Definition | Methanococcus aeolicus Nankai-3, complete genome. |
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Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is hisA
Identifier: 150401623
GI number: 150401623
Start: 1268895
End: 1269620
Strand: Direct
Name: hisA
Synonym: Maeo_1200
Alternate gene names: 150401623
Gene position: 1268895-1269620 (Clockwise)
Preceding gene: 150401622
Following gene: 150401624
Centisome position: 80.85
GC content: 33.2
Gene sequence:
>726_bases ATGATAGTAATTCCAGCAGTAGATATAAAAAATAAAAAATGTGTTCAGTTGATACAGGGAAATCCTGATAAAAAACATAT AGAATTAGATAATCCATTGGAAGTTGCAGAAAAATGGATAAAATGCGGGGCTGAAATGATACATTTGGTTGATTTAGATA GTGCCATATATGGAACTGATACAAATAAAGAAACCATAAAAAAAATTATAGAATCTGTTCCCGTTCCCGTTGAAGTGGGC GGAGGGGTAAGAACCGTAGAAGATGCCCTAAATTTAATAGACCTTGGAGCAGAACGAGTAATATTGGGGACATCGGCTGT AAAAAATCCAGAGATAATAACGGAGCTCCTTGAAAAAGGAATAAATTCTGAAAAGATAATGGTGGCGTTGGATGCAAAAG ATGGAAAAGTTGTAATAAAGGGTTGGATGGAGAAAACAGAATATACTCCAATAGAAATTGGTAAAATACTTGAAGAAAAA GGTGCAGGAAGTATATTATTTACTAATGTAGATGTAGAAGGACTATTGGACGGAATAGACATTGAACCTGTTAAAAAATT AGTAGATGAGTTAAATATTCCTATAATTGCATCTGGGGGAATAACTACATATGACGACCTTCTGAAATTAAAAGAAATTG GGGTTGATGGTGTTGTTGTTGGTTCTGCAATATATAAGGAAATGATGGATTTGAAAAAAGCAATAAAAATAGTAAAAGGT GAATAA
Upstream 100 bases:
>100_bases GATTGACTATGCAGTATATTCGGAGCTCCAATATAACAATAATATCAATACCAATATTAAATTAATATTAAATCTTTTCA AACACACGCATGGTGAAAAT
Downstream 100 bases:
>100_bases ATGAATAATAAAATAATAACTGTTGGACATATAGCATTGGATTATATATTTAATGTAGCGGAGCTCCCTAAACCAAATAC CTCCGTTCAAATACCTACGG
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MIVIPAVDIKNKKCVQLIQGNPDKKHIELDNPLEVAEKWIKCGAEMIHLVDLDSAIYGTDTNKETIKKIIESVPVPVEVG GGVRTVEDALNLIDLGAERVILGTSAVKNPEIITELLEKGINSEKIMVALDAKDGKVVIKGWMEKTEYTPIEIGKILEEK GAGSILFTNVDVEGLLDGIDIEPVKKLVDELNIPIIASGGITTYDDLLKLKEIGVDGVVVGSAIYKEMMDLKKAIKIVKG E
Sequences:
>Translated_241_residues MIVIPAVDIKNKKCVQLIQGNPDKKHIELDNPLEVAEKWIKCGAEMIHLVDLDSAIYGTDTNKETIKKIIESVPVPVEVG GGVRTVEDALNLIDLGAERVILGTSAVKNPEIITELLEKGINSEKIMVALDAKDGKVVIKGWMEKTEYTPIEIGKILEEK GAGSILFTNVDVEGLLDGIDIEPVKKLVDELNIPIIASGGITTYDDLLKLKEIGVDGVVVGSAIYKEMMDLKKAIKIVKG E >Mature_241_residues MIVIPAVDIKNKKCVQLIQGNPDKKHIELDNPLEVAEKWIKCGAEMIHLVDLDSAIYGTDTNKETIKKIIESVPVPVEVG GGVRTVEDALNLIDLGAERVILGTSAVKNPEIITELLEKGINSEKIMVALDAKDGKVVIKGWMEKTEYTPIEIGKILEEK GAGSILFTNVDVEGLLDGIDIEPVKKLVDELNIPIIASGGITTYDDLLKLKEIGVDGVVVGSAIYKEMMDLKKAIKIVKG E
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=240, Percent_Identity=30.4166666666667, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI1788336, Length=240, Percent_Identity=23.75, Blast_Score=100, Evalue=7e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_META3 (A6UWA5)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001325389.1 - ProteinModelPortal: A6UWA5 - SMR: A6UWA5 - STRING: A6UWA5 - GeneID: 5327464 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_1200 - eggNOG: arNOG08089 - HOGENOM: HBG541613 - OMA: SIIYTDI - ProtClustDB: PRK13585 - BioCyc: MAEO419665:MAEO_1200-MONOMER - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00007
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 26177; Mature: 26177
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: ACT_SITE 8-8 ACT_SITE 131-131
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVIPAVDIKNKKCVQLIQGNPDKKHIELDNPLEVAEKWIKCGAEMIHLVDLDSAIYGTD CEEECCCCCCCHHHHHHHCCCCCCCEEECCCHHHHHHHHHHCCHHEEEEEECCCCEECCC TNKETIKKIIESVPVPVEVGGGVRTVEDALNLIDLGAERVILGTSAVKNPEIITELLEKG CCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCC INSEKIMVALDAKDGKVVIKGWMEKTEYTPIEIGKILEEKGAGSILFTNVDVEGLLDGID CCCCEEEEEEECCCCEEEEEEHHHHCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHCCCC IEPVKKLVDELNIPIIASGGITTYDDLLKLKEIGVDGVVVGSAIYKEMMDLKKAIKIVKG HHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCC E C >Mature Secondary Structure MIVIPAVDIKNKKCVQLIQGNPDKKHIELDNPLEVAEKWIKCGAEMIHLVDLDSAIYGTD CEEECCCCCCCHHHHHHHCCCCCCCEEECCCHHHHHHHHHHCCHHEEEEEECCCCEECCC TNKETIKKIIESVPVPVEVGGGVRTVEDALNLIDLGAERVILGTSAVKNPEIITELLEKG CCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCC INSEKIMVALDAKDGKVVIKGWMEKTEYTPIEIGKILEEKGAGSILFTNVDVEGLLDGID CCCCEEEEEEECCCCEEEEEEHHHHCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHCCCC IEPVKKLVDELNIPIIASGGITTYDDLLKLKEIGVDGVVVGSAIYKEMMDLKKAIKIVKG HHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA