Definition | Methanococcus aeolicus Nankai-3, complete genome. |
---|---|
Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is porB [H]
Identifier: 150401706
GI number: 150401706
Start: 1343715
End: 1344608
Strand: Direct
Name: porB [H]
Synonym: Maeo_1284
Alternate gene names: 150401706
Gene position: 1343715-1344608 (Clockwise)
Preceding gene: 150401705
Following gene: 150401707
Centisome position: 85.61
GC content: 37.47
Gene sequence:
>894_bases ATGACAAATCAATTTCCACGAGAGGAGCTCCTTGCACCGGGACATAGGGGATGTGCTGGTTGTGGGGCATCAATTATTGT TAGACAGGCGTTAAAGGCAGCTGGAAAAGATACAATAGTAGCAAATGCAACAGGTTGTTTGGAGGTTATGACCACACCAT ATCCTGAAACAGCTTGGAATGTGCCTTGGATTCATGTTGCATTTGAGAATGTTGCAGCAGTTGCAAGTGGTATGGAAAGT GCTGTAAAAGCACTTCAAAGAAAAAGAGGAAAATTCTCCGATAAAAAAATAAATGTTATAGCATTTGGTGGAGATGGAGG GACCGCAGATATTGGATTCCAAGCATTAAGTGGAGCAATGGAAAGAGGACATAATATGCTCTACATAATGTATGATAATG AAGCATATATGAATACAGGAATTCAAAGAAGTAGTTCTACGCCATTAATGGCTTCAACTACAACATCACCAGCGGGTAGT GTAATTAGAGGAGAGGACATGCCTAAAAAAGACATGCCTATGATTGTAGCAGCTCATGGTGTTCCATATGTGGCTACGGC ATGTTTAAGTTATCCTGAGGACTTCATGAAGAAAGTTAAAAAAGCATGCGAAATAGATGGGCCTGCTTTTATACATGTAT TCCAACCATGTACCACAGGATGGAGATATGAAACAAAAGATACTGTAAAATTGGGAAGATTGGCAGTAGAAACAGGAGTA TTTCCATTGTATGAAATTGAGAATGGAGATTTTAAAATATCATACAAACCAGCTAAAAGAAAACCATTAATTGAATATTT AAAACCACAAAAAAGATATAGGCATCTAACAAATGAAGATGTTGAAATGTTACAAAAGGCAGTTGATGAGAAATGCAAAT TATTGGGATATTAA
Upstream 100 bases:
>100_bases CATAATAAAACATGCTGAAAATGCAGAAGATGGCGAAACAAAATGGGTTGGATTAAATCAATAAAAAACATTATAAAAAT AAATAAAATTAGGTGATTAT
Downstream 100 bases:
>100_bases ATAAAATTAAAAATTTAAATTATTATATAATTTTTTTTAATTAATAATTTTTAATTTTTAGCTTTTTAATTTAATATATT AGTTTATTGTTATGGCGGTG
Product: pyruvate ferredoxin oxidoreductase subunit beta
Products: NA
Alternate protein names: Pyruvate oxidoreductase beta chain; POR; Pyruvic-ferredoxin oxidoreductase subunit beta [H]
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MTNQFPREELLAPGHRGCAGCGASIIVRQALKAAGKDTIVANATGCLEVMTTPYPETAWNVPWIHVAFENVAAVASGMES AVKALQRKRGKFSDKKINVIAFGGDGGTADIGFQALSGAMERGHNMLYIMYDNEAYMNTGIQRSSSTPLMASTTTSPAGS VIRGEDMPKKDMPMIVAAHGVPYVATACLSYPEDFMKKVKKACEIDGPAFIHVFQPCTTGWRYETKDTVKLGRLAVETGV FPLYEIENGDFKISYKPAKRKPLIEYLKPQKRYRHLTNEDVEMLQKAVDEKCKLLGY
Sequences:
>Translated_297_residues MTNQFPREELLAPGHRGCAGCGASIIVRQALKAAGKDTIVANATGCLEVMTTPYPETAWNVPWIHVAFENVAAVASGMES AVKALQRKRGKFSDKKINVIAFGGDGGTADIGFQALSGAMERGHNMLYIMYDNEAYMNTGIQRSSSTPLMASTTTSPAGS VIRGEDMPKKDMPMIVAAHGVPYVATACLSYPEDFMKKVKKACEIDGPAFIHVFQPCTTGWRYETKDTVKLGRLAVETGV FPLYEIENGDFKISYKPAKRKPLIEYLKPQKRYRHLTNEDVEMLQKAVDEKCKLLGY >Mature_296_residues TNQFPREELLAPGHRGCAGCGASIIVRQALKAAGKDTIVANATGCLEVMTTPYPETAWNVPWIHVAFENVAAVASGMESA VKALQRKRGKFSDKKINVIAFGGDGGTADIGFQALSGAMERGHNMLYIMYDNEAYMNTGIQRSSSTPLMASTTTSPAGSV IRGEDMPKKDMPMIVAAHGVPYVATACLSYPEDFMKKVKKACEIDGPAFIHVFQPCTTGWRYETKDTVKLGRLAVETGVF PLYEIENGDFKISYKPAKRKPLIEYLKPQKRYRHLTNEDVEMLQKAVDEKCKLLGY
Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]
COG id: COG1013
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787642, Length=335, Percent_Identity=23.2835820895522, Blast_Score=74, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.1 [H]
Molecular weight: Translated: 32643; Mature: 32512
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNQFPREELLAPGHRGCAGCGASIIVRQALKAAGKDTIVANATGCLEVMTTPYPETAWN CCCCCCCHHHCCCCCCCCHHCCHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCC VPWIHVAFENVAAVASGMESAVKALQRKRGKFSDKKINVIAFGGDGGTADIGFQALSGAM CCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHH ERGHNMLYIMYDNEAYMNTGIQRSSSTPLMASTTTSPAGSVIRGEDMPKKDMPMIVAAHG HCCCCEEEEEECCCHHHHCCCCCCCCCCEEEECCCCCCCCEEECCCCCCCCCCEEEEECC VPYVATACLSYPEDFMKKVKKACEIDGPAFIHVFQPCTTGWRYETKDTVKLGRLAVETGV CHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCEECCCHHHHHHHHHHHHCC FPLYEIENGDFKISYKPAKRKPLIEYLKPQKRYRHLTNEDVEMLQKAVDEKCKLLGY EEEEEECCCCEEEEECCCCCCCHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TNQFPREELLAPGHRGCAGCGASIIVRQALKAAGKDTIVANATGCLEVMTTPYPETAWN CCCCCCHHHCCCCCCCCHHCCHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCC VPWIHVAFENVAAVASGMESAVKALQRKRGKFSDKKINVIAFGGDGGTADIGFQALSGAM CCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHH ERGHNMLYIMYDNEAYMNTGIQRSSSTPLMASTTTSPAGSVIRGEDMPKKDMPMIVAAHG HCCCCEEEEEECCCHHHHCCCCCCCCCCEEEECCCCCCCCEEECCCCCCCCCCEEEEECC VPYVATACLSYPEDFMKKVKKACEIDGPAFIHVFQPCTTGWRYETKDTVKLGRLAVETGV CHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCEECCCHHHHHHHHHHHHCC FPLYEIENGDFKISYKPAKRKPLIEYLKPQKRYRHLTNEDVEMLQKAVDEKCKLLGY EEEEEECCCCEEEEECCCCCCCHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]