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The map label for this gene is rpl15p

Identifier: 150401828

GI number: 150401828

Start: 1460667

End: 1461098

Strand: Direct

Name: rpl15p

Synonym: Maeo_1406

Alternate gene names: 150401828

Gene position: 1460667-1461098 (Clockwise)

Preceding gene: 150401827

Following gene: 150401829

Centisome position: 93.07

GC content: 31.94

Gene sequence:

>432_bases
ATGATAAGAAAAAGTAAAAAAATAACAAAATTAAGAGGAAGTAGAACCTGTGGTTATGGAGCTGCTAAAAAACATAGAGG
GGCAGGCCATAAAGGAGGTAAAGGTTTAGCTGGTGTTACAAAACATAGATGGATTCACACAGTTAAATACATGCCAGACC
ACATAGGTAAATATGGTTTCAAAAGACATTCCAGTTTAATAAAAGAGTTAAAAGTAATTAACTTGGGGCAGTTGGATGAA
ATCGTATCTAAAAACAAAGAATCCTTTGAAATAGTAGATGGAAAAATTGTAATTGACATTACCACATTAGACTATGAAAA
GGTTTTAGGAAAAGGTAAAATAACCTGTCCTATGATAATAAAAGCAGTAGAATTCTCAGAAAGTGCAAAAGAGAAAATAG
AATCTGCTGGTGGAGAATTTGTTGAATTATAA

Upstream 100 bases:

>100_bases
GAATTATTGAAAAAAATGATTTAATATTTATTTTTTTTTCGTTATATCCCGTATCGTAAGATATGGTTAATAACCATTTC
ATACATCAGGTGATTACCCT

Downstream 100 bases:

>100_bases
TTTATTAAAAAAAATTCCCATTTTTTTATTATTATTTATCATTTTTAACGATGATAAATATTATAATTCTAATATTATTA
TTTTTAAATTTAATGTATTT

Product: 50S ribosomal protein L15P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MIRKSKKITKLRGSRTCGYGAAKKHRGAGHKGGKGLAGVTKHRWIHTVKYMPDHIGKYGFKRHSSLIKELKVINLGQLDE
IVSKNKESFEIVDGKIVIDITTLDYEKVLGKGKITCPMIIKAVEFSESAKEKIESAGGEFVEL

Sequences:

>Translated_143_residues
MIRKSKKITKLRGSRTCGYGAAKKHRGAGHKGGKGLAGVTKHRWIHTVKYMPDHIGKYGFKRHSSLIKELKVINLGQLDE
IVSKNKESFEIVDGKIVIDITTLDYEKVLGKGKITCPMIIKAVEFSESAKEKIESAGGEFVEL
>Mature_143_residues
MIRKSKKITKLRGSRTCGYGAAKKHRGAGHKGGKGLAGVTKHRWIHTVKYMPDHIGKYGFKRHSSLIKELKVINLGQLDE
IVSKNKESFEIVDGKIVIDITTLDYEKVLGKGKITCPMIIKAVEFSESAKEKIESAGGEFVEL

Specific function: Binds to the 23S rRNA

COG id: COG0200

COG function: function code J; Ribosomal protein L15

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L15P family

Homologues:

Organism=Homo sapiens, GI4506625, Length=148, Percent_Identity=38.5135135135135, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17509867, Length=145, Percent_Identity=38.6206896551724, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6321335, Length=152, Percent_Identity=36.8421052631579, Blast_Score=67, Evalue=7e-13,
Organism=Drosophila melanogaster, GI17136880, Length=142, Percent_Identity=39.4366197183099, Blast_Score=70, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL15_META3 (A6UWW0)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001325594.1
- ProteinModelPortal:   A6UWW0
- SMR:   A6UWW0
- STRING:   A6UWW0
- GeneID:   5327297
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_1406
- eggNOG:   arNOG11273
- HOGENOM:   HBG727142
- OMA:   GSRTCGG
- ProtClustDB:   PRK06419
- BioCyc:   MAEO419665:MAEO_1406-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_01341_A
- InterPro:   IPR001196
- InterPro:   IPR021131

Pfam domain/function: PF00828 Ribosomal_L18e; SSF52080 Ribosomal_L18e/L15

EC number: NA

Molecular weight: Translated: 15867; Mature: 15867

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS00475 RIBOSOMAL_L15

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKSKKITKLRGSRTCGYGAAKKHRGAGHKGGKGLAGVTKHRWIHTVKYMPDHIGKYGF
CCCCCCHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHH
KRHSSLIKELKVINLGQLDEIVSKNKESFEIVDGKIVIDITTLDYEKVLGKGKITCPMII
HHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEECCEEEEEEECCCHHHHHCCCCCCHHHHH
KAVEFSESAKEKIESAGGEFVEL
HHHHHHHHHHHHHHHCCCCEECC
>Mature Secondary Structure
MIRKSKKITKLRGSRTCGYGAAKKHRGAGHKGGKGLAGVTKHRWIHTVKYMPDHIGKYGF
CCCCCCHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHH
KRHSSLIKELKVINLGQLDEIVSKNKESFEIVDGKIVIDITTLDYEKVLGKGKITCPMII
HHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEECCEEEEEEECCCHHHHHCCCCCCHHHHH
KAVEFSESAKEKIESAGGEFVEL
HHHHHHHHHHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA