Definition | Methanococcus aeolicus Nankai-3, complete genome. |
---|---|
Accession | NC_009635 |
Length | 1,569,500 |
Click here to switch to the map view.
The map label for this gene is mtrA
Identifier: 150401695
GI number: 150401695
Start: 1336030
End: 1336752
Strand: Direct
Name: mtrA
Synonym: Maeo_1273
Alternate gene names: 150401695
Gene position: 1336030-1336752 (Clockwise)
Preceding gene: 150401694
Following gene: 150401696
Centisome position: 85.12
GC content: 36.65
Gene sequence:
>723_bases ATGGCAGATAAAAAAGCTCCTGCATCAGGATGGCCAATAGTAAGTGGCGAATATGTTGTAGGAAACCCAGAAAGCTGTGT AGCAGTTGTAACATTGGGTTCCCATGGTTTAGATGAAGCAGCTATTGAAGCAGGTGCTGCTATTTCAGGACCATGCCACA CAGAAAATTTAGGGATTGAAAAAGTTGTAGCTAATTATATATCAAATCCAAACATTAGGTTTATGTTGGTTACTGGTTCC GAAGTTCAAGGACATATTACAGGACAGTGCTTTAAAGCATTGTATGAAAATGGAATTGGAGATGATGGAGGAATTATTGG AGCAAAAGGAGCTATTCCATTTTTGGAAAATGCTGGACAAGATGCTATCAGTAGATTCCAAAATCAACTTGTGGAAATTG TAGATTTGATTGATGTTGAAGATACAGGTAAAATAAGCAGTGCTATTAAAGACTGTATTTCAAAAGACCCTGGTGCTTTC GAAGAAGATCCAATGATATTGGATTTAGAAGGCGGCGGTGGAGAAGCTGGAGCTGATGAATCTACATCAATAAAACCAGC TGCGCCAGAAACAGTATTATTGGAAGCAAGAATGAGAATGATATCTGAAAAAATAAATGATGCAGCATTAATAGCAAAAT TCAATTCAGGATATTATAATGGAAAAATACAAGGAATTGCAATAGGGTTGTTCCTATCTTTGTTAATATTCTCCTTGTTA TAG
Upstream 100 bases:
>100_bases TTGGTTTCTGGATATCTTTATCAATATTAACATTGGGATTAATACTTGTAATAGGTTTATATCCTAAATTAATAGGGTTA TAATTTGGAGGTGCTAATAT
Downstream 100 bases:
>100_bases ATATATATTGCAGATATGAATAATTTGGAGGTGCTAATATATGGCAGATAAAAAAGCTCCTGCATCAGGATGGCCAATAG TAAGTGGCGAATATGTTGTA
Product: tetrahydromethanopterin S-methyltransferase subunit A
Products: NA
Alternate protein names: N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit A
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MADKKAPASGWPIVSGEYVVGNPESCVAVVTLGSHGLDEAAIEAGAAISGPCHTENLGIEKVVANYISNPNIRFMLVTGS EVQGHITGQCFKALYENGIGDDGGIIGAKGAIPFLENAGQDAISRFQNQLVEIVDLIDVEDTGKISSAIKDCISKDPGAF EEDPMILDLEGGGGEAGADESTSIKPAAPETVLLEARMRMISEKINDAALIAKFNSGYYNGKIQGIAIGLFLSLLIFSLL
Sequences:
>Translated_240_residues MADKKAPASGWPIVSGEYVVGNPESCVAVVTLGSHGLDEAAIEAGAAISGPCHTENLGIEKVVANYISNPNIRFMLVTGS EVQGHITGQCFKALYENGIGDDGGIIGAKGAIPFLENAGQDAISRFQNQLVEIVDLIDVEDTGKISSAIKDCISKDPGAF EEDPMILDLEGGGGEAGADESTSIKPAAPETVLLEARMRMISEKINDAALIAKFNSGYYNGKIQGIAIGLFLSLLIFSLL >Mature_239_residues ADKKAPASGWPIVSGEYVVGNPESCVAVVTLGSHGLDEAAIEAGAAISGPCHTENLGIEKVVANYISNPNIRFMLVTGSE VQGHITGQCFKALYENGIGDDGGIIGAKGAIPFLENAGQDAISRFQNQLVEIVDLIDVEDTGKISSAIKDCISKDPGAFE EDPMILDLEGGGGEAGADESTSIKPAAPETVLLEARMRMISEKINDAALIAKFNSGYYNGKIQGIAIGLFLSLLIFSLL
Specific function: Part of a complex that catalyzes the formation of methyl-coenzyme M and tetrahydromethanopterin from coenzyme M and methyl-tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step
COG id: COG4063
COG function: function code H; Tetrahydromethanopterin S-methyltransferase, subunit A
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MtrA family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MTRA_META3 (A6UWH7)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001325461.1 - STRING: A6UWH7 - GeneID: 5327467 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_1273 - eggNOG: arNOG07825 - HOGENOM: HBG542039 - OMA: EPVERLQ - ProtClustDB: PRK00964 - BioCyc: MAEO419665:MAEO_1273-MONOMER - GO: GO:0005737 - GO: GO:0015948 - HAMAP: MF_01093 - InterPro: IPR005778 - InterPro: IPR013340 - TIGRFAMs: TIGR01111
Pfam domain/function: PF04208 MtrA
EC number: =2.1.1.86
Molecular weight: Translated: 25071; Mature: 24940
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: BINDING 85-85
Signals:
None
Transmembrane regions:
HASH(0x1d7180a4)-;
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKKAPASGWPIVSGEYVVGNPESCVAVVTLGSHGLDEAAIEAGAAISGPCHTENLGIE CCCCCCCCCCCCEECCCEEECCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCHH KVVANYISNPNIRFMLVTGSEVQGHITGQCFKALYENGIGDDGGIIGAKGAIPFLENAGQ HHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHCCCH DAISRFQNQLVEIVDLIDVEDTGKISSAIKDCISKDPGAFEEDPMILDLEGGGGEAGADE HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCC STSIKPAAPETVLLEARMRMISEKINDAALIAKFNSGYYNGKIQGIAIGLFLSLLIFSLL CCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCEECCEEHHHHHHHHHHHHHHHHH >Mature Secondary Structure ADKKAPASGWPIVSGEYVVGNPESCVAVVTLGSHGLDEAAIEAGAAISGPCHTENLGIE CCCCCCCCCCCEECCCEEECCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCHH KVVANYISNPNIRFMLVTGSEVQGHITGQCFKALYENGIGDDGGIIGAKGAIPFLENAGQ HHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHCCCH DAISRFQNQLVEIVDLIDVEDTGKISSAIKDCISKDPGAFEEDPMILDLEGGGGEAGADE HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCC STSIKPAAPETVLLEARMRMISEKINDAALIAKFNSGYYNGKIQGIAIGLFLSLLIFSLL CCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCEECCEEHHHHHHHHHHHHHHHHH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA