| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is cca [H]
Identifier: 150401678
GI number: 150401678
Start: 1319660
End: 1321054
Strand: Direct
Name: cca [H]
Synonym: Maeo_1256
Alternate gene names: 150401678
Gene position: 1319660-1321054 (Clockwise)
Preceding gene: 150401677
Following gene: 150401679
Centisome position: 84.08
GC content: 27.17
Gene sequence:
>1395_bases ATGAGCAATATTAGAAAATTAGACAATGTTATAAACAACAATTATAATGACAATAAATTAAATACCGTATTAAATGAAGT ATTGCAAGATATAATTGATTACAAAGATGGGCAAGAATTAAATGGGTTTTCTAAAAAACTCATAAATGAGCTATTTGGTC AATTAAAAAAACGGAATTTCATACCTCCTGTTATCGATATTATCCAAGTAGGTTCCACAGCACGAAATACACATTTAAAA AATGACTATGATATTGATATATTTGTTAGATTTGAAAAAGGAACAGATAAAGAACTATTAAAAAATATTGTATTGGAATG CGGTAAAACCGTAATACAAAAATTAGGGGGTAAATGTTGGGTAGAATATGCCGAACATCCATATTTATCCGCAAAAGTCG ATAAATATGACATTGATATAGTGCCTTGCTATAAATTGGAGTGGGGAGATAAGATAATATCCGCAGTAGATAGAACTCCG CTTCATAATGAATTTTTAATTAATAAATTGAAAACAAAATATAATATAGAATTAATACAGGATATTAAATTATTAAAAAA ATTCTTAAAAGGTATTGGAGTATATGGTTCTGATTTAAAAACAAAAGGTTTTTCTGGCTATTTGTGTGAATTATTGATTA TATATTATGGTGGATTTATAAATCTATTAAAAGAATCTCAATATTGGAAGTTGGGACAAAAAATAATATTGCCTGACATT TATAAACTATATAATTTAAAAGACGATTATGAATTTATAGATATTCCAAACCAACCTTTAATTGTGTATGACCCAACAGA CATAAATAGAAATGTGGCTGCGGCATTGGGAAATGAAAACTTCTGTAAATTTTTATATTATTCTAATTTATTTTTAAAAA ATCCTTCAAAAGATTATTTTTATGATTATGATGCAAAAGTTGCAAAGAATATTAATAATAGGGATATGGGGGAGCTCCTC ACACTAGTAATAAATCGCCCAAAGAATATTGTGGAAGATGTTATATATCCGCAGATGGAAAAACTACAAAATAGTATAAA TGTAATATTAAAGGAGCATGATTTTAAATATATTAGATATGGCAATTATGCTGATGAAAATTATTGTTATCTTTCGTGGG AATTTACTGTTTATATGTTGCCAAATGTGCATGTTAAAGTTGGACCGCCCGTATATTATGGAAATAGGGCATATCAATTT GCAGAAAAGTATGATAAATGTTTTATTGATGGTTGCAATGTTTGCGCCTTCGTGGAGAGAAAATATAAAACTGTTTATGA ATTATTTGAAGACATTACATCAAATAAATTAAATAATAAAATCGCCACTCCAAAGTATGTAGTGCCTGAAAATGCAAAAA TACTTAATATATTTAAGGAAAAATATGAAAATTGA
Upstream 100 bases:
>100_bases ATTTTTAGTATGTATTAATTGGGAGCTCCGCATATAATATATAATATTACAAGGAGCCCCAAACAACAACCCATATATTT TTAACATACACCGTGAGACA
Downstream 100 bases:
>100_bases AAAAATAACTATTAATTATGAATTAATTAAATAATTAATATGTAATAAAATGGTGTAAAAATGAAATATAGTGTATCTTC TATTGTTTTTTTGCCTGAAT
Product: tRNA CCA-pyrophosphorylase
Products: NA
Alternate protein names: tRNA CCA-pyrophosphorylase; tRNA adenylyl-/cytidylyl- transferase; tRNA nucleotidyltransferase; tRNA-NT [H]
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MSNIRKLDNVINNNYNDNKLNTVLNEVLQDIIDYKDGQELNGFSKKLINELFGQLKKRNFIPPVIDIIQVGSTARNTHLK NDYDIDIFVRFEKGTDKELLKNIVLECGKTVIQKLGGKCWVEYAEHPYLSAKVDKYDIDIVPCYKLEWGDKIISAVDRTP LHNEFLINKLKTKYNIELIQDIKLLKKFLKGIGVYGSDLKTKGFSGYLCELLIIYYGGFINLLKESQYWKLGQKIILPDI YKLYNLKDDYEFIDIPNQPLIVYDPTDINRNVAAALGNENFCKFLYYSNLFLKNPSKDYFYDYDAKVAKNINNRDMGELL TLVINRPKNIVEDVIYPQMEKLQNSINVILKEHDFKYIRYGNYADENYCYLSWEFTVYMLPNVHVKVGPPVYYGNRAYQF AEKYDKCFIDGCNVCAFVERKYKTVYELFEDITSNKLNNKIATPKYVVPENAKILNIFKEKYEN
Sequences:
>Translated_464_residues MSNIRKLDNVINNNYNDNKLNTVLNEVLQDIIDYKDGQELNGFSKKLINELFGQLKKRNFIPPVIDIIQVGSTARNTHLK NDYDIDIFVRFEKGTDKELLKNIVLECGKTVIQKLGGKCWVEYAEHPYLSAKVDKYDIDIVPCYKLEWGDKIISAVDRTP LHNEFLINKLKTKYNIELIQDIKLLKKFLKGIGVYGSDLKTKGFSGYLCELLIIYYGGFINLLKESQYWKLGQKIILPDI YKLYNLKDDYEFIDIPNQPLIVYDPTDINRNVAAALGNENFCKFLYYSNLFLKNPSKDYFYDYDAKVAKNINNRDMGELL TLVINRPKNIVEDVIYPQMEKLQNSINVILKEHDFKYIRYGNYADENYCYLSWEFTVYMLPNVHVKVGPPVYYGNRAYQF AEKYDKCFIDGCNVCAFVERKYKTVYELFEDITSNKLNNKIATPKYVVPENAKILNIFKEKYEN >Mature_463_residues SNIRKLDNVINNNYNDNKLNTVLNEVLQDIIDYKDGQELNGFSKKLINELFGQLKKRNFIPPVIDIIQVGSTARNTHLKN DYDIDIFVRFEKGTDKELLKNIVLECGKTVIQKLGGKCWVEYAEHPYLSAKVDKYDIDIVPCYKLEWGDKIISAVDRTPL HNEFLINKLKTKYNIELIQDIKLLKKFLKGIGVYGSDLKTKGFSGYLCELLIIYYGGFINLLKESQYWKLGQKIILPDIY KLYNLKDDYEFIDIPNQPLIVYDPTDINRNVAAALGNENFCKFLYYSNLFLKNPSKDYFYDYDAKVAKNINNRDMGELLT LVINRPKNIVEDVIYPQMEKLQNSINVILKEHDFKYIRYGNYADENYCYLSWEFTVYMLPNVHVKVGPPVYYGNRAYQFA EKYDKCFIDGCNVCAFVERKYKTVYELFEDITSNKLNNKIATPKYVVPENAKILNIFKEKYEN
Specific function: Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing
COG id: COG1746
COG function: function code J; tRNA nucleotidyltransferase (CCA-adding enzyme)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. Archaeal CCA-adding enzyme subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008229 - InterPro: IPR002934 - InterPro: IPR011068 - InterPro: IPR015329 [H]
Pfam domain/function: PF01909 NTP_transf_2; PF09249 tRNA_NucTransf2 [H]
EC number: =2.7.7.21; =2.7.7.25 [H]
Molecular weight: Translated: 54347; Mature: 54216
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIRKLDNVINNNYNDNKLNTVLNEVLQDIIDYKDGQELNGFSKKLINELFGQLKKRNF CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC IPPVIDIIQVGSTARNTHLKNDYDIDIFVRFEKGTDKELLKNIVLECGKTVIQKLGGKCW CCHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEE VEYAEHPYLSAKVDKYDIDIVPCYKLEWGDKIISAVDRTPLHNEFLINKLKTKYNIELIQ EHHCCCCCEEEECCCEECEEEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH DIKLLKKFLKGIGVYGSDLKTKGFSGYLCELLIIYYGGFINLLKESQYWKLGQKIILPDI HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCEECCHHH YKLYNLKDDYEFIDIPNQPLIVYDPTDINRNVAAALGNENFCKFLYYSNLFLKNPSKDYF HHHHCCCCCCEEEECCCCCEEEECCCCCCCCHHHHCCCCCCEEHEEECCEEEECCCCCCE YDYDAKVAKNINNRDMGELLTLVINRPKNIVEDVIYPQMEKLQNSINVILKEHDFKYIRY ECCCHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEE GNYADENYCYLSWEFTVYMLPNVHVKVGPPVYYGNRAYQFAEKYDKCFIDGCNVCAFVER CCCCCCCEEEEEEEEEEEECCCEEEEECCCEEECCHHHHHHHHHHHHHHCCCCHHHHHHH KYKTVYELFEDITSNKLNNKIATPKYVVPENAKILNIFKEKYEN HHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHCC >Mature Secondary Structure SNIRKLDNVINNNYNDNKLNTVLNEVLQDIIDYKDGQELNGFSKKLINELFGQLKKRNF CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC IPPVIDIIQVGSTARNTHLKNDYDIDIFVRFEKGTDKELLKNIVLECGKTVIQKLGGKCW CCHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEE VEYAEHPYLSAKVDKYDIDIVPCYKLEWGDKIISAVDRTPLHNEFLINKLKTKYNIELIQ EHHCCCCCEEEECCCEECEEEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH DIKLLKKFLKGIGVYGSDLKTKGFSGYLCELLIIYYGGFINLLKESQYWKLGQKIILPDI HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCEECCHHH YKLYNLKDDYEFIDIPNQPLIVYDPTDINRNVAAALGNENFCKFLYYSNLFLKNPSKDYF HHHHCCCCCCEEEECCCCCEEEECCCCCCCCHHHHCCCCCCEEHEEECCEEEECCCCCCE YDYDAKVAKNINNRDMGELLTLVINRPKNIVEDVIYPQMEKLQNSINVILKEHDFKYIRY ECCCHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEE GNYADENYCYLSWEFTVYMLPNVHVKVGPPVYYGNRAYQFAEKYDKCFIDGCNVCAFVER CCCCCCCEEEEEEEEEEEECCCEEEEECCCEEECCHHHHHHHHHHHHHHCCCCHHHHHHH KYKTVYELFEDITSNKLNNKIATPKYVVPENAKILNIFKEKYEN HHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA