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The map label for this gene is oppA [H]

Identifier: 152969564

GI number: 152969564

Start: 1155596

End: 1157197

Strand: Direct

Name: oppA [H]

Synonym: KPN_01007

Alternate gene names: 152969564

Gene position: 1155596-1157197 (Clockwise)

Preceding gene: 152969561

Following gene: 152969572

Centisome position: 21.74

GC content: 57.49

Gene sequence:

>1602_bases
ATGCTGGCTATGAGCGGCGGGGCGCTGGCGGCGCAGGTGCCGCCGGGCACCCAGCTGGCGGAAAAGCAGGAGCTGGTCAG
AAATAACGGCAGTGAACCGGCGTCACTCGATCCGCATAAAGTCGAGAGCGATGTTGAATTCAATATCATTAGCGATCTCT
TTGAAGGGCTGGTTAACGTGTCGCCAGCGGGAGCGATCCAGCCGCGACTGGCGGAACGCTGGGAAAACAAAGACAACCTG
TTATGGACCTTTCATTTACGCCCCGGTCTGACCTGGTCCGACGGCACGGCCATTACAGCGCAGGATATCGTCTGGAGCTG
GCAACGACTGGTCTCGCCGGCAACAGCCTCCCCCTACGCGAGCTACCCTGGCAATATGCATATCGCCAACGCCCGCGAGA
TTGCCCTCGGGCAAAAGGGACCCGAGACGTTGGGGGTGAAAGCGCTGAACGACACCACGCTGCAGGTCACTCTGACCCAG
CCGAATGCCGCCTTCCTGGCGATGCTGGCGCACCCTTCGCTGGTACCGATCGACAAAGTGCTGGTGGAGCGGTATGCCGA
TAAATGGACCCGACCAGAGCATATCGTCACCAGCGGCCCGTATAAGCTGTCCCAATGGGTGGTGAATGAGCGGCTGGTGG
CTGAACGTAATGCAAAGTACTGGGATAATGCGCATACCGTTATTAATAAAGTGACTTACCTGCCAATCTCTTCGGAGGCC
GCCGATGTCAACCGCTACAAAGCAGGGGAGATTGATATTGTCTATACGGTGCCGATCAATCAGTTTGCGCAGTTGCAGAA
AACCATGGGCGACCAGCTGGACGTTTCGCCGCAGCTGGCGACCTATTACTACGAATTCAATACTACCCGGCCGCCGTTTA
ACGACGCCCGTGTGCGTCGCGCGCTGAATATGGCGCTTGATAAAGATATCATTGCCGGAAAAGTGCTTGGCCAGGGCCAG
CGCCCGGCCTGGCTGATCGGTCAGCCGGATATCGGCGGCGTGACGCTGCATAACCCGGACTACGCCAGCTGGCCGCGTGA
GAAACGGATTGCCGAGGCGAAAAAACTGCTGGCGCAGGCGGGGTATGATGAAAGCCATCCGCTGGTCTTTACCCTGCTCT
ATAACACCTCTGAGTCGCACCAGCGTATCGCCATTGCCGCCAGCTCTATGTGGAAGAAAAACCTCGGCGTCGAGGCGAAG
CTACAGAACCAAGAGTGGAAGACGATGCTGGATACCATGCATACGCATAACTTCGACGCCGTCCGCTACGCGTGGATTGC
CGACTACGACGATGCCGCCACCTTCCTCAATACTTTCCGTACCGGGGATAGCGAGAACACCAGTCAGTACAGCAACCCTG
CTTACGATGAGGCCCTGCGCAATGCGGCGAAAGCCTCCGACGTGGCGACCCGGGGCAAATACTATCAGCAGGCGGAAGAT
CTGCTGGCGCAGGATGTTCCCGCCATTCCGGTCTATCACTATGTACGTACCCATCTGGTGAAACCTTGGGTAGGGGGCTT
CACGCCGGATAAGCTGGGGTATTACTACACCAAAGACATGTACATTAAAAAACACCCATCCGCCAGCGGCGATGGGCGTT
GA

Upstream 100 bases:

>100_bases
ACTAAGTGTGGAAGAGGGGGATTACCCCGTACGTCAAAGGCAAAGGGAAATGACATTACACAAAAAAAATCACATCACCC
GAACACTCCTGGCTGTCAGT

Downstream 100 bases:

>100_bases
TTTTCTGTGCAAACTGCCTGAAATTCAGACGAATAACACAAAATTGTTTGTTTTTAAGGCAGTTGATCAAAATGATGCTT
TACAGCATCCGCCGAGGTGT

Product: putative extracellular solute-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MLAMSGGALAAQVPPGTQLAEKQELVRNNGSEPASLDPHKVESDVEFNIISDLFEGLVNVSPAGAIQPRLAERWENKDNL
LWTFHLRPGLTWSDGTAITAQDIVWSWQRLVSPATASPYASYPGNMHIANAREIALGQKGPETLGVKALNDTTLQVTLTQ
PNAAFLAMLAHPSLVPIDKVLVERYADKWTRPEHIVTSGPYKLSQWVVNERLVAERNAKYWDNAHTVINKVTYLPISSEA
ADVNRYKAGEIDIVYTVPINQFAQLQKTMGDQLDVSPQLATYYYEFNTTRPPFNDARVRRALNMALDKDIIAGKVLGQGQ
RPAWLIGQPDIGGVTLHNPDYASWPREKRIAEAKKLLAQAGYDESHPLVFTLLYNTSESHQRIAIAASSMWKKNLGVEAK
LQNQEWKTMLDTMHTHNFDAVRYAWIADYDDAATFLNTFRTGDSENTSQYSNPAYDEALRNAAKASDVATRGKYYQQAED
LLAQDVPAIPVYHYVRTHLVKPWVGGFTPDKLGYYYTKDMYIKKHPSASGDGR

Sequences:

>Translated_533_residues
MLAMSGGALAAQVPPGTQLAEKQELVRNNGSEPASLDPHKVESDVEFNIISDLFEGLVNVSPAGAIQPRLAERWENKDNL
LWTFHLRPGLTWSDGTAITAQDIVWSWQRLVSPATASPYASYPGNMHIANAREIALGQKGPETLGVKALNDTTLQVTLTQ
PNAAFLAMLAHPSLVPIDKVLVERYADKWTRPEHIVTSGPYKLSQWVVNERLVAERNAKYWDNAHTVINKVTYLPISSEA
ADVNRYKAGEIDIVYTVPINQFAQLQKTMGDQLDVSPQLATYYYEFNTTRPPFNDARVRRALNMALDKDIIAGKVLGQGQ
RPAWLIGQPDIGGVTLHNPDYASWPREKRIAEAKKLLAQAGYDESHPLVFTLLYNTSESHQRIAIAASSMWKKNLGVEAK
LQNQEWKTMLDTMHTHNFDAVRYAWIADYDDAATFLNTFRTGDSENTSQYSNPAYDEALRNAAKASDVATRGKYYQQAED
LLAQDVPAIPVYHYVRTHLVKPWVGGFTPDKLGYYYTKDMYIKKHPSASGDGR
>Mature_533_residues
MLAMSGGALAAQVPPGTQLAEKQELVRNNGSEPASLDPHKVESDVEFNIISDLFEGLVNVSPAGAIQPRLAERWENKDNL
LWTFHLRPGLTWSDGTAITAQDIVWSWQRLVSPATASPYASYPGNMHIANAREIALGQKGPETLGVKALNDTTLQVTLTQ
PNAAFLAMLAHPSLVPIDKVLVERYADKWTRPEHIVTSGPYKLSQWVVNERLVAERNAKYWDNAHTVINKVTYLPISSEA
ADVNRYKAGEIDIVYTVPINQFAQLQKTMGDQLDVSPQLATYYYEFNTTRPPFNDARVRRALNMALDKDIIAGKVLGQGQ
RPAWLIGQPDIGGVTLHNPDYASWPREKRIAEAKKLLAQAGYDESHPLVFTLLYNTSESHQRIAIAASSMWKKNLGVEAK
LQNQEWKTMLDTMHTHNFDAVRYAWIADYDDAATFLNTFRTGDSENTSQYSNPAYDEALRNAAKASDVATRGKYYQQAED
LLAQDVPAIPVYHYVRTHLVKPWVGGFTPDKLGYYYTKDMYIKKHPSASGDGR

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, it binds peptides up to five amino acids long with high affinity [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787495, Length=525, Percent_Identity=53.9047619047619, Blast_Score=559, Evalue=1e-160,
Organism=Escherichia coli, GI87081878, Length=520, Percent_Identity=46.7307692307692, Blast_Score=468, Evalue=1e-133,
Organism=Escherichia coli, GI1789397, Length=518, Percent_Identity=44.980694980695, Blast_Score=446, Evalue=1e-126,
Organism=Escherichia coli, GI1789966, Length=551, Percent_Identity=27.0417422867514, Blast_Score=135, Evalue=6e-33,
Organism=Escherichia coli, GI1787052, Length=489, Percent_Identity=24.3353783231084, Blast_Score=135, Evalue=7e-33,
Organism=Escherichia coli, GI1787762, Length=516, Percent_Identity=25.3875968992248, Blast_Score=131, Evalue=8e-32,
Organism=Escherichia coli, GI1787551, Length=557, Percent_Identity=22.0825852782765, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1789887, Length=492, Percent_Identity=22.5609756097561, Blast_Score=88, Evalue=1e-18,

Paralogues:

None

Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 59592; Mature: 59592

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAMSGGALAAQVPPGTQLAEKQELVRNNGSEPASLDPHKVESDVEFNIISDLFEGLVNV
CEEECCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHCC
SPAGAIQPRLAERWENKDNLLWTFHLRPGLTWSDGTAITAQDIVWSWQRLVSPATASPYA
CCCCCCCHHHHHHCCCCCCEEEEEEECCCCEECCCCEEEHHHHHHHHHHHCCCCCCCCCC
SYPGNMHIANAREIALGQKGPETLGVKALNDTTLQVTLTQPNAAFLAMLAHPSLVPIDKV
CCCCCEEECCCHHEECCCCCCHHHCEEEECCCEEEEEEECCCHHHHHHHHCCCCCCHHHH
LVERYADKWTRPEHIVTSGPYKLSQWVVNERLVAERNAKYWDNAHTVINKVTYLPISSEA
HHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEECCCCC
ADVNRYKAGEIDIVYTVPINQFAQLQKTMGDQLDVSPQLATYYYEFNTTRPPFNDARVRR
CCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHH
ALNMALDKDIIAGKVLGQGQRPAWLIGQPDIGGVTLHNPDYASWPREKRIAEAKKLLAQA
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHC
GYDESHPLVFTLLYNTSESHQRIAIAASSMWKKNLGVEAKLQNQEWKTMLDTMHTHNFDA
CCCCCCCEEEEEEECCCCCCCEEEEEHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCC
VRYAWIADYDDAATFLNTFRTGDSENTSQYSNPAYDEALRNAAKASDVATRGKYYQQAED
EEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAQDVPAIPVYHYVRTHLVKPWVGGFTPDKLGYYYTKDMYIKKHPSASGDGR
HHHHCCCCCHHHHHHHHHHHCHHCCCCCCCCCCEEEEECEEEEECCCCCCCCC
>Mature Secondary Structure
MLAMSGGALAAQVPPGTQLAEKQELVRNNGSEPASLDPHKVESDVEFNIISDLFEGLVNV
CEEECCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHCC
SPAGAIQPRLAERWENKDNLLWTFHLRPGLTWSDGTAITAQDIVWSWQRLVSPATASPYA
CCCCCCCHHHHHHCCCCCCEEEEEEECCCCEECCCCEEEHHHHHHHHHHHCCCCCCCCCC
SYPGNMHIANAREIALGQKGPETLGVKALNDTTLQVTLTQPNAAFLAMLAHPSLVPIDKV
CCCCCEEECCCHHEECCCCCCHHHCEEEECCCEEEEEEECCCHHHHHHHHCCCCCCHHHH
LVERYADKWTRPEHIVTSGPYKLSQWVVNERLVAERNAKYWDNAHTVINKVTYLPISSEA
HHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEECCCCC
ADVNRYKAGEIDIVYTVPINQFAQLQKTMGDQLDVSPQLATYYYEFNTTRPPFNDARVRR
CCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHH
ALNMALDKDIIAGKVLGQGQRPAWLIGQPDIGGVTLHNPDYASWPREKRIAEAKKLLAQA
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHC
GYDESHPLVFTLLYNTSESHQRIAIAASSMWKKNLGVEAKLQNQEWKTMLDTMHTHNFDA
CCCCCCCEEEEEEECCCCCCCEEEEEHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCC
VRYAWIADYDDAATFLNTFRTGDSENTSQYSNPAYDEALRNAAKASDVATRGKYYQQAED
EEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAQDVPAIPVYHYVRTHLVKPWVGGFTPDKLGYYYTKDMYIKKHPSASGDGR
HHHHCCCCCHHHHHHHHHHHCHHCCCCCCCCCCEEEEECEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2821267; 3525163; 11677609; 8202710; 8747465; 10422831; 10438628 [H]