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The map label for this gene is ydiC [H]

Identifier: 151222170

GI number: 151222170

Start: 2167837

End: 2168526

Strand: Reverse

Name: ydiC [H]

Synonym: NWMN_1958

Alternate gene names: 151222170

Gene position: 2168526-2167837 (Counterclockwise)

Preceding gene: 151222171

Following gene: 151222169

Centisome position: 75.32

GC content: 35.36

Gene sequence:

>690_bases
ATGAACAAATTAAGGAGGCAATTATCCATGAATTCGCTGCTCATTGATACATCGAATCAACCATTATCAGTAGCATTGAT
GCAAAACGATGAAGTTTTAGCTGAAATAACTACGGATTCTAAACAAAATCATTCAGTGCAATTAATGCCTGCGATTAGTC
AGCTATTTGAGCAGAGCAAAATAGCTAAACAGCAATTAGATGCGATTATTGTTGCTGAAGGTCCTGGTTCATATACTGGC
TTACGTATCGGTGTTACTGTTGCTAAAACATTAGCGTATGCGTTAGATGTTAAATTATATGGTGTTTCATCATTAAAGGC
ATTGGCAGCAACAATCGATCATACTGATAAATTATTGGTTCCTGTGTTTGATGCAAGACGACAAGCAGTTTATACAGGCA
TGTTCCAGTGGCAAAATGGTCAATTAGTGACTATTTTAGAAGATCAATATATGTCGATAGAGGCATTGCGAGCTTTTTTA
GAAGATTTAAACCAACCATTTATTTATATTGGGAAAGATACTGTAAAATTACAAGATGAATTACAAGGTGAAGTGATTGC
GCAGCTACCAAATGCATCAGTCATGTATCAATTGCTAGATAAACCTTCAGACGTACATACATTTACTCCTAAATACCATA
AATTAGCTGAGGCGGAACGAAATTGGATCAACAGTCAAAAGAACAATTAA

Upstream 100 bases:

>100_bases
TTTATAAAAGATTTACTTCCAGCGACGCATTTATCTATTAACATTTCAACAATATCTGAAAATACAAGACAAATTGAGTT
GTTCGCGCAAGGAGAACATT

Downstream 100 bases:

>100_bases
ACATTAGAGAGATGACTAAAGAAGATGTGCCACAAGTCTTTGATCTTGAGCGTCGGAGTTTCAATGACAGTTCTTGGACA
ATTGACGCATTTTATCATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MNKLRRQLSMNSLLIDTSNQPLSVALMQNDEVLAEITTDSKQNHSVQLMPAISQLFEQSKIAKQQLDAIIVAEGPGSYTG
LRIGVTVAKTLAYALDVKLYGVSSLKALAATIDHTDKLLVPVFDARRQAVYTGMFQWQNGQLVTILEDQYMSIEALRAFL
EDLNQPFIYIGKDTVKLQDELQGEVIAQLPNASVMYQLLDKPSDVHTFTPKYHKLAEAERNWINSQKNN

Sequences:

>Translated_229_residues
MNKLRRQLSMNSLLIDTSNQPLSVALMQNDEVLAEITTDSKQNHSVQLMPAISQLFEQSKIAKQQLDAIIVAEGPGSYTG
LRIGVTVAKTLAYALDVKLYGVSSLKALAATIDHTDKLLVPVFDARRQAVYTGMFQWQNGQLVTILEDQYMSIEALRAFL
EDLNQPFIYIGKDTVKLQDELQGEVIAQLPNASVMYQLLDKPSDVHTFTPKYHKLAEAERNWINSQKNN
>Mature_229_residues
MNKLRRQLSMNSLLIDTSNQPLSVALMQNDEVLAEITTDSKQNHSVQLMPAISQLFEQSKIAKQQLDAIIVAEGPGSYTG
LRIGVTVAKTLAYALDVKLYGVSSLKALAATIDHTDKLLVPVFDARRQAVYTGMFQWQNGQLVTILEDQYMSIEALRAFL
EDLNQPFIYIGKDTVKLQDELQGEVIAQLPNASVMYQLLDKPSDVHTFTPKYHKLAEAERNWINSQKNN

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=129, Percent_Identity=30.2325581395349, Blast_Score=67, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 25682; Mature: 25682

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLRRQLSMNSLLIDTSNQPLSVALMQNDEVLAEITTDSKQNHSVQLMPAISQLFEQSK
CCHHHHHHCCCEEEEECCCCCEEEEEEECCCEEEEEECCCCCCCCEEEHHHHHHHHHHHH
IAKQQLDAIIVAEGPGSYTGLRIGVTVAKTLAYALDVKLYGVSSLKALAATIDHTDKLLV
HHHHHCCEEEEECCCCCCCEEEEHHHHHHHHHHHHHEEEECHHHHHHHHHHHCCCCCEEE
PVFDARRQAVYTGMFQWQNGQLVTILEDQYMSIEALRAFLEDLNQPFIYIGKDTVKLQDE
EHHHHHHHHHHEEEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCEEEEHHH
LQGEVIAQLPNASVMYQLLDKPSDVHTFTPKYHKLAEAERNWINSQKNN
HCCHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNKLRRQLSMNSLLIDTSNQPLSVALMQNDEVLAEITTDSKQNHSVQLMPAISQLFEQSK
CCHHHHHHCCCEEEEECCCCCEEEEEEECCCEEEEEECCCCCCCCEEEHHHHHHHHHHHH
IAKQQLDAIIVAEGPGSYTGLRIGVTVAKTLAYALDVKLYGVSSLKALAATIDHTDKLLV
HHHHHCCEEEEECCCCCCCEEEEHHHHHHHHHHHHHEEEECHHHHHHHHHHHCCCCCEEE
PVFDARRQAVYTGMFQWQNGQLVTILEDQYMSIEALRAFLEDLNQPFIYIGKDTVKLQDE
EHHHHHHHHHHEEEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCEEEEHHH
LQGEVIAQLPNASVMYQLLDKPSDVHTFTPKYHKLAEAERNWINSQKNN
HCCHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]