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The map label for this gene is ycdX [C]

Identifier: 152969611

GI number: 152969611

Start: 1207081

End: 1207818

Strand: Direct

Name: ycdX [C]

Synonym: KPN_01057

Alternate gene names: 152969611

Gene position: 1207081-1207818 (Clockwise)

Preceding gene: 152969610

Following gene: 152969612

Centisome position: 22.71

GC content: 57.45

Gene sequence:

>738_bases
ATGTATCCCGTTGACCTGCACATGCATACCGTCGCCAGCACCCATGCCTACAGCACCCTGCACGATTATATTGCGGAAGC
AAAGCGTAAAGGGATCAAACTCTTCGCCATCACCGACCACGGCCCGGACATGGCGGATGCTCCGCACTACTGGCACTTCG
TTAATATGCGCATCTGGCCCCGCCTGGTAGACGGGGTGGGGATCCTGCGCGGTATTGAGTCGAATATTAAAAATATTGAA
GGCGAGATCGACTGTTCCGGACCGATGTTGACTTCCCTCGATCTGATCATCGCCGGATTTCATGAGCCGGTGTTTCCGCC
GCAGGATCGTGACACCCATACACAGGCGATGATAGCCGCGATGGCCAGCGGTAAAGTGCATATGATTAGCCATCCGGGTA
ATCCGAAATTCCCGGTGGATATCCCGGCCATTGCCGAAGCGGCGGCTCGCTACCAGGTGGCGCTGGAGATTAATAACTCC
TCGTTCGTATCATCGCGCATGGGCAGTGAAGACAACTGCCGGGCCATCGCCGCCGCAGTGCGTGATGCCGGGGGATGGGT
GGCGCTGGGCTCGGACTCTCACACCGCCTTTACCCTCGGGGAATTTACCGAATGCCGCAAGATCCTTGATGCGGTCGATT
TCCCGGAGGAGAGGATCCTCAACGTTTCTCCGCGTCGCCTGCTTAACTTCCTCGAGTCGCGGGGCATGCCGGCGATCCCG
GAATTTGCTGACCTTTAA

Upstream 100 bases:

>100_bases
CGCGGTTATTAAGACGAGAGAACCCCGCCACGGCGGGGTTTTTGCTAATCAATAGCCCGGTTTCCTGCTATTCTTGCGGC
AAACAGAAGAGGAGAATGTG

Downstream 100 bases:

>100_bases
TTTGTATAACTGGAATAACTGAATGAACGAGTTTTCAATCCTCTGCCGCGTGCTGGGTTCGCTGTATTACCGTCAACCGC
AGGACCCGCTGCTGGTGCCG

Product: putative hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MYPVDLHMHTVASTHAYSTLHDYIAEAKRKGIKLFAITDHGPDMADAPHYWHFVNMRIWPRLVDGVGILRGIESNIKNIE
GEIDCSGPMLTSLDLIIAGFHEPVFPPQDRDTHTQAMIAAMASGKVHMISHPGNPKFPVDIPAIAEAAARYQVALEINNS
SFVSSRMGSEDNCRAIAAAVRDAGGWVALGSDSHTAFTLGEFTECRKILDAVDFPEERILNVSPRRLLNFLESRGMPAIP
EFADL

Sequences:

>Translated_245_residues
MYPVDLHMHTVASTHAYSTLHDYIAEAKRKGIKLFAITDHGPDMADAPHYWHFVNMRIWPRLVDGVGILRGIESNIKNIE
GEIDCSGPMLTSLDLIIAGFHEPVFPPQDRDTHTQAMIAAMASGKVHMISHPGNPKFPVDIPAIAEAAARYQVALEINNS
SFVSSRMGSEDNCRAIAAAVRDAGGWVALGSDSHTAFTLGEFTECRKILDAVDFPEERILNVSPRRLLNFLESRGMPAIP
EFADL
>Mature_245_residues
MYPVDLHMHTVASTHAYSTLHDYIAEAKRKGIKLFAITDHGPDMADAPHYWHFVNMRIWPRLVDGVGILRGIESNIKNIE
GEIDCSGPMLTSLDLIIAGFHEPVFPPQDRDTHTQAMIAAMASGKVHMISHPGNPKFPVDIPAIAEAAARYQVALEINNS
SFVSSRMGSEDNCRAIAAAVRDAGGWVALGSDSHTAFTLGEFTECRKILDAVDFPEERILNVSPRRLLNFLESRGMPAIP
EFADL

Specific function: Unknown

COG id: COG1387

COG function: function code ER; Histidinol phosphatase and related hydrolases of the PHP family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PHP family

Homologues:

Organism=Escherichia coli, GI1787271, Length=245, Percent_Identity=82.8571428571429, Blast_Score=416, Evalue=1e-117,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1029_KLEP7 (A6T7B9)

Other databases:

- EMBL:   CP000647
- RefSeq:   YP_001334720.1
- ProteinModelPortal:   A6T7B9
- SMR:   A6T7B9
- STRING:   A6T7B9
- GeneID:   5338214
- GenomeReviews:   CP000647_GR
- KEGG:   kpn:KPN_01057
- eggNOG:   COG1387
- HOGENOM:   HBG734021
- OMA:   HTIASTH
- ProtClustDB:   PRK09248
- HAMAP:   MF_01561
- InterPro:   IPR010140
- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195
- PANTHER:   PTHR21039
- SMART:   SM00481

Pfam domain/function: PF02811 PHP; SSF89550 PHP-like

EC number: NA

Molecular weight: Translated: 26974; Mature: 26974

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYPVDLHMHTVASTHAYSTLHDYIAEAKRKGIKLFAITDHGPDMADAPHYWHFVNMRIWP
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCEEEEECHHHHH
RLVDGVGILRGIESNIKNIEGEIDCSGPMLTSLDLIIAGFHEPVFPPQDRDTHTQAMIAA
HHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
MASGKVHMISHPGNPKFPVDIPAIAEAAARYQVALEINNSSFVSSRMGSEDNCRAIAAAV
HHCCCEEEEECCCCCCCCCCCHHHHHHHHEEEEEEEECCCHHHHHHCCCCCCHHHHHHHH
RDAGGWVALGSDSHTAFTLGEFTECRKILDAVDFPEERILNVSPRRLLNFLESRGMPAIP
HCCCCEEEECCCCCCEEEHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCCC
EFADL
HHHCC
>Mature Secondary Structure
MYPVDLHMHTVASTHAYSTLHDYIAEAKRKGIKLFAITDHGPDMADAPHYWHFVNMRIWP
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCEEEEECHHHHH
RLVDGVGILRGIESNIKNIEGEIDCSGPMLTSLDLIIAGFHEPVFPPQDRDTHTQAMIAA
HHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
MASGKVHMISHPGNPKFPVDIPAIAEAAARYQVALEINNSSFVSSRMGSEDNCRAIAAAV
HHCCCEEEEECCCCCCCCCCCHHHHHHHHEEEEEEEECCCHHHHHHCCCCCCHHHHHHHH
RDAGGWVALGSDSHTAFTLGEFTECRKILDAVDFPEERILNVSPRRLLNFLESRGMPAIP
HCCCCEEEECCCCCCEEEHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCCC
EFADL
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA