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The map label for this gene is ycbK [H]

Identifier: 152969510

GI number: 152969510

Start: 1077391

End: 1078047

Strand: Direct

Name: ycbK [H]

Synonym: KPN_00953

Alternate gene names: 152969510

Gene position: 1077391-1078047 (Clockwise)

Preceding gene: 152969509

Following gene: 152969511

Centisome position: 20.27

GC content: 50.68

Gene sequence:

>657_bases
TTGCCGGGCAACATCTCGGTCGTGGCGAGCGATAGCGAGCTGATCCTGGCATCGCGCAAAGCGGAAAAAGTATATAACGA
TTCATTGACTGTAGACCTGATTATCATGGACAAATTTGACGCTAATCGCCGCAGATTGCTGGCGTTGGGTGGCGCTGCGC
TGGGTGCTGCCGCCATTCTCCCTGCGCCGGCATTTGCCACCCTCTCGACCCCCCGTCCGCGTATTTTGACGCTGAATAAC
CTGCATACCGGTGAATCCCTCAGGGCGGAGTTTTTCGATGGCAGAGGCTATATTCAGGATGAATTAGCAAGACTTAACCA
TTTTTTCCGTGACTATCGCGCGAATAAAATTAAGTCCATCGATCCAAATCTGTTCGATCATCTTTATCGGTTGCAGGGAC
TACTTGGCACCAACAAACCTGTCCAGCTTATCTCTGGCTATCGTTCCCTCGATACCAACGATGAGCTTCGCGCACGAAGC
CGGGGTGTAGCGAAACACAGCTATCACACCAAGGGGCAGGCGATGGATTTCCATATTGAAGGTATTTCGTTAAGCAATAT
TCGCAAAGCGGCGTTATCTATGCGCGCAGGTGGTGTAGGATATTACCCACGTAGTAACTTTGTGCATATTGATACCGGTC
CCGTAAGGCACTGGTAA

Upstream 100 bases:

>100_bases
CGTTGGCAATAATGCCCGGTAAGGTGCCTTTCGTGCGCCAGAAGTGCATATACATATCATTCCGCTCAATGCGTAGCGCG
GTTAGCGCGAACGCTCTCCT

Downstream 100 bases:

>100_bases
CGAAAGGAGCGTCATGAACTATCGTATTATTCCGGTTACCGCGTTCGCGCAGAACTGTTCTCTTATCTGGTGCGGGCAAA
CCCGGCTGGCGGCGCTGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MPGNISVVASDSELILASRKAEKVYNDSLTVDLIIMDKFDANRRRLLALGGAALGAAAILPAPAFATLSTPRPRILTLNN
LHTGESLRAEFFDGRGYIQDELARLNHFFRDYRANKIKSIDPNLFDHLYRLQGLLGTNKPVQLISGYRSLDTNDELRARS
RGVAKHSYHTKGQAMDFHIEGISLSNIRKAALSMRAGGVGYYPRSNFVHIDTGPVRHW

Sequences:

>Translated_218_residues
MPGNISVVASDSELILASRKAEKVYNDSLTVDLIIMDKFDANRRRLLALGGAALGAAAILPAPAFATLSTPRPRILTLNN
LHTGESLRAEFFDGRGYIQDELARLNHFFRDYRANKIKSIDPNLFDHLYRLQGLLGTNKPVQLISGYRSLDTNDELRARS
RGVAKHSYHTKGQAMDFHIEGISLSNIRKAALSMRAGGVGYYPRSNFVHIDTGPVRHW
>Mature_217_residues
PGNISVVASDSELILASRKAEKVYNDSLTVDLIIMDKFDANRRRLLALGGAALGAAAILPAPAFATLSTPRPRILTLNNL
HTGESLRAEFFDGRGYIQDELARLNHFFRDYRANKIKSIDPNLFDHLYRLQGLLGTNKPVQLISGYRSLDTNDELRARSR
GVAKHSYHTKGQAMDFHIEGISLSNIRKAALSMRAGGVGYYPRSNFVHIDTGPVRHW

Specific function: Unknown

COG id: COG3108

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1666 [H]

Homologues:

Organism=Escherichia coli, GI1787157, Length=183, Percent_Identity=91.2568306010929, Blast_Score=347, Evalue=4e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010275
- InterPro:   IPR009045
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05951 Peptidase_M15_2 [H]

EC number: NA

Molecular weight: Translated: 24260; Mature: 24129

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGNISVVASDSELILASRKAEKVYNDSLTVDLIIMDKFDANRRRLLALGGAALGAAAIL
CCCCEEEEECCCEEEEECHHHHHHHCCCCEEEEEEEECCCCCCEEEEEECCHHHHHHHHC
PAPAFATLSTPRPRILTLNNLHTGESLRAEFFDGRGYIQDELARLNHFFRDYRANKIKSI
CCCCEEECCCCCCEEEEECCCCCCCHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC
DPNLFDHLYRLQGLLGTNKPVQLISGYRSLDTNDELRARSRGVAKHSYHTKGQAMDFHIE
CHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHCCCHHCCCCCCCCEEEEEEE
GISLSNIRKAALSMRAGGVGYYPRSNFVHIDTGPVRHW
CCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCC
>Mature Secondary Structure 
PGNISVVASDSELILASRKAEKVYNDSLTVDLIIMDKFDANRRRLLALGGAALGAAAIL
CCCEEEEECCCEEEEECHHHHHHHCCCCEEEEEEEECCCCCCEEEEEECCHHHHHHHHC
PAPAFATLSTPRPRILTLNNLHTGESLRAEFFDGRGYIQDELARLNHFFRDYRANKIKSI
CCCCEEECCCCCCEEEEECCCCCCCHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC
DPNLFDHLYRLQGLLGTNKPVQLISGYRSLDTNDELRARSRGVAKHSYHTKGQAMDFHIE
CHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHCCCHHCCCCCCCCEEEEEEE
GISLSNIRKAALSMRAGGVGYYPRSNFVHIDTGPVRHW
CCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]