:

>Translated_160_residues
MNILFAIALTTGILSGIWGWVAVALGLLSWAGFLGCTAYFACPQGGLKGLAISSCTVMSGVAWALVIIHGSALAPQVQIL
SYMMTGVVAFLMCIQARRTLLSFVPGTFIGACATFAADGDWRLVIPSLALGLVFGYAMKNSGLWLAARADKHKSFANDNA
>Mature_160_residues
MNILFAIALTTGILSGIWGWVAVALGLLSWAGFLGCTAYFACPQGGLKGLAISSCTVMSGVAWALVIIHGSALAPQVQIL
SYMMTGVVAFLMCIQARRTLLSFVPGTFIGACATFAADGDWRLVIPSLALGLVFGYAMKNSGLWLAARADKHKSFANDNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yahC [H]

Homologues:

Organism=Escherichia coli, GI87081825, Length=161, Percent_Identity=77.639751552795, Blast_Score=255, Evalue=1e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009476 [H]

Pfam domain/function: PF06496 DUF1097 [H]

EC number: NA

Molecular weight: Translated: 16764; Mature: 16764

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILFAIALTTGILSGIWGWVAVALGLLSWAGFLGCTAYFACPQGGLKGLAISSCTVMSG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
VAWALVIIHGSALAPQVQILSYMMTGVVAFLMCIQARRTLLSFVPGTFIGACATFAADGD
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
WRLVIPSLALGLVFGYAMKNSGLWLAARADKHKSFANDNA
CEEHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCCCC
>Mature Secondary Structure
MNILFAIALTTGILSGIWGWVAVALGLLSWAGFLGCTAYFACPQGGLKGLAISSCTVMSG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
VAWALVIIHGSALAPQVQILSYMMTGVVAFLMCIQARRTLLSFVPGTFIGACATFAADGD
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
WRLVIPSLALGLVFGYAMKNSGLWLAARADKHKSFANDNA
CEEHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677609; 9457880 [H]