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The map label for this gene is rps4e

Identifier: 150401818

GI number: 150401818

Start: 1454860

End: 1455594

Strand: Direct

Name: rps4e

Synonym: Maeo_1396

Alternate gene names: 150401818

Gene position: 1454860-1455594 (Clockwise)

Preceding gene: 150401817

Following gene: 150401819

Centisome position: 92.7

GC content: 34.01

Gene sequence:

>735_bases
ATGGCAAATAAAGGACCAAGGAAGCATTTGAAAAGACTACCCGCTCCAAAAAACTGGCAAATTTCAAGAAAAACCAATAA
ATATACTACAAGACCATCCGCAGGACCTCATGCAATGGGGAGCTCCTTGCCGTTATTGTTGGTTCTTAGAGATTTATTAG
GTTATGCCGATAATGCAAGAGAGGCAAAAAAAGTTATTAAAATGGGTAAAGTGTTAGTTGATGGAGTAAAAAGAAAAGAC
CACAGATACCCGACAGGTTTAATGGATGTAATATCATTACCTGATGCAAATGAAAGCTTTTTGGTAGTATTGGATGAAAA
AGGTAGAATTAAATTAAATAAAATAAAAGATAACACTAAAAAGTTATGTAAAATTGAAAATAAAACTGTTATAAAAGGCG
GACACATTCAGTTAAACCTTCACGATGGTAGAAATCAAATAGTAAAACTTGCCGATGCTACAAAAGCTGAGGAAGATATT
TATAAAACAGGAGATTGTGTTATTCTCTCTATTCCAGAACAGAGCATAGTAGGACATGTTCAGTTTGGTGAAGGAAAATT
GGCATACATCACAGGCGGTAAACACGTAGGCGATTTTGCAAAAATAATAGGTATAGAGAAAAAACAATTATATCCTGATA
TAATTACACTTGAAACAGAAAACGGAGAGCAGTTCAAAACCATTAGAGACTATGTTTTCATAGTTGGTGACGACAAACCT
GTTATTTCAATGTAA

Upstream 100 bases:

>100_bases
TCAAATGTTATGATTGTTAAGATGGACGATTCTGACGATAGAAGATTTAAATTTTCAAATAAATAATTGATGAATTGAAG
AATTATATGAAGGTGCGAAT

Downstream 100 bases:

>100_bases
TGAAGTGAATATAAAATATATACAATAAATATACGGTGGAAACATGAACTTCCAAGAAGCATGGGAAAAACAGCCTATGA
GTAAGCCTAGAATAGAGAAG

Product: 30S ribosomal protein S4e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MANKGPRKHLKRLPAPKNWQISRKTNKYTTRPSAGPHAMGSSLPLLLVLRDLLGYADNAREAKKVIKMGKVLVDGVKRKD
HRYPTGLMDVISLPDANESFLVVLDEKGRIKLNKIKDNTKKLCKIENKTVIKGGHIQLNLHDGRNQIVKLADATKAEEDI
YKTGDCVILSIPEQSIVGHVQFGEGKLAYITGGKHVGDFAKIIGIEKKQLYPDIITLETENGEQFKTIRDYVFIVGDDKP
VISM

Sequences:

>Translated_244_residues
MANKGPRKHLKRLPAPKNWQISRKTNKYTTRPSAGPHAMGSSLPLLLVLRDLLGYADNAREAKKVIKMGKVLVDGVKRKD
HRYPTGLMDVISLPDANESFLVVLDEKGRIKLNKIKDNTKKLCKIENKTVIKGGHIQLNLHDGRNQIVKLADATKAEEDI
YKTGDCVILSIPEQSIVGHVQFGEGKLAYITGGKHVGDFAKIIGIEKKQLYPDIITLETENGEQFKTIRDYVFIVGDDKP
VISM
>Mature_243_residues
ANKGPRKHLKRLPAPKNWQISRKTNKYTTRPSAGPHAMGSSLPLLLVLRDLLGYADNAREAKKVIKMGKVLVDGVKRKDH
RYPTGLMDVISLPDANESFLVVLDEKGRIKLNKIKDNTKKLCKIENKTVIKGGHIQLNLHDGRNQIVKLADATKAEEDIY
KTGDCVILSIPEQSIVGHVQFGEGKLAYITGGKHVGDFAKIIGIEKKQLYPDIITLETENGEQFKTIRDYVFIVGDDKPV
ISM

Specific function: Unknown

COG id: COG1471

COG function: function code J; Ribosomal protein S4E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain

Homologues:

Organism=Homo sapiens, GI4506727, Length=244, Percent_Identity=34.0163934426229, Blast_Score=144, Evalue=9e-35,
Organism=Homo sapiens, GI4506725, Length=244, Percent_Identity=33.1967213114754, Blast_Score=142, Evalue=3e-34,
Organism=Homo sapiens, GI88703062, Length=244, Percent_Identity=31.9672131147541, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17543386, Length=244, Percent_Identity=36.4754098360656, Blast_Score=153, Evalue=8e-38,
Organism=Saccharomyces cerevisiae, GI6322605, Length=244, Percent_Identity=37.2950819672131, Blast_Score=152, Evalue=4e-38,
Organism=Saccharomyces cerevisiae, GI6321997, Length=244, Percent_Identity=37.2950819672131, Blast_Score=152, Evalue=4e-38,
Organism=Drosophila melanogaster, GI24663672, Length=244, Percent_Identity=36.4754098360656, Blast_Score=148, Evalue=3e-36,
Organism=Drosophila melanogaster, GI24663668, Length=244, Percent_Identity=36.4754098360656, Blast_Score=148, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS4E_META3 (A6UWV0)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001325584.1
- ProteinModelPortal:   A6UWV0
- STRING:   A6UWV0
- GeneID:   5327232
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_1396
- eggNOG:   arNOG06304
- HOGENOM:   HBG392118
- OMA:   QLNLHDG
- ProtClustDB:   PRK04313
- BioCyc:   MAEO419665:MAEO_1396-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00485
- InterPro:   IPR000876
- InterPro:   IPR022994
- InterPro:   IPR013845
- InterPro:   IPR013843
- InterPro:   IPR002942
- PANTHER:   PTHR11581
- PIRSF:   PIRSF002116
- ProDom:   PD002667
- SMART:   SM00363

Pfam domain/function: PF00900 Ribosomal_S4e; PF08071 RS4NT; PF01479 S4

EC number: NA

Molecular weight: Translated: 27219; Mature: 27088

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS00528 RIBOSOMAL_S4E; PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANKGPRKHLKRLPAPKNWQISRKTNKYTTRPSAGPHAMGSSLPLLLVLRDLLGYADNAR
CCCCCHHHHHHHCCCCCCEEEEECCCCEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCHH
EAKKVIKMGKVLVDGVKRKDHRYPTGLMDVISLPDANESFLVVLDEKGRIKLNKIKDNTK
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCEEEEECCCCHH
KLCKIENKTVIKGGHIQLNLHDGRNQIVKLADATKAEEDIYKTGDCVILSIPEQSIVGHV
HHHEECCCEEEECCEEEEEEECCCCCEEEEHHCCCCHHHHHCCCCEEEEECCCHHEEEEE
QFGEGKLAYITGGKHVGDFAKIIGIEKKQLYPDIITLETENGEQFKTIRDYVFIVGDDKP
EECCCEEEEEECCCCHHHHHHHHCCCHHHCCCCEEEEECCCCCHHEEEEEEEEEEECCCC
VISM
CCCC
>Mature Secondary Structure 
ANKGPRKHLKRLPAPKNWQISRKTNKYTTRPSAGPHAMGSSLPLLLVLRDLLGYADNAR
CCCCHHHHHHHCCCCCCEEEEECCCCEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCHH
EAKKVIKMGKVLVDGVKRKDHRYPTGLMDVISLPDANESFLVVLDEKGRIKLNKIKDNTK
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCEEEEECCCCHH
KLCKIENKTVIKGGHIQLNLHDGRNQIVKLADATKAEEDIYKTGDCVILSIPEQSIVGHV
HHHEECCCEEEECCEEEEEEECCCCCEEEEHHCCCCHHHHHCCCCEEEEECCCHHEEEEE
QFGEGKLAYITGGKHVGDFAKIIGIEKKQLYPDIITLETENGEQFKTIRDYVFIVGDDKP
EECCCEEEEEECCCCHHHHHHHHCCCHHHCCCCEEEEECCCCCHHEEEEEEEEEEECCCC
VISM
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA