Definition | Methanococcus aeolicus Nankai-3, complete genome. |
---|---|
Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is aegA [C]
Identifier: 150401708
GI number: 150401708
Start: 1345342
End: 1345758
Strand: Direct
Name: aegA [C]
Synonym: Maeo_1286
Alternate gene names: 150401708
Gene position: 1345342-1345758 (Clockwise)
Preceding gene: 150401707
Following gene: 150401710
Centisome position: 85.72
GC content: 32.61
Gene sequence:
>417_bases ATGAAACTAATGCCAAATGTCAAAAATTGCGTGGATTGTAAAAGATGCGAAAGGGTATGCCCAAATAATGGCATGATTGT AATAGATGGGGTGCCATTAAAATGTATGCACTGTGAAGATGCACCTTGTTTAAATATATGTCCAGAAGGGGCAATTAAAA GAATAAATGATAAAGTAGTAGTAATTAGTGATGAATGTATCGGGTGCGAGTTATGTGTAAGTGCCTGTCCATTTGGGGCT ATGAGAATGGATTTAAGTTCAAAAGTTGCATATAAATGTAATGGATGCTATGAATTAGATGAAGAAGTATGTAAATTAGC CTGTCCAACAAATGCCCTTGATTACAGCGAAAAAGAAGTAGAGGAAAAACAAAAAATATATGTTTCCAAACTTAAAAAAA TATATTCATATATTTAA
Upstream 100 bases:
>100_bases ATTATATATTAAAAAATTAGTTGGAATATCCTTACTACCTAGGAGCTCCTGAATAGATTCTATATTTTTCTTATTTTTAT TTTATATTTTTGGTGAAATA
Downstream 100 bases:
>100_bases TTAATAATTTTTTATTTATTTTTTTATTCCTTTATTCATTCTATTAAAATTATTTCTGGTTTTAAAACATCTTTTTTAAT TTCGAACGACATAACCGTTT
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MKLMPNVKNCVDCKRCERVCPNNGMIVIDGVPLKCMHCEDAPCLNICPEGAIKRINDKVVVISDECIGCELCVSACPFGA MRMDLSSKVAYKCNGCYELDEEVCKLACPTNALDYSEKEVEEKQKIYVSKLKKIYSYI
Sequences:
>Translated_138_residues MKLMPNVKNCVDCKRCERVCPNNGMIVIDGVPLKCMHCEDAPCLNICPEGAIKRINDKVVVISDECIGCELCVSACPFGA MRMDLSSKVAYKCNGCYELDEEVCKLACPTNALDYSEKEVEEKQKIYVSKLKKIYSYI >Mature_138_residues MKLMPNVKNCVDCKRCERVCPNNGMIVIDGVPLKCMHCEDAPCLNICPEGAIKRINDKVVVISDECIGCELCVSACPFGA MRMDLSSKVAYKCNGCYELDEEVCKLACPTNALDYSEKEVEEKQKIYVSKLKKIYSYI
Specific function: Unknown
COG id: COG1142
COG function: function code C; Fe-S-cluster-containing hydrogenase components 2
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Escherichia coli, GI1788811, Length=138, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=2e-16, Organism=Escherichia coli, GI2367245, Length=97, Percent_Identity=41.2371134020619, Blast_Score=71, Evalue=2e-14, Organism=Escherichia coli, GI226510944, Length=109, Percent_Identity=36.697247706422, Blast_Score=70, Evalue=3e-14, Organism=Escherichia coli, GI1787122, Length=89, Percent_Identity=40.4494382022472, Blast_Score=70, Evalue=4e-14, Organism=Escherichia coli, GI1789067, Length=107, Percent_Identity=41.1214953271028, Blast_Score=70, Evalue=7e-14, Organism=Escherichia coli, GI1787872, Length=98, Percent_Identity=38.7755102040816, Blast_Score=69, Evalue=1e-13, Organism=Escherichia coli, GI87082180, Length=104, Percent_Identity=35.5769230769231, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI87082179, Length=150, Percent_Identity=32, Blast_Score=67, Evalue=5e-13, Organism=Escherichia coli, GI2367345, Length=110, Percent_Identity=33.6363636363636, Blast_Score=65, Evalue=1e-12, Organism=Escherichia coli, GI1787749, Length=105, Percent_Identity=38.0952380952381, Blast_Score=65, Evalue=2e-12, Organism=Escherichia coli, GI1790326, Length=91, Percent_Identity=39.5604395604396, Blast_Score=64, Evalue=4e-12, Organism=Escherichia coli, GI87082114, Length=144, Percent_Identity=30.5555555555556, Blast_Score=63, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 [H]
Pfam domain/function: PF00037 Fer4 [H]
EC number: NA
Molecular weight: Translated: 15446; Mature: 15446
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
11.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 15.9 %Cys+Met (Translated Protein) 11.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 15.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLMPNVKNCVDCKRCERVCPNNGMIVIDGVPLKCMHCEDAPCLNICPEGAIKRINDKVV CCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCCHHHHHCCCCEE VISDECIGCELCVSACPFGAMRMDLSSKVAYKCNGCYELDEEVCKLACPTNALDYSEKEV EEECCCCCHHHHHHHCCCCCEEECCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHH EEKQKIYVSKLKKIYSYI HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKLMPNVKNCVDCKRCERVCPNNGMIVIDGVPLKCMHCEDAPCLNICPEGAIKRINDKVV CCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCCHHHHHCCCCEE VISDECIGCELCVSACPFGAMRMDLSSKVAYKCNGCYELDEEVCKLACPTNALDYSEKEV EEECCCCCHHHHHHHCCCCCEEECCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHH EEKQKIYVSKLKKIYSYI HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]