Definition | Methanococcus aeolicus Nankai-3, complete genome. |
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Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is rpl29p
Identifier: 150401812
GI number: 150401812
Start: 1452403
End: 1452600
Strand: Direct
Name: rpl29p
Synonym: Maeo_1390
Alternate gene names: 150401812
Gene position: 1452403-1452600 (Clockwise)
Preceding gene: 150401811
Following gene: 150401813
Centisome position: 92.54
GC content: 31.82
Gene sequence:
>198_bases ATGGCTATATTAAGAGCAAGCGAAATAAGAGAAATGTCTGCTTCTGAACTCAACGACAAATTAGTTGAAATAAAAAAGGA ATTGATGAAGGAAAATTCCAACAAAGCAACTGGTGGAGCTCCTTCAAATCCTGGTAAAGTTAAAGAGTTAAAGAGAACAG TAGCAAGAATTAAAACAATAATGAATGAAAAGAAATAA
Upstream 100 bases:
>100_bases CACTTCCTGATGAAATTGTTATAAAAGATGTGCCAAGTAAAACCACCGTAGAAACAGTGGAAGAATAAATAAAATATAAT TAACTATTATTGGTGAGAAT
Downstream 100 bases:
>100_bases GCAATGCAATTATGCATTGTATCAAGGGGTGCAGTAATGCCTGAAATTTGTCCAGTATGTGGGCTACCAACAGAATTGTG CGTATGTGAAGAAATTGCAA
Product: 50S ribosomal protein L29P
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MAILRASEIREMSASELNDKLVEIKKELMKENSNKATGGAPSNPGKVKELKRTVARIKTIMNEKK
Sequences:
>Translated_65_residues MAILRASEIREMSASELNDKLVEIKKELMKENSNKATGGAPSNPGKVKELKRTVARIKTIMNEKK >Mature_64_residues AILRASEIREMSASELNDKLVEIKKELMKENSNKATGGAPSNPGKVKELKRTVARIKTIMNEKK
Specific function: Unknown
COG id: COG0255
COG function: function code J; Ribosomal protein L29
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L29P family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RL29_META3 (A6UWU4)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001325578.1 - ProteinModelPortal: A6UWU4 - SMR: A6UWU4 - STRING: A6UWU4 - GeneID: 5327491 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_1390 - eggNOG: arNOG14143 - HOGENOM: HBG730819 - OMA: APENPGR - ProtClustDB: PRK14549 - BioCyc: MAEO419665:MAEO_1390-MONOMER - GO: GO:0005840 - GO: GO:0006412 - HAMAP: MF_00374_A - InterPro: IPR001854 - InterPro: IPR018254 - Gene3D: G3DSA:1.10.287.310 - TIGRFAMs: TIGR00012
Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29
EC number: NA
Molecular weight: Translated: 7256; Mature: 7124
Theoretical pI: Translated: 10.71; Mature: 10.71
Prosite motif: PS00579 RIBOSOMAL_L29
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILRASEIREMSASELNDKLVEIKKELMKENSNKATGGAPSNPGKVKELKRTVARIKTI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH MNEKK HHCCC >Mature Secondary Structure AILRASEIREMSASELNDKLVEIKKELMKENSNKATGGAPSNPGKVKELKRTVARIKTI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH MNEKK HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA