| Definition | Klebsiella pneumoniae subsp. pneumoniae MGH 78578 chromosome, complete genome. |
|---|---|
| Accession | NC_009648 |
| Length | 5,315,120 |
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The map label for this gene is ycaI [H]
Identifier: 152969497
GI number: 152969497
Start: 1058742
End: 1061006
Strand: Direct
Name: ycaI [H]
Synonym: KPN_00940
Alternate gene names: 152969497
Gene position: 1058742-1061006 (Clockwise)
Preceding gene: 152969496
Following gene: 152969498
Centisome position: 19.92
GC content: 63.05
Gene sequence:
>2265_bases ATGCGTCTACCATGGCTTGCCGGATGCGCCATCATTGCAATGCTGCCGCTTCTCTGGCTACCCGTCTTGCCGGGCCCGTG CAGTCTGGCGGGCGCGAGCGCACTGGCGCTGGCGCTGATTCGTCTGCATGGAAGGGCCGTCGCCGGAGTGGCGATGACGC TTCTGCTGGTGGTCTGGGGAGTATTGAGCGCGCATCAGGCGCTGTGGCCGACCCGGCACCTTACCGGCGCCATCCGGCAA GCGGAAGTGATCCTTAGCGAGACGGATGGCCAGACCTTGCACCGTGGACAGATGGTGCGCCTGCGGGGCCGCTATCTGTT TCCCCCGGTAGGCGTAACGCTGTACGGGGAACTTGCACCTGCGCCAGCCTGTGCGGGTCAACACTGGCTGATGACGCTGC GCCTGCGCCCGGTGCACGGGCAGCTCAATGACGGGGGCTTCGACAGCCAGCGCTATGCGCTGGCGCAGCACCGACCGCTG AGCGGAGGGATCGTCGCCGCTTCCGCGCTGGATGCCCGCTGCAGTCTGCGCGCCCGCTATCTGACGTCGCTGACCCGGCG ACTGCAGACTTATCCCTGGCGCGCGGTGATGTTGGGATTAGGAATGGGGGAGCGGCTGTCTCTGCCGACGGAGATAAAGG TCCTGATGCAGAACACGGGCACTTCCCATCTGATGGCTATCTCGGGTCTGCATATCGCTCTCGCGGCTTCTCTTATCATG CTGTTGCTGCGCGGCGTGCAGTATATTCTCCCGGGCCGCTGGATTGGCTGGCGGTTGCCCCTTGTCGCCGGGCTGGCGGG CGCCGTCGGCTATGCCTGGCTGACCGGTATGCAGCCGCCGGCCCTGCGCACTTGCTTAGGGCTTGCGGTCTGTTGTGCTT TACGTTTGTCGGGTCAACGCTGGACGGCGTGGCAGGTGTGGCTCTGCTGTCTGGGAGCGATACTGGTTGCCGACCCGCTG GCGGTGCTGTCGCAAAGCCTGTGGCTATCTGCCTTCGCCGTGGCGGGGCTGATCTTCTGGTTCCAGTGGCTCCCGTTGCC TGCCGGCCGCTGGCGCTGGCCGTGGAAGACCATAATTGCTCTTGTTCATTTGCAGGCTGGCGTGACGCTGCTGCTGCTGC CGCTGCAGTTGTTGCTATTCCATGGAGTCAGCCTGACGTCGATGGCGGCTAATTTGCTGGCGGTACCGTTAGTCACCCTG TTGGCGGTGCCGCTTATTCTGACCGCGATGCTGGTGCATCTCTCGGGGCCGGATATAGTGGAGTCGCTACTCTGGCTGGC GGCCGATCGCGTGCTGGCGCTACTGTTTTGGGGATTACGACGTTTACCGGACGGCTGGTTGACGCTGGATGCTCGCTGGC TGTGGATCAGTATCCTGCCGTGGCTGTTGGTGATGGGCTGGCGTTTTCAGAGCTGGCGGCATTCACCGGCGCTGTGTCTC AGCGTGCTGTTTTTACTGACGCGGCCATTCAGCCGACAACCGCCTGCGGACGAATGGCGGGTGACGATGCTGGATGTCGG ACAGGGGCTGGCGATGGTGATCGAGCGTCACGGTAAGGCATTGCTTTACGATACCGGGCCGGCTTGGCCGCAGGGTGATA GCGGTCAACAGGTGATTATCCCGTGGCTGCGCTGGCACCATCTGCAGTTGCAAGGGATTATGCTGAGCCATGAACATCTG GATCATCGCGGCGGCCTTGATTCAGTGCTGCAGGCATGGCCGCAGGCGTGGGTGCGCAGCCCGTTAGGCTGGGCGCATCA TCTGCCGTGTCATCGCGGTGAGCGCTGGCAATGGCAGGGACTCAACTTCCAGGCCCTGTGGCCGCTACCGGGCAGCACGG CAAAGGGTAACAATCATTCCTGTGTGGTGCGGATCGATGATGGTCGCTCCAGCATCCTGCTCACCGGCGATATAGAACGT CAGGCGGAGCAGGCGATGATCAGCCGTTACTGGCGGCATCTGACGTCTACACTTATTCAGGTTCCCCACCACGGCAGCAA TACCTCCTCCAGCGCGCTGCTGGTCCGCCGGGTGGATGGCGCGGCCGCGCTGGCCTCCGCTTCGCGCTACAATGCGTGGC GGATGCCCTCGTACAAGGTGGTTCAGCGCTACCGCCAGCGGGGTTATCGCTGGTTCGCCACGCCGCAGCAGGGGCAGATA ACGGTGGTTTTTTCCGCAGAAGGGTGGCAAATCCATAGCTTACGGGATCAAGTTTTACCGCGTTGGTATCATCAGTGGTT TGGCGCGCCCGCCGATAACGGGTAG
Upstream 100 bases:
>100_bases AAGCGAGGCGATTGTCTGGAATGCGCCGCGCAAACCTGAATTCGCCGCCAGGACGCCAGCACCGCTTTGCGTAACACTGC CCACTCACAGGGAGGTGTTT
Downstream 100 bases:
>100_bases AATATGCGGCTATTTCAACACAAGCTGGTTTATTGAATGCAGAACGATAAAGATCTCTCCACGTGGCAGACCTTCCGCCG ACTTTGGCCGATTATCGCGC
Product: recombination protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 754; Mature: 754
Protein sequence:
>754_residues MRLPWLAGCAIIAMLPLLWLPVLPGPCSLAGASALALALIRLHGRAVAGVAMTLLLVVWGVLSAHQALWPTRHLTGAIRQ AEVILSETDGQTLHRGQMVRLRGRYLFPPVGVTLYGELAPAPACAGQHWLMTLRLRPVHGQLNDGGFDSQRYALAQHRPL SGGIVAASALDARCSLRARYLTSLTRRLQTYPWRAVMLGLGMGERLSLPTEIKVLMQNTGTSHLMAISGLHIALAASLIM LLLRGVQYILPGRWIGWRLPLVAGLAGAVGYAWLTGMQPPALRTCLGLAVCCALRLSGQRWTAWQVWLCCLGAILVADPL AVLSQSLWLSAFAVAGLIFWFQWLPLPAGRWRWPWKTIIALVHLQAGVTLLLLPLQLLLFHGVSLTSMAANLLAVPLVTL LAVPLILTAMLVHLSGPDIVESLLWLAADRVLALLFWGLRRLPDGWLTLDARWLWISILPWLLVMGWRFQSWRHSPALCL SVLFLLTRPFSRQPPADEWRVTMLDVGQGLAMVIERHGKALLYDTGPAWPQGDSGQQVIIPWLRWHHLQLQGIMLSHEHL DHRGGLDSVLQAWPQAWVRSPLGWAHHLPCHRGERWQWQGLNFQALWPLPGSTAKGNNHSCVVRIDDGRSSILLTGDIER QAEQAMISRYWRHLTSTLIQVPHHGSNTSSSALLVRRVDGAAALASASRYNAWRMPSYKVVQRYRQRGYRWFATPQQGQI TVVFSAEGWQIHSLRDQVLPRWYHQWFGAPADNG
Sequences:
>Translated_754_residues MRLPWLAGCAIIAMLPLLWLPVLPGPCSLAGASALALALIRLHGRAVAGVAMTLLLVVWGVLSAHQALWPTRHLTGAIRQ AEVILSETDGQTLHRGQMVRLRGRYLFPPVGVTLYGELAPAPACAGQHWLMTLRLRPVHGQLNDGGFDSQRYALAQHRPL SGGIVAASALDARCSLRARYLTSLTRRLQTYPWRAVMLGLGMGERLSLPTEIKVLMQNTGTSHLMAISGLHIALAASLIM LLLRGVQYILPGRWIGWRLPLVAGLAGAVGYAWLTGMQPPALRTCLGLAVCCALRLSGQRWTAWQVWLCCLGAILVADPL AVLSQSLWLSAFAVAGLIFWFQWLPLPAGRWRWPWKTIIALVHLQAGVTLLLLPLQLLLFHGVSLTSMAANLLAVPLVTL LAVPLILTAMLVHLSGPDIVESLLWLAADRVLALLFWGLRRLPDGWLTLDARWLWISILPWLLVMGWRFQSWRHSPALCL SVLFLLTRPFSRQPPADEWRVTMLDVGQGLAMVIERHGKALLYDTGPAWPQGDSGQQVIIPWLRWHHLQLQGIMLSHEHL DHRGGLDSVLQAWPQAWVRSPLGWAHHLPCHRGERWQWQGLNFQALWPLPGSTAKGNNHSCVVRIDDGRSSILLTGDIER QAEQAMISRYWRHLTSTLIQVPHHGSNTSSSALLVRRVDGAAALASASRYNAWRMPSYKVVQRYRQRGYRWFATPQQGQI TVVFSAEGWQIHSLRDQVLPRWYHQWFGAPADNG >Mature_754_residues MRLPWLAGCAIIAMLPLLWLPVLPGPCSLAGASALALALIRLHGRAVAGVAMTLLLVVWGVLSAHQALWPTRHLTGAIRQ AEVILSETDGQTLHRGQMVRLRGRYLFPPVGVTLYGELAPAPACAGQHWLMTLRLRPVHGQLNDGGFDSQRYALAQHRPL SGGIVAASALDARCSLRARYLTSLTRRLQTYPWRAVMLGLGMGERLSLPTEIKVLMQNTGTSHLMAISGLHIALAASLIM LLLRGVQYILPGRWIGWRLPLVAGLAGAVGYAWLTGMQPPALRTCLGLAVCCALRLSGQRWTAWQVWLCCLGAILVADPL AVLSQSLWLSAFAVAGLIFWFQWLPLPAGRWRWPWKTIIALVHLQAGVTLLLLPLQLLLFHGVSLTSMAANLLAVPLVTL LAVPLILTAMLVHLSGPDIVESLLWLAADRVLALLFWGLRRLPDGWLTLDARWLWISILPWLLVMGWRFQSWRHSPALCL SVLFLLTRPFSRQPPADEWRVTMLDVGQGLAMVIERHGKALLYDTGPAWPQGDSGQQVIIPWLRWHHLQLQGIMLSHEHL DHRGGLDSVLQAWPQAWVRSPLGWAHHLPCHRGERWQWQGLNFQALWPLPGSTAKGNNHSCVVRIDDGRSSILLTGDIER QAEQAMISRYWRHLTSTLIQVPHHGSNTSSSALLVRRVDGAAALASASRYNAWRMPSYKVVQRYRQRGYRWFATPQQGQI TVVFSAEGWQIHSLRDQVLPRWYHQWFGAPADNG
Specific function: Unknown
COG id: COG0658
COG function: function code R; Predicted membrane metal-binding protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis ComEC, N.gonorrhoeae ComA, and H.influenzae Rec2 [H]
Homologues:
Organism=Escherichia coli, GI87081801, Length=756, Percent_Identity=60.8465608465608, Blast_Score=932, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR004477 - InterPro: IPR004797 [H]
Pfam domain/function: PF03772 Competence; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 84010; Mature: 84010
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLPWLAGCAIIAMLPLLWLPVLPGPCSLAGASALALALIRLHGRAVAGVAMTLLLVVWG CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH VLSAHQALWPTRHLTGAIRQAEVILSETDGQTLHRGQMVRLRGRYLFPPVGVTLYGELAP HHHHHHHHCCHHHHHHHHHHHHHEEECCCCCHHHCCCEEEECCCEECCCCCEEEEECCCC APACAGQHWLMTLRLRPVHGQLNDGGFDSQRYALAQHRPLSGGIVAASALDARCSLRARY CCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHH LTSLTRRLQTYPWRAVMLGLGMGERLSLPTEIKVLMQNTGTSHLMAISGLHIALAASLIM HHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LLLRGVQYILPGRWIGWRLPLVAGLAGAVGYAWLTGMQPPALRTCLGLAVCCALRLSGQR HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC WTAWQVWLCCLGAILVADPLAVLSQSLWLSAFAVAGLIFWFQWLPLPAGRWRWPWKTIIA CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH LVHLQAGVTLLLLPLQLLLFHGVSLTSMAANLLAVPLVTLLAVPLILTAMLVHLSGPDIV HHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ESLLWLAADRVLALLFWGLRRLPDGWLTLDARWLWISILPWLLVMGWRFQSWRHSPALCL HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCHHCCCCCHHHHH SVLFLLTRPFSRQPPADEWRVTMLDVGQGLAMVIERHGKALLYDTGPAWPQGDSGQQVII HHHHHHCCCCCCCCCCCHHEEEEEECCCCHHHHHHHCCCEEEEECCCCCCCCCCCCEEEE PWLRWHHLQLQGIMLSHEHLDHRGGLDSVLQAWPQAWVRSPLGWAHHLPCHRGERWQWQG EHHHHHEEEEEEEEECHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEECC LNFQALWPLPGSTAKGNNHSCVVRIDDGRSSILLTGDIERQAEQAMISRYWRHLTSTLIQ CCEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH VPHHGSNTSSSALLVRRVDGAAALASASRYNAWRMPSYKVVQRYRQRGYRWFATPQQGQI CCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEECCCCCCEE TVVFSAEGWQIHSLRDQVLPRWYHQWFGAPADNG EEEEECCCCEEHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRLPWLAGCAIIAMLPLLWLPVLPGPCSLAGASALALALIRLHGRAVAGVAMTLLLVVWG CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH VLSAHQALWPTRHLTGAIRQAEVILSETDGQTLHRGQMVRLRGRYLFPPVGVTLYGELAP HHHHHHHHCCHHHHHHHHHHHHHEEECCCCCHHHCCCEEEECCCEECCCCCEEEEECCCC APACAGQHWLMTLRLRPVHGQLNDGGFDSQRYALAQHRPLSGGIVAASALDARCSLRARY CCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHH LTSLTRRLQTYPWRAVMLGLGMGERLSLPTEIKVLMQNTGTSHLMAISGLHIALAASLIM HHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LLLRGVQYILPGRWIGWRLPLVAGLAGAVGYAWLTGMQPPALRTCLGLAVCCALRLSGQR HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC WTAWQVWLCCLGAILVADPLAVLSQSLWLSAFAVAGLIFWFQWLPLPAGRWRWPWKTIIA CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH LVHLQAGVTLLLLPLQLLLFHGVSLTSMAANLLAVPLVTLLAVPLILTAMLVHLSGPDIV HHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ESLLWLAADRVLALLFWGLRRLPDGWLTLDARWLWISILPWLLVMGWRFQSWRHSPALCL HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCHHCCCCCHHHHH SVLFLLTRPFSRQPPADEWRVTMLDVGQGLAMVIERHGKALLYDTGPAWPQGDSGQQVII HHHHHHCCCCCCCCCCCHHEEEEEECCCCHHHHHHHCCCEEEEECCCCCCCCCCCCEEEE PWLRWHHLQLQGIMLSHEHLDHRGGLDSVLQAWPQAWVRSPLGWAHHLPCHRGERWQWQG EHHHHHEEEEEEEEECHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEECC LNFQALWPLPGSTAKGNNHSCVVRIDDGRSSILLTGDIERQAEQAMISRYWRHLTSTLIQ CCEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH VPHHGSNTSSSALLVRRVDGAAALASASRYNAWRMPSYKVVQRYRQRGYRWFATPQQGQI CCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEECCCCCCEE TVVFSAEGWQIHSLRDQVLPRWYHQWFGAPADNG EEEEECCCCEEHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 8094880 [H]