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The map label for this gene is ybiT [H]

Identifier: 152969408

GI number: 152969408

Start: 948146

End: 949714

Strand: Direct

Name: ybiT [H]

Synonym: KPN_00851

Alternate gene names: 152969408

Gene position: 948146-949714 (Clockwise)

Preceding gene: 152969405

Following gene: 152969411

Centisome position: 17.84

GC content: 57.04

Gene sequence:

>1569_bases
ATGCAGTTTGGCAGTAAGCCGCTGTTCGAAAATATCTCCGTTAAATTTGGCGGCGGCAACCGTTATGGTCTGATCGGCGC
CAACGGCAGCGGTAAATCGACCTTTATGAAGATCCTCGGCGGCGATCTCGAACCGACGCTGGGCAACGTTTCTCTCGACC
CGAACGAGCGCATCGGTAAGCTGCGTCAGGATCAGTTCGCCTTTGAAGCGTTCACCGTGCTGGATACGGTCATCATGGGC
CACGGCGAGCTGTGGGAAGTGAAGCAGGAGCGCGATCGTATCTACGCCCTCGCTGAGATGAGCGAAGAAGATGGCTACAA
AGTGGCCGACCTGGAAGTCAAATATGGCGAAATGGACGGCTACTCGGCGGAAGCGCGCGCCGGCGAACTGCTGCTCGGCG
TCGGCATTCCGGTTGAACAGCATTATGGCCCGATGAGCGAAGTCGCGCCGGGCTGGAAGCTGCGCGTCCTGCTGGCGCAG
GCGCTGTTTTCCAATCCGGATATCCTGCTGCTCGATGAACCGACCAACAACCTGGACATCGACACCATTCGCTGGCTGGA
GCAGACGCTGAACGATCGCGACAGCACTATGATTATCATTTCGCACGACCGTCACTTCCTGAACATGGTCTGCACCCACA
TGGCGGATCTCGACTACGGCGAGCTGCGCGTGTATCCGGGCAACTACGACGAATACATGACCGCGGCCACCCAGGCGCGT
GAGCGTCTGCTGGCGGACAACGCCAAGAAAAAAGCGCAGATTGCGGACCTGCAGTCCTTCGTTAGCCGCTTCAGCGCCAA
CGCCTCTAAATCGCGTCAGGCCACCTCGCGCGCGCGCCAGATTGACAAAATCAAGCTGGAAGAGGTTAAAGCCTCCAGCC
GTCAGAACCCATTTATCCGCTTCGAGCAGGATAAGAAACTGTTCCGTAACGCGCTGGAAGTGGAAGCCCTTACCAAAGGC
TTTGATGAAGGTCCGCTGTTCAAAAACGTCAACCTGCTGCTGGAAGTGGGCGAAAAGATCGCCATTCTGGGCGCCAACGG
CGTGGGTAAATCCACCATGCTGAAAACCCTGGTAGGCGAACTGCAGCCGGACAACGGCAGCGTGAAATGGTCTGAAAACG
CGCAAATCGGCTACTACGCGCAGGACCATGAGTACGAGTTCGAAAACGACCTGACGGTCTTCGAATGGATGAGCCAGTGG
AAGCAGGAAGGCGACGACGAGCAGGCAGTACGCAGCATCCTCGGCCGTCTGCTGTTTAGCCAGGACGATATCAAAAAGCC
GGCGAAGGTACTTTCCGGTGGCGAGAAAGGGCGCATGCTGTTCGGTAAGCTGATGATGCAGAAGCCAAACATCCTGGTGA
TGGACGAACCGACCAACCACCTGGATATGGAGTCGATTGAATCGCTGAACATGGCGCTGGAGATGTATCAGGGCACCCTG
ATCTTTGTCTCCCACGACCGTGAGTTTGTCAGCTCGCTGGCGACCCGCGTCCTGGAGATCACTCCGGACCGCGTGATCGA
CTTCAGCGGCAACTACGAAGACTACCTGCGCAGCAAAGGTATCGAGTAA

Upstream 100 bases:

>100_bases
CCGTGAAAAGTGTGTCATTTGCTGGCATAATGTCTGCTGTATCACACCCCTCATACTCTTTTTTCAGGATATCCCCGTGC
TAGTATCCAGCAACGTTACC

Downstream 100 bases:

>100_bases
TCCCTGTCCGTTACCCGGGTAGCGGCTACGCCTTACCCGGGCGACACGCGGTGCCGTTTTTTTGTCGGGTGGCGGCTAAC
GCCTTACCCGACCTACGGTT

Product: putative ATP-binding component of a transport system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 522; Mature: 522

Protein sequence:

>522_residues
MQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGKLRQDQFAFEAFTVLDTVIMG
HGELWEVKQERDRIYALAEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQ
ALFSNPDILLLDEPTNNLDIDTIRWLEQTLNDRDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEYMTAATQAR
ERLLADNAKKKAQIADLQSFVSRFSANASKSRQATSRARQIDKIKLEEVKASSRQNPFIRFEQDKKLFRNALEVEALTKG
FDEGPLFKNVNLLLEVGEKIAILGANGVGKSTMLKTLVGELQPDNGSVKWSENAQIGYYAQDHEYEFENDLTVFEWMSQW
KQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILVMDEPTNHLDMESIESLNMALEMYQGTL
IFVSHDREFVSSLATRVLEITPDRVIDFSGNYEDYLRSKGIE

Sequences:

>Translated_522_residues
MQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGKLRQDQFAFEAFTVLDTVIMG
HGELWEVKQERDRIYALAEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQ
ALFSNPDILLLDEPTNNLDIDTIRWLEQTLNDRDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEYMTAATQAR
ERLLADNAKKKAQIADLQSFVSRFSANASKSRQATSRARQIDKIKLEEVKASSRQNPFIRFEQDKKLFRNALEVEALTKG
FDEGPLFKNVNLLLEVGEKIAILGANGVGKSTMLKTLVGELQPDNGSVKWSENAQIGYYAQDHEYEFENDLTVFEWMSQW
KQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILVMDEPTNHLDMESIESLNMALEMYQGTL
IFVSHDREFVSSLATRVLEITPDRVIDFSGNYEDYLRSKGIE
>Mature_522_residues
MQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGKLRQDQFAFEAFTVLDTVIMG
HGELWEVKQERDRIYALAEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQ
ALFSNPDILLLDEPTNNLDIDTIRWLEQTLNDRDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEYMTAATQAR
ERLLADNAKKKAQIADLQSFVSRFSANASKSRQATSRARQIDKIKLEEVKASSRQNPFIRFEQDKKLFRNALEVEALTKG
FDEGPLFKNVNLLLEVGEKIAILGANGVGKSTMLKTLVGELQPDNGSVKWSENAQIGYYAQDHEYEFENDLTVFEWMSQW
KQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILVMDEPTNHLDMESIESLNMALEMYQGTL
IFVSHDREFVSSLATRVLEITPDRVIDFSGNYEDYLRSKGIE

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=523, Percent_Identity=32.3135755258126, Blast_Score=265, Evalue=7e-71,
Organism=Homo sapiens, GI10947137, Length=534, Percent_Identity=30.7116104868914, Blast_Score=247, Evalue=2e-65,
Organism=Homo sapiens, GI27881506, Length=534, Percent_Identity=30.7116104868914, Blast_Score=247, Evalue=2e-65,
Organism=Homo sapiens, GI10947135, Length=529, Percent_Identity=30.4347826086957, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI69354671, Length=529, Percent_Identity=30.4347826086957, Blast_Score=216, Evalue=4e-56,
Organism=Homo sapiens, GI27477115, Length=148, Percent_Identity=31.7567567567568, Blast_Score=67, Evalue=6e-11,
Organism=Escherichia coli, GI1787041, Length=522, Percent_Identity=95.5938697318008, Blast_Score=1039, Evalue=0.0,
Organism=Escherichia coli, GI1789751, Length=518, Percent_Identity=33.2046332046332, Blast_Score=290, Evalue=1e-79,
Organism=Escherichia coli, GI1787182, Length=503, Percent_Identity=32.8031809145129, Blast_Score=244, Evalue=8e-66,
Organism=Escherichia coli, GI2367384, Length=518, Percent_Identity=29.7297297297297, Blast_Score=228, Evalue=7e-61,
Organism=Escherichia coli, GI1786975, Length=520, Percent_Identity=22.5, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI1788165, Length=207, Percent_Identity=29.4685990338164, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87081791, Length=212, Percent_Identity=28.3018867924528, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1788225, Length=227, Percent_Identity=24.6696035242291, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1788761, Length=213, Percent_Identity=24.8826291079812, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1787029, Length=237, Percent_Identity=26.5822784810127, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1789891, Length=206, Percent_Identity=24.2718446601942, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI87082064, Length=205, Percent_Identity=26.3414634146341, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1787758, Length=182, Percent_Identity=26.3736263736264, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1789672, Length=210, Percent_Identity=26.1904761904762, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1790467, Length=223, Percent_Identity=26.457399103139, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1788897, Length=196, Percent_Identity=27.5510204081633, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI87081709, Length=303, Percent_Identity=22.4422442244224, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787164, Length=216, Percent_Identity=25, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87081834, Length=226, Percent_Identity=28.3185840707965, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1786703, Length=208, Percent_Identity=28.8461538461538, Blast_Score=63, Evalue=5e-11,
Organism=Escherichia coli, GI1786698, Length=198, Percent_Identity=26.2626262626263, Blast_Score=63, Evalue=6e-11,
Organism=Escherichia coli, GI87082267, Length=208, Percent_Identity=26.9230769230769, Blast_Score=62, Evalue=7e-11,
Organism=Escherichia coli, GI1787370, Length=211, Percent_Identity=24.1706161137441, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=537, Percent_Identity=30.5400372439479, Blast_Score=258, Evalue=7e-69,
Organism=Caenorhabditis elegans, GI17553372, Length=525, Percent_Identity=31.2380952380952, Blast_Score=243, Evalue=1e-64,
Organism=Caenorhabditis elegans, GI17559834, Length=531, Percent_Identity=27.8719397363465, Blast_Score=226, Evalue=3e-59,
Organism=Caenorhabditis elegans, GI193202349, Length=220, Percent_Identity=26.3636363636364, Blast_Score=68, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=523, Percent_Identity=30.7839388145315, Blast_Score=252, Evalue=1e-67,
Organism=Saccharomyces cerevisiae, GI6321121, Length=533, Percent_Identity=31.7073170731707, Blast_Score=248, Evalue=2e-66,
Organism=Saccharomyces cerevisiae, GI6325030, Length=417, Percent_Identity=27.5779376498801, Blast_Score=130, Evalue=7e-31,
Organism=Saccharomyces cerevisiae, GI6323278, Length=414, Percent_Identity=25.8454106280193, Blast_Score=129, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6324314, Length=413, Percent_Identity=26.8765133171913, Blast_Score=126, Evalue=7e-30,
Organism=Drosophila melanogaster, GI24666836, Length=526, Percent_Identity=32.319391634981, Blast_Score=261, Evalue=6e-70,
Organism=Drosophila melanogaster, GI24642252, Length=530, Percent_Identity=31.1320754716981, Blast_Score=260, Evalue=1e-69,
Organism=Drosophila melanogaster, GI18859989, Length=530, Percent_Identity=31.1320754716981, Blast_Score=260, Evalue=1e-69,
Organism=Drosophila melanogaster, GI24641342, Length=528, Percent_Identity=30.1136363636364, Blast_Score=239, Evalue=4e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 58852; Mature: 58852

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGK
CCCCCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
LRQDQFAFEAFTVLDTVIMGHGELWEVKQERDRIYALAEMSEEDGYKVADLEVKYGEMDG
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCCCCCCEEEEEEEEECCCCC
YSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDI
CCCCCCCCCEEEECCCCHHHHCCCHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCH
DTIRWLEQTLNDRDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEYMTAATQAR
HHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHH
ERLLADNAKKKAQIADLQSFVSRFSANASKSRQATSRARQIDKIKLEEVKASSRQNPFIR
HHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
FEQDKKLFRNALEVEALTKGFDEGPLFKNVNLLLEVGEKIAILGANGVGKSTMLKTLVGE
ECHHHHHHHHHHHHHHHHCCCCCCCCHHCHHHHEECCCEEEEEECCCCCHHHHHHHHHHH
LQPDNGSVKWSENAQIGYYAQDHEYEFENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFS
CCCCCCCEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
QDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILVMDEPTNHLDMESIESLNMALEMYQGTL
HHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEE
IFVSHDREFVSSLATRVLEITPDRVIDFSGNYEDYLRSKGIE
EEEECCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCC
>Mature Secondary Structure
MQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGK
CCCCCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
LRQDQFAFEAFTVLDTVIMGHGELWEVKQERDRIYALAEMSEEDGYKVADLEVKYGEMDG
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCCCCCCEEEEEEEEECCCCC
YSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDI
CCCCCCCCCEEEECCCCHHHHCCCHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCH
DTIRWLEQTLNDRDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEYMTAATQAR
HHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHH
ERLLADNAKKKAQIADLQSFVSRFSANASKSRQATSRARQIDKIKLEEVKASSRQNPFIR
HHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
FEQDKKLFRNALEVEALTKGFDEGPLFKNVNLLLEVGEKIAILGANGVGKSTMLKTLVGE
ECHHHHHHHHHHHHHHHHCCCCCCCCHHCHHHHEECCCEEEEEECCCCCHHHHHHHHHHH
LQPDNGSVKWSENAQIGYYAQDHEYEFENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFS
CCCCCCCEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
QDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILVMDEPTNHLDMESIESLNMALEMYQGTL
HHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEE
IFVSHDREFVSSLATRVLEITPDRVIDFSGNYEDYLRSKGIE
EEEECCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]