Click here to switch to the map view.

The map label for this gene is rnp1

Identifier: 150401814

GI number: 150401814

Start: 1453210

End: 1453500

Strand: Direct

Name: rnp1

Synonym: Maeo_1392

Alternate gene names: 150401814

Gene position: 1453210-1453500 (Clockwise)

Preceding gene: 150401813

Following gene: 150401815

Centisome position: 92.59

GC content: 29.9

Gene sequence:

>291_bases
ATGATTACTCCATACAATATATTAAGACATGAATTAATCGGATTAGATGTAGAAATTACTCAATCAACCAATAAGTCTCT
GGTTGGACTAAAAGGAAAGATTGTATATGAAACTCGAAATACTATTAATATTGAGAGATTCGACAATTCCAAAGAGGTAA
TGATACCAAAAGATATCGCTGTATTCAAGTTTAAATTAAACGAAGAATACATTGAGGTTATTGGTGAATTACTGATGGGG
AGACCAGAAGATAGGTTGAAGAGGAAAATTAAAAACATATATCCATATTAA

Upstream 100 bases:

>100_bases
ACCATATATGTAGGTTTTATACTATTTGATTACTTGATTATATACGACCTAAGGATGCTTAGGCACACCCTAAGGTTTAT
GCTGGGTAGAGGGACACCCA

Downstream 100 bases:

>100_bases
TCCTATTTTAAAGTCCCAACTATAATTCAAATTTCATTATATAGTATGCTTTCAAGATAAACAGTTATATCATAAATACA
TAATCGGCGTAGGCTAATTA

Product: ribonuclease P protein component 1

Products: NA

Alternate protein names: RNase P component 1

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MITPYNILRHELIGLDVEITQSTNKSLVGLKGKIVYETRNTINIERFDNSKEVMIPKDIAVFKFKLNEEYIEVIGELLMG
RPEDRLKRKIKNIYPY

Sequences:

>Translated_96_residues
MITPYNILRHELIGLDVEITQSTNKSLVGLKGKIVYETRNTINIERFDNSKEVMIPKDIAVFKFKLNEEYIEVIGELLMG
RPEDRLKRKIKNIYPY
>Mature_96_residues
MITPYNILRHELIGLDVEITQSTNKSLVGLKGKIVYETRNTINIERFDNSKEVMIPKDIAVFKFKLNEEYIEVIGELLMG
RPEDRLKRKIKNIYPY

Specific function: Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends

COG id: COG1588

COG function: function code J; RNase P/RNase MRP subunit p29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the eukaryotic/archaeal RNase P protein component 1 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNP1_META3 (A6UWU6)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001325580.1
- ProteinModelPortal:   A6UWU6
- SMR:   A6UWU6
- STRING:   A6UWU6
- GeneID:   5326403
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_1392
- eggNOG:   arNOG12604
- HOGENOM:   HBG704950
- OMA:   ISTKGRV
- ProtClustDB:   PRK03879
- BioCyc:   MAEO419665:MAEO_1392-MONOMER
- HAMAP:   MF_00754
- InterPro:   IPR002730
- Gene3D:   G3DSA:2.30.30.210

Pfam domain/function: PF01868 UPF0086; SSF101744 RNase_P_Rpp29

EC number: =3.1.26.5

Molecular weight: Translated: 11299; Mature: 11299

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITPYNILRHELIGLDVEITQSTNKSLVGLKGKIVYETRNTINIERFDNSKEVMIPKDIA
CCCCHHHHHHHHHCCCEEEECCCCCEEECCCCEEEEECCCEEEEEEECCCCEEEECCCEE
VFKFKLNEEYIEVIGELLMGRPEDRLKRKIKNIYPY
EEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MITPYNILRHELIGLDVEITQSTNKSLVGLKGKIVYETRNTINIERFDNSKEVMIPKDIA
CCCCHHHHHHHHHCCCEEEECCCCCEEECCCCEEEEECCCEEEEEEECCCCEEEECCCEE
VFKFKLNEEYIEVIGELLMGRPEDRLKRKIKNIYPY
EEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA