Definition | Methanococcus aeolicus Nankai-3, complete genome. |
---|---|
Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is rps14P [H]
Identifier: 150401820
GI number: 150401820
Start: 1456250
End: 1456411
Strand: Direct
Name: rps14P [H]
Synonym: Maeo_1398
Alternate gene names: 150401820
Gene position: 1456250-1456411 (Clockwise)
Preceding gene: 150401819
Following gene: 150401821
Centisome position: 92.78
GC content: 32.1
Gene sequence:
>162_bases ATGGCAAAAACACCATTCAAGAAGAAATACGGATATGGTTCAAAAATATGCAAGAGATGCGGTAAAAATGGACCAGGAAT TATAAGTAAATATGGAATAAATATGTGCAGACAATGCTTTAGGCAGTTAGCATCGGAATTAGGATTTAAAAAGTATGATT AA
Upstream 100 bases:
>100_bases AACTATATATGGTATAAAGGTAGAGCAGGAATAATTTTGAGTAATCTCTTATATTGTAAAAAGGAGCTCCTCGGAGCATA AATAAAAAGTTGGTGAAACG
Downstream 100 bases:
>100_bases ATAAATTAAGGAGGTATCAATATGAGTCTAATGGACCCACTTGCGAATGCATTGAACCACCTATCCAACTGTGAAAGAGT AGGAAAGGATGTGGCATATG
Product: 30S ribosomal protein S14P
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 53; Mature: 52
Protein sequence:
>53_residues MAKTPFKKKYGYGSKICKRCGKNGPGIISKYGINMCRQCFRQLASELGFKKYD
Sequences:
>Translated_53_residues MAKTPFKKKYGYGSKICKRCGKNGPGIISKYGINMCRQCFRQLASELGFKKYD >Mature_52_residues AKTPFKKKYGYGSKICKRCGKNGPGIISKYGINMCRQCFRQLASELGFKKYD
Specific function: Binds 16S rRNA, required for the assembly of 30S particles [H]
COG id: COG0199
COG function: function code J; Ribosomal protein S14
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein S14P family. Zinc- binding S14P subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001209 - InterPro: IPR018271 [H]
Pfam domain/function: PF00253 Ribosomal_S14 [H]
EC number: NA
Molecular weight: Translated: 6043; Mature: 5912
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: PS00527 RIBOSOMAL_S14
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 11.3 %Cys+Met (Translated Protein) 7.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 9.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTPFKKKYGYGSKICKRCGKNGPGIISKYGINMCRQCFRQLASELGFKKYD CCCCCCCHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AKTPFKKKYGYGSKICKRCGKNGPGIISKYGINMCRQCFRQLASELGFKKYD CCCCCCHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA