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The map label for this gene is tnpA [H]

Identifier: 152969517

GI number: 152969517

Start: 1087997

End: 1089265

Strand: Direct

Name: tnpA [H]

Synonym: KPN_00960

Alternate gene names: 152969517

Gene position: 1087997-1089265 (Clockwise)

Preceding gene: 152969516

Following gene: 152969520

Centisome position: 20.47

GC content: 52.64

Gene sequence:

>1269_bases
ATGCTTGACCTGCTGAATCTGCCAGGCATCAAGCCGGTCGATATGCGCCACGAAGGCAAGTGCCTTGTGATAGTTGCTGA
GCCGGTAACGGTCGAGGTGCCGTTATGTGGGGAGTGCAACATCCCTATGCACAGACACGGTACGCGCAAAAACAAGTTCA
TGGACACGCCGTTGTACATGGAGCCCGTCCGCCTTGAAGTTCAGCGCCCGCGCTTTCGCTGTGAGTCGTGCGGAAAAATG
TCCATGCCGGAGTTGAGTTTTCTGGATGACAAACGCCGAGCCACCAAACGGCTGGTCGATGTTATTCGGCAACAGTGCCT
GGGAACCACCTTCCATGCTTTAGCCGAGCAAACCGGTGTGGCGGTGAACACCGTCAAGAACATCGCTCGCGATCTCATTG
AGGAACTCTCCCAAACCGTTCGTTACGAAACCCCGGTCATCATGGGTATTGACGAAGTGAACCTAGCCGGAGGGTATCGC
TGTGTAATCACCAATCTGGCAACCAACAACGTCTTTGATATGTTGGAGCATCGTACTCAAGAGCATTTGAAGCCCTTCTT
CAAGGATTTGCCGGATGCTGACAAGGTGGAATGGGTCTGTACGGATATGTGGCGACCCTTCAAACGTTCCTTTGCTCAGT
ATCTGCCCAACGCCAAACTGGTGATCGACAAGTTCCATGTCGTCAAGATGGCCTCTGAAGCCTTGGAAGCGGAGCGCAAG
AACTATCAGGCACAGTTAAGCAAAGAAGATCGCATTTACGTCAAAAAGTCCATTCGCTGGCTCACCCTGAAGCGACCCGG
CAACCTAACGCCCGCAGAGCAAAAGGCGCTGGAGGTTGTAAAGCAGGCAATCCCAGCACTTGCCATGGCCTATGACTTCA
AGGAAGCCTTCTTCTGCATCTACGACGAACCCGACAAGCAGAGCGCTCAGAACGCCTTTGAGGCTTGGGAGAACAGCCTG
CCGCCTTATGGCATGGAGCCTTTCAAAAAACTGGTAAAAACGGTACACAACCATTACGACGACATCTTTGCCTACTGGGA
TGCGCCGTTCTCAATCACCAATGGCTATACCGAAGGGCTCAACGGCTTGATCAAGATGTCCAACCGGTTAGGTCGGGGTT
ATAGCTATGAGATCATCCGTGCAAAGACGTTGTACTCCAAAGAAGCCCGCAAGGTTGGCAGTGGTATTCGAGCAGGACGA
GGCAAGGTCGAGTATGGACCGCACATTCCGACATTGTTGAAGCAGGCAGAAGGTGGAGAGTTGGATTAA

Upstream 100 bases:

>100_bases
GTGCTCAAGTCTGACCGTCAGGGCATGACCGCATTGGTTGATATGGTGTATGACCTGCTGCGCGAAGGCAAAGACATCGA
TCTGGGTATGGATTAAGCCG

Downstream 100 bases:

>100_bases
CGCGAGAGAGGGCGCGTCTGAGAATCCAACCAATGTTAGATTTTCGCAGGGTGGTGAAAAGCAGAAAAATCCAACCAGAA
GCAGCTTTTTGTCCGACTAA

Product: putative transposase, IS204/IS1001/IS1096/IS1165

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MLDLLNLPGIKPVDMRHEGKCLVIVAEPVTVEVPLCGECNIPMHRHGTRKNKFMDTPLYMEPVRLEVQRPRFRCESCGKM
SMPELSFLDDKRRATKRLVDVIRQQCLGTTFHALAEQTGVAVNTVKNIARDLIEELSQTVRYETPVIMGIDEVNLAGGYR
CVITNLATNNVFDMLEHRTQEHLKPFFKDLPDADKVEWVCTDMWRPFKRSFAQYLPNAKLVIDKFHVVKMASEALEAERK
NYQAQLSKEDRIYVKKSIRWLTLKRPGNLTPAEQKALEVVKQAIPALAMAYDFKEAFFCIYDEPDKQSAQNAFEAWENSL
PPYGMEPFKKLVKTVHNHYDDIFAYWDAPFSITNGYTEGLNGLIKMSNRLGRGYSYEIIRAKTLYSKEARKVGSGIRAGR
GKVEYGPHIPTLLKQAEGGELD

Sequences:

>Translated_422_residues
MLDLLNLPGIKPVDMRHEGKCLVIVAEPVTVEVPLCGECNIPMHRHGTRKNKFMDTPLYMEPVRLEVQRPRFRCESCGKM
SMPELSFLDDKRRATKRLVDVIRQQCLGTTFHALAEQTGVAVNTVKNIARDLIEELSQTVRYETPVIMGIDEVNLAGGYR
CVITNLATNNVFDMLEHRTQEHLKPFFKDLPDADKVEWVCTDMWRPFKRSFAQYLPNAKLVIDKFHVVKMASEALEAERK
NYQAQLSKEDRIYVKKSIRWLTLKRPGNLTPAEQKALEVVKQAIPALAMAYDFKEAFFCIYDEPDKQSAQNAFEAWENSL
PPYGMEPFKKLVKTVHNHYDDIFAYWDAPFSITNGYTEGLNGLIKMSNRLGRGYSYEIIRAKTLYSKEARKVGSGIRAGR
GKVEYGPHIPTLLKQAEGGELD
>Mature_422_residues
MLDLLNLPGIKPVDMRHEGKCLVIVAEPVTVEVPLCGECNIPMHRHGTRKNKFMDTPLYMEPVRLEVQRPRFRCESCGKM
SMPELSFLDDKRRATKRLVDVIRQQCLGTTFHALAEQTGVAVNTVKNIARDLIEELSQTVRYETPVIMGIDEVNLAGGYR
CVITNLATNNVFDMLEHRTQEHLKPFFKDLPDADKVEWVCTDMWRPFKRSFAQYLPNAKLVIDKFHVVKMASEALEAERK
NYQAQLSKEDRIYVKKSIRWLTLKRPGNLTPAEQKALEVVKQAIPALAMAYDFKEAFFCIYDEPDKQSAQNAFEAWENSL
PPYGMEPFKKLVKTVHNHYDDIFAYWDAPFSITNGYTEGLNGLIKMSNRLGRGYSYEIIRAKTLYSKEARKVGSGIRAGR
GKVEYGPHIPTLLKQAEGGELD

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 48269; Mature: 48269

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLLNLPGIKPVDMRHEGKCLVIVAEPVTVEVPLCGECNIPMHRHGTRKNKFMDTPLYM
CCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
EPVRLEVQRPRFRCESCGKMSMPELSFLDDKRRATKRLVDVIRQQCLGTTFHALAEQTGV
CCHHEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC
AVNTVKNIARDLIEELSQTVRYETPVIMGIDEVNLAGGYRCVITNLATNNVFDMLEHRTQ
HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHH
EHLKPFFKDLPDADKVEWVCTDMWRPFKRSFAQYLPNAKLVIDKFHVVKMASEALEAERK
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHH
NYQAQLSKEDRIYVKKSIRWLTLKRPGNLTPAEQKALEVVKQAIPALAMAYDFKEAFFCI
HHHHHCCCCCCEEEEECEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
YDEPDKQSAQNAFEAWENSLPPYGMEPFKKLVKTVHNHYDDIFAYWDAPFSITNGYTEGL
ECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEEHCCCCCEECCCHHHHH
NGLIKMSNRLGRGYSYEIIRAKTLYSKEARKVGSGIRAGRGKVEYGPHIPTLLKQAEGGE
HHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHCCCCC
LD
CC
>Mature Secondary Structure
MLDLLNLPGIKPVDMRHEGKCLVIVAEPVTVEVPLCGECNIPMHRHGTRKNKFMDTPLYM
CCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
EPVRLEVQRPRFRCESCGKMSMPELSFLDDKRRATKRLVDVIRQQCLGTTFHALAEQTGV
CCHHEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC
AVNTVKNIARDLIEELSQTVRYETPVIMGIDEVNLAGGYRCVITNLATNNVFDMLEHRTQ
HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHH
EHLKPFFKDLPDADKVEWVCTDMWRPFKRSFAQYLPNAKLVIDKFHVVKMASEALEAERK
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHH
NYQAQLSKEDRIYVKKSIRWLTLKRPGNLTPAEQKALEVVKQAIPALAMAYDFKEAFFCI
HHHHHCCCCCCEEEEECEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
YDEPDKQSAQNAFEAWENSLPPYGMEPFKKLVKTVHNHYDDIFAYWDAPFSITNGYTEGL
ECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEEHCCCCCEECCCHHHHH
NGLIKMSNRLGRGYSYEIIRAKTLYSKEARKVGSGIRAGRGKVEYGPHIPTLLKQAEGGE
HHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHCCCCC
LD
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]