Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150401581

Identifier: 150401581

GI number: 150401581

Start: 1216134

End: 1216625

Strand: Direct

Name: 150401581

Synonym: Maeo_1158

Alternate gene names: NA

Gene position: 1216134-1216625 (Clockwise)

Preceding gene: 150401580

Following gene: 150401582

Centisome position: 77.49

GC content: 29.67

Gene sequence:

>492_bases
ATGAAACACAGACATTTAAAAGATGAAGAATTAAAAATAATTAAAACTCAATTAAATAATTATATTGATGTATCTCTTTT
TGATTTCGATAAGTTGTATATAATGGAAGATGAAAAAATCGAAGTAATATATGCCACAAAAGAAGTAATAGAGAATGCCC
ATAAATTTACAAATATTCATTTTATTGGAATATCCTTTGGCTCATTTGAATTAAAACAAACCGGAAAATATAAATTTACA
ATGTCATTAGAGGGCATGTCTATTATTGCCGACAATATCTCTAAAAATTATATTGTAGTCAATGATAAAAGTGAAACCTT
ATTTTTATATGGTCGAGATATATTTAAATCCTCAATTATTGAGATGAATGGGGCCGGAAGAGTTGCCGTATTGAATGAAC
AAAGGGAGCTCCTTGGAATGGGAAATTATGCCGGCGGAGATATTGTTAAAACTGTGGTTGATAAAGGATGGTATTTGAGA
AAAGGGGGCTAA

Upstream 100 bases:

>100_bases
TAATAAAAAATAGATAATAAACAAAATAGTTATTATATATTATCCCATTGTATATTATATATAGATATAAAATATAGAAG
CTATTGTAGCTGTTGATATT

Downstream 100 bases:

>100_bases
ATAAATAATAAAAATAAAATAAATAATTATATATAGTCAATCTTCGGACAATTTCACTAAACCCATATATTAAAATGCAA
AATCACCATAAAATTAGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MKHRHLKDEELKIIKTQLNNYIDVSLFDFDKLYIMEDEKIEVIYATKEVIENAHKFTNIHFIGISFGSFELKQTGKYKFT
MSLEGMSIIADNISKNYIVVNDKSETLFLYGRDIFKSSIIEMNGAGRVAVLNEQRELLGMGNYAGGDIVKTVVDKGWYLR
KGG

Sequences:

>Translated_163_residues
MKHRHLKDEELKIIKTQLNNYIDVSLFDFDKLYIMEDEKIEVIYATKEVIENAHKFTNIHFIGISFGSFELKQTGKYKFT
MSLEGMSIIADNISKNYIVVNDKSETLFLYGRDIFKSSIIEMNGAGRVAVLNEQRELLGMGNYAGGDIVKTVVDKGWYLR
KGG
>Mature_163_residues
MKHRHLKDEELKIIKTQLNNYIDVSLFDFDKLYIMEDEKIEVIYATKEVIENAHKFTNIHFIGISFGSFELKQTGKYKFT
MSLEGMSIIADNISKNYIVVNDKSETLFLYGRDIFKSSIIEMNGAGRVAVLNEQRELLGMGNYAGGDIVKTVVDKGWYLR
KGG

Specific function: Unknown

COG id: COG1374

COG function: function code J; Protein involved in ribosomal biogenesis, contains PUA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0113 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005155 [H]

Pfam domain/function: PF03657 UPF0113 [H]

EC number: NA

Molecular weight: Translated: 18701; Mature: 18701

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHRHLKDEELKIIKTQLNNYIDVSLFDFDKLYIMEDEKIEVIYATKEVIENAHKFTNIH
CCCCCCCCHHHHHEEECCCCEEEEEEECCCEEEEEECCCEEEEEECHHHHHHHHHHEEEE
FIGISFGSFELKQTGKYKFTMSLEGMSIIADNISKNYIVVNDKSETLFLYGRDIFKSSII
EEEEEECCEEEEECCCEEEEEEECCCEEEECCCCCCEEEEECCCCEEEEEECHHHHHHHE
EMNGAGRVAVLNEQRELLGMGNYAGGDIVKTVVDKGWYLRKGG
EECCCCEEEEECCCHHEEECCCCCCHHHHHHHHCCCEEEECCC
>Mature Secondary Structure
MKHRHLKDEELKIIKTQLNNYIDVSLFDFDKLYIMEDEKIEVIYATKEVIENAHKFTNIH
CCCCCCCCHHHHHEEECCCCEEEEEEECCCEEEEEECCCEEEEEECHHHHHHHHHHEEEE
FIGISFGSFELKQTGKYKFTMSLEGMSIIADNISKNYIVVNDKSETLFLYGRDIFKSSII
EEEEEECCEEEEECCCEEEEEEECCCEEEECCCCCCEEEEECCCCEEEEEECHHHHHHHE
EMNGAGRVAVLNEQRELLGMGNYAGGDIVKTVVDKGWYLRKGG
EECCCCEEEEECCCHHEEECCCCCCHHHHHHHHCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]