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The map label for this gene is 150401579

Identifier: 150401579

GI number: 150401579

Start: 1214079

End: 1214378

Strand: Reverse

Name: 150401579

Synonym: Maeo_1156

Alternate gene names: NA

Gene position: 1214378-1214079 (Counterclockwise)

Preceding gene: 150401584

Following gene: 150401578

Centisome position: 77.37

GC content: 28.67

Gene sequence:

>300_bases
ATGGGTGTAATTATTTTAAAAAAAGTAAAATTATTACATAGAACTCCAAAAGGAAAACTTATCGGGATAACATCTGTCCA
ACCACAAATAAATTCATTCGTTTTTTTTAAAGATGGTAAAAAAAAAATAGGTAAAATTTACGATATTTTTGGACCTGCGA
ATAAGCCCTATGTAAAAATAATCCCGCTAAACGATTCAACAGCAGAAAGTGCCCTTAAATCGCAGGAGGCATATATTTCA
AATGAAGATAAAAAAAGAAGAAATAAAAGAGATAGTGGAAAAAGATTTGGGAAAAAATAA

Upstream 100 bases:

>100_bases
TTATATACTATGAATATCTATTGAATATTTATTAACAATAAATTTCAATGTTACATATCAATAAATTAATTATTCTATAT
ATATAATTAAATATATTATC

Downstream 100 bases:

>100_bases
TATAGTTAATTTTACCATATTCCTCGGGAATTCACAAATCTCTGATTTGGGTATAGAAGCTTCGCTTCTATCCGATAATT
TCCCTTGGAAATTATTGGGT

Product: H/ACA RNA-protein complex component Gar1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MGVIILKKVKLLHRTPKGKLIGITSVQPQINSFVFFKDGKKKIGKIYDIFGPANKPYVKIIPLNDSTAESALKSQEAYIS
NEDKKRRNKRDSGKRFGKK

Sequences:

>Translated_99_residues
MGVIILKKVKLLHRTPKGKLIGITSVQPQINSFVFFKDGKKKIGKIYDIFGPANKPYVKIIPLNDSTAESALKSQEAYIS
NEDKKRRNKRDSGKRFGKK
>Mature_98_residues
GVIILKKVKLLHRTPKGKLIGITSVQPQINSFVFFKDGKKKIGKIYDIFGPANKPYVKIIPLNDSTAESALKSQEAYISN
EDKKRRNKRDSGKRFGKK

Specific function: Unknown

COG id: COG3277

COG function: function code J; RNA-binding protein involved in rRNA processing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.thermoautotrophicum MTH886 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007504
- InterPro:   IPR020321
- InterPro:   IPR009000
- ProDom:   PD064583 [H]

Pfam domain/function: PF04410 Gar1 [H]

EC number: NA

Molecular weight: Translated: 11204; Mature: 11073

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVIILKKVKLLHRTPKGKLIGITSVQPQINSFVFFKDGKKKIGKIYDIFGPANKPYVKI
CCEEEHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCHHCCEEECCCCCCCCEEEE
IPLNDSTAESALKSQEAYISNEDKKRRNKRDSGKRFGKK
EECCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
GVIILKKVKLLHRTPKGKLIGITSVQPQINSFVFFKDGKKKIGKIYDIFGPANKPYVKI
CEEEHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCHHCCEEECCCCCCCCEEEE
IPLNDSTAESALKSQEAYISNEDKKRRNKRDSGKRFGKK
EECCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]