Definition | Methanococcus aeolicus Nankai-3, complete genome. |
---|---|
Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is 150401753
Identifier: 150401753
GI number: 150401753
Start: 1392882
End: 1393811
Strand: Direct
Name: 150401753
Synonym: Maeo_1331
Alternate gene names: NA
Gene position: 1392882-1393811 (Clockwise)
Preceding gene: 150401752
Following gene: 150401759
Centisome position: 88.75
GC content: 30.32
Gene sequence:
>930_bases ATGGACATAATGATTATAATAATTTTATTAATATTAACGGGATATTTATCAAAATATTTAAAAATATTAAAAGAACAGGA TAGAACTGTGCTTAATAATATTGTGGTTTATATTGCCATGCCATCTACCATATTTTTAACAATAATGTCTAATGTTTCGC CCTCTGATTTACCTCAATATATAAAACTTCCATTTTTAATATTTATAACATTTGCATTATGTGGGGGTATTGGGTATATT ATTGGGAGACTGTTAAAATTAAATAAAGAATCATTAGGGGGGTTAATATTAGTTTGTGGATTGGCTAACACTGGATTTTT AGGATATCCTATTATATATGGATTTTATGGTTCGGAGGGGCTATCAAGAGCAATATTTTGCGACATGGGAGGAGTATTCA CAAGTTTATTGTTTGGAACTTATGTTGGCATAACCTTTGGAAGAAGTAATATTGATAAAAATAAAAATGTTTTAAAATCA GTAATAACGGAGCTCCTAAAATTCCCACCGCTAATAACTGCTATGATTAGTGTGCTTTTGATATTGTTGGGCGTATCTAT TTCCAATTTACCAGAATATTTTACAAATACATTATCCTATTTATCAAATGCCACAATTCCATTAATTATGATTTCATTGG GGCTGTCTTTATCTCCAAGCTCTGCAAAATTTGGAATGAAATTTGGACTTATAGCAACCATTGTAAGAATGGGGATTGCA CCACTAATTATGTTAGGGAGCTCCATTATATTTTCAATGGGCGGATTGGAAAAAAATGTATTATTACTTGAATCAGCTAT GCCCTCTGCAATGATGTCACTTGTATTTGCTGTGCTTTATGATTTAGATGTAAAATTAGTTGCTTCGGCATGTTTCATAA CTACTGTTATTTCTTTTGCAATTTTGCCGATAATATATAGTTTATTATAA
Upstream 100 bases:
>100_bases AAACCAATATCTACAACAAGAATAAGAAATAAAGAAATAAATGAAAAGGGAGAATTAATTAAAGATTAATTTAAAATTAA TATATAATCTGGTGTAAAAA
Downstream 100 bases:
>100_bases AATAATAAAAAATTTAAGTAAAAAACAGTATAAAAAAATAAAATAAGCTAAAAAAATAAGTTATGTCCAATTAATAAATA TGTCATTTTCATTTCTTGTT
Product: auxin efflux carrier
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MDIMIIIILLILTGYLSKYLKILKEQDRTVLNNIVVYIAMPSTIFLTIMSNVSPSDLPQYIKLPFLIFITFALCGGIGYI IGRLLKLNKESLGGLILVCGLANTGFLGYPIIYGFYGSEGLSRAIFCDMGGVFTSLLFGTYVGITFGRSNIDKNKNVLKS VITELLKFPPLITAMISVLLILLGVSISNLPEYFTNTLSYLSNATIPLIMISLGLSLSPSSAKFGMKFGLIATIVRMGIA PLIMLGSSIIFSMGGLEKNVLLLESAMPSAMMSLVFAVLYDLDVKLVASACFITTVISFAILPIIYSLL
Sequences:
>Translated_309_residues MDIMIIIILLILTGYLSKYLKILKEQDRTVLNNIVVYIAMPSTIFLTIMSNVSPSDLPQYIKLPFLIFITFALCGGIGYI IGRLLKLNKESLGGLILVCGLANTGFLGYPIIYGFYGSEGLSRAIFCDMGGVFTSLLFGTYVGITFGRSNIDKNKNVLKS VITELLKFPPLITAMISVLLILLGVSISNLPEYFTNTLSYLSNATIPLIMISLGLSLSPSSAKFGMKFGLIATIVRMGIA PLIMLGSSIIFSMGGLEKNVLLLESAMPSAMMSLVFAVLYDLDVKLVASACFITTVISFAILPIIYSLL >Mature_309_residues MDIMIIIILLILTGYLSKYLKILKEQDRTVLNNIVVYIAMPSTIFLTIMSNVSPSDLPQYIKLPFLIFITFALCGGIGYI IGRLLKLNKESLGGLILVCGLANTGFLGYPIIYGFYGSEGLSRAIFCDMGGVFTSLLFGTYVGITFGRSNIDKNKNVLKS VITELLKFPPLITAMISVLLILLGVSISNLPEYFTNTLSYLSNATIPLIMISLGLSLSPSSAKFGMKFGLIATIVRMGIA PLIMLGSSIIFSMGGLEKNVLLLESAMPSAMMSLVFAVLYDLDVKLVASACFITTVISFAILPIIYSLL
Specific function: Unknown
COG id: COG0679
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004776 - InterPro: IPR014024 [H]
Pfam domain/function: PF03547 Mem_trans [H]
EC number: NA
Molecular weight: Translated: 33513; Mature: 33513
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIMIIIILLILTGYLSKYLKILKEQDRTVLNNIVVYIAMPSTIFLTIMSNVSPSDLPQY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHCCCCCCCHHH IKLPFLIFITFALCGGIGYIIGRLLKLNKESLGGLILVCGLANTGFLGYPIIYGFYGSEG HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCEEEEEECCCCCCCHHHHHHCCCCCCC LSRAIFCDMGGVFTSLLFGTYVGITFGRSNIDKNKNVLKSVITELLKFPPLITAMISVLL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH ILLGVSISNLPEYFTNTLSYLSNATIPLIMISLGLSLSPSSAKFGMKFGLIATIVRMGIA HHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH PLIMLGSSIIFSMGGLEKNVLLLESAMPSAMMSLVFAVLYDLDVKLVASACFITTVISFA HHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILPIIYSLL HHHHHHHHC >Mature Secondary Structure MDIMIIIILLILTGYLSKYLKILKEQDRTVLNNIVVYIAMPSTIFLTIMSNVSPSDLPQY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHCCCCCCCHHH IKLPFLIFITFALCGGIGYIIGRLLKLNKESLGGLILVCGLANTGFLGYPIIYGFYGSEG HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCEEEEEECCCCCCCHHHHHHCCCCCCC LSRAIFCDMGGVFTSLLFGTYVGITFGRSNIDKNKNVLKSVITELLKFPPLITAMISVLL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH ILLGVSISNLPEYFTNTLSYLSNATIPLIMISLGLSLSPSSAKFGMKFGLIATIVRMGIA HHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH PLIMLGSSIIFSMGGLEKNVLLLESAMPSAMMSLVFAVLYDLDVKLVASACFITTVISFA HHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILPIIYSLL HHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]