| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is mtrD [H]
Identifier: 150401692
GI number: 150401692
Start: 1333963
End: 1334679
Strand: Direct
Name: mtrD [H]
Synonym: Maeo_1270
Alternate gene names: 150401692
Gene position: 1333963-1334679 (Clockwise)
Preceding gene: 150401691
Following gene: 150401693
Centisome position: 84.99
GC content: 39.61
Gene sequence:
>717_bases ATGGTAAATATTGACATTGTAAGTTTGGCAATCCCTCTTGCAGAAATCACAATTGCGGGTGCCATTATTAATGCTAGTGT TCATTTTGTTCCAGTGGGTGGAGCTCCTGCGGCTATGGCTACTTCAACAGGAGTAGGTACAGGAACTACACAGTTGGCAG CAGGTGCTGGGTTCACTGGTTTAATGGCTGCTGCAGCATTGGCAGCTCAATCAGGTATTAGTTTAACAAATCCACTCCAT TTAGCTCTTATTATGGCATCAGGAGCAGTGGGTTCTATGATTATGCTTGGATTAACTATGTTAATTGGGCAAATGATTTA TGTATATGGTATTGGAGTAGTTCCAGCAGCAGATAAAGTAGATAAAGACCCCTTTACAGGAGATTATCAAAAATCCTACA TTACTCCGGGAACAACAGGACATGCAATTCCAACAGTATGTTTTATAAGTGGTTTAATCGGAGCAGCACTTGGAGGTATT GGTGGAGGTCTTGCTTATATTGCATTTAAATTATTGGGATTCTCCTCAGAAGTTTCAGGAGTTATTGCAGTTGGGTTTTT CTTCTTGAATGCTGTTCTTGCATCATATAATATCGGGGGAACAACAGAAGGATTCCACGACCCAAAATTCAAGAAAATAC ACTTCGGAATCGTAGCTTCATTTGTAGCTTCATTGTTATGTGGAGTTATTATTTCAGGAATGTCATTAGGAATTTAA
Upstream 100 bases:
>100_bases TGGTTATTACTACATTATTACTCAACAGAAAAATCGAAGTATATGCTAGAAATAAATTTGGACCATATACAGATAGGTAA AAAATATTTGGTGATGTATT
Downstream 100 bases:
>100_bases TATTATTGGATTAGATATTAAATTCAAATACAATAATAGTAGTTGGATTGGCGGAAACATACCCCTATATATGCTATAAA TTAATTGTATAAATTAAAAG
Product: tetrahydromethanopterin S-methyltransferase subunit D
Products: NA
Alternate protein names: N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit D [H]
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MVNIDIVSLAIPLAEITIAGAIINASVHFVPVGGAPAAMATSTGVGTGTTQLAAGAGFTGLMAAAALAAQSGISLTNPLH LALIMASGAVGSMIMLGLTMLIGQMIYVYGIGVVPAADKVDKDPFTGDYQKSYITPGTTGHAIPTVCFISGLIGAALGGI GGGLAYIAFKLLGFSSEVSGVIAVGFFFLNAVLASYNIGGTTEGFHDPKFKKIHFGIVASFVASLLCGVIISGMSLGI
Sequences:
>Translated_238_residues MVNIDIVSLAIPLAEITIAGAIINASVHFVPVGGAPAAMATSTGVGTGTTQLAAGAGFTGLMAAAALAAQSGISLTNPLH LALIMASGAVGSMIMLGLTMLIGQMIYVYGIGVVPAADKVDKDPFTGDYQKSYITPGTTGHAIPTVCFISGLIGAALGGI GGGLAYIAFKLLGFSSEVSGVIAVGFFFLNAVLASYNIGGTTEGFHDPKFKKIHFGIVASFVASLLCGVIISGMSLGI >Mature_238_residues MVNIDIVSLAIPLAEITIAGAIINASVHFVPVGGAPAAMATSTGVGTGTTQLAAGAGFTGLMAAAALAAQSGISLTNPLH LALIMASGAVGSMIMLGLTMLIGQMIYVYGIGVVPAADKVDKDPFTGDYQKSYITPGTTGHAIPTVCFISGLIGAALGGI GGGLAYIAFKLLGFSSEVSGVIAVGFFFLNAVLASYNIGGTTEGFHDPKFKKIHFGIVASFVASLLCGVIISGMSLGI
Specific function: Part of a complex that catalyzes the formation of methyl-coenzyme M and tetrahydromethanopterin from coenzyme M and methyl-tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step [H]
COG id: COG4060
COG function: function code H; Tetrahydromethanopterin S-methyltransferase, subunit D
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mtrD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005779 - ProDom: PD013594 [H]
Pfam domain/function: PF04207 MtrD [H]
EC number: =2.1.1.86 [H]
Molecular weight: Translated: 23728; Mature: 23728
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNIDIVSLAIPLAEITIAGAIINASVHFVPVGGAPAAMATSTGVGTGTTQLAAGAGFTG CCEEEEHHHHHHHHHHHHHHHEEECEEEEEECCCCCHHHHCCCCCCCCCHHHHCCCCHHH LMAAAALAAQSGISLTNPLHLALIMASGAVGSMIMLGLTMLIGQMIYVYGIGVVPAADKV HHHHHHHHHHCCCCCCCHHHEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DKDPFTGDYQKSYITPGTTGHAIPTVCFISGLIGAALGGIGGGLAYIAFKLLGFSSEVSG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHH VIAVGFFFLNAVLASYNIGGTTEGFHDPKFKKIHFGIVASFVASLLCGVIISGMSLGI HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVNIDIVSLAIPLAEITIAGAIINASVHFVPVGGAPAAMATSTGVGTGTTQLAAGAGFTG CCEEEEHHHHHHHHHHHHHHHEEECEEEEEECCCCCHHHHCCCCCCCCCHHHHCCCCHHH LMAAAALAAQSGISLTNPLHLALIMASGAVGSMIMLGLTMLIGQMIYVYGIGVVPAADKV HHHHHHHHHHCCCCCCCHHHEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DKDPFTGDYQKSYITPGTTGHAIPTVCFISGLIGAALGGIGGGLAYIAFKLLGFSSEVSG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHH VIAVGFFFLNAVLASYNIGGTTEGFHDPKFKKIHFGIVASFVASLLCGVIISGMSLGI HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA