Definition | Methanococcus aeolicus Nankai-3, complete genome. |
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Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is 150401576
Identifier: 150401576
GI number: 150401576
Start: 1210204
End: 1211232
Strand: Reverse
Name: 150401576
Synonym: Maeo_1153
Alternate gene names: NA
Gene position: 1211232-1210204 (Counterclockwise)
Preceding gene: 150401577
Following gene: 150401575
Centisome position: 77.17
GC content: 28.18
Gene sequence:
>1029_bases ATGGCACAAGCTAAAAAAGATAGCACACTTAAAATATTTGTCAATAATTTATTATATAAATTAGGGTTTAAAAAAAGAAA AAGCATATCTGCCACATCAACACCAATTAAAGGGATTAGGGTATTAAAAAAACTATTCGAAGAAGGTGAATTGGAATTTT ACGAATCATACGAGGATGGAAAAATTGTAAAAAATATTGAAGAAATAATCCCCTCTGATAGTTTTCTATCAAAATCCTCT GAATCCTTAGTAGAAACAGTTAATAAAACTTCATTTTTACCATCTAAACGAGATTATCAATATATTGGCGTTAGTGATTT AAATGGCTATTTTTTAAAAACCCTTATTAAATCCTTTGGTTTTGGCGTATTATTTTTGATGATTCAGTTAGTCGATGGGG ATGTAATATATGCCATAACTCAAAGTATTGTTGTATTTTTATTATTTTTAATTGGGGGCATATTTTATCCAAAAATAAAA TTAATGTTATTTAAAGGAGAAGTGAAATTACAAATAATGATGGCAATGTTACATATGGTTTCAATGTTAAACTCTGGTGC ATCACTTCAAGAATGTATAAAAAATATAGGCTCGAATTCAGATTATGGGATAGTATCTTTTGAGTTTAAAAATGTTATAT ATGATATTGTGAGAGGAGGATATAATTTTAAAGAATCTCTTGAACGAGCTAAAAATAGGACAGGCATTTCGTTGATGGAA AAATTATATGCTCAATTAATAACTGCTTCAAATCAAGGTAAAGGTCAATTATTGTTGCAAAATTTATATGGCGAAATTAT TAGAGAAACCATGTCTACATTAGACAATTCTAAATTTCAAATTGGAAATTTAGGAAACCTCGTATTTGGAACTGGATTAA TACTACCATTTTCAGGTATGCTTCAATCTGCATTGACCGGGGGAGGGGGTTTTGATGGAATCAATAATACTATTGATTTA GTTTTAACTAAAATAGGACCAATATCTACAATTATGTTTGCAATATTTGTTAAAATAAAAATAGAGTAA
Upstream 100 bases:
>100_bases TAATAATATTAACGGCATAAAAAATGTTGGAAAAATTATATTGAGTTATCAAGAAAATCCGGAAAAAGTTATGAGCAAGA TTGGATAGTTGGTGGTTAAT
Downstream 100 bases:
>100_bases TATATATTGGTCATACTCCCCCATATACTCATATTCTTATTTGGTGAAAATATGGATTTAAAACAAATTTACAGCTACAC CATATCCCGTAATATATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MAQAKKDSTLKIFVNNLLYKLGFKKRKSISATSTPIKGIRVLKKLFEEGELEFYESYEDGKIVKNIEEIIPSDSFLSKSS ESLVETVNKTSFLPSKRDYQYIGVSDLNGYFLKTLIKSFGFGVLFLMIQLVDGDVIYAITQSIVVFLLFLIGGIFYPKIK LMLFKGEVKLQIMMAMLHMVSMLNSGASLQECIKNIGSNSDYGIVSFEFKNVIYDIVRGGYNFKESLERAKNRTGISLME KLYAQLITASNQGKGQLLLQNLYGEIIRETMSTLDNSKFQIGNLGNLVFGTGLILPFSGMLQSALTGGGGFDGINNTIDL VLTKIGPISTIMFAIFVKIKIE
Sequences:
>Translated_342_residues MAQAKKDSTLKIFVNNLLYKLGFKKRKSISATSTPIKGIRVLKKLFEEGELEFYESYEDGKIVKNIEEIIPSDSFLSKSS ESLVETVNKTSFLPSKRDYQYIGVSDLNGYFLKTLIKSFGFGVLFLMIQLVDGDVIYAITQSIVVFLLFLIGGIFYPKIK LMLFKGEVKLQIMMAMLHMVSMLNSGASLQECIKNIGSNSDYGIVSFEFKNVIYDIVRGGYNFKESLERAKNRTGISLME KLYAQLITASNQGKGQLLLQNLYGEIIRETMSTLDNSKFQIGNLGNLVFGTGLILPFSGMLQSALTGGGGFDGINNTIDL VLTKIGPISTIMFAIFVKIKIE >Mature_341_residues AQAKKDSTLKIFVNNLLYKLGFKKRKSISATSTPIKGIRVLKKLFEEGELEFYESYEDGKIVKNIEEIIPSDSFLSKSSE SLVETVNKTSFLPSKRDYQYIGVSDLNGYFLKTLIKSFGFGVLFLMIQLVDGDVIYAITQSIVVFLLFLIGGIFYPKIKL MLFKGEVKLQIMMAMLHMVSMLNSGASLQECIKNIGSNSDYGIVSFEFKNVIYDIVRGGYNFKESLERAKNRTGISLMEK LYAQLITASNQGKGQLLLQNLYGEIIRETMSTLDNSKFQIGNLGNLVFGTGLILPFSGMLQSALTGGGGFDGINNTIDLV LTKIGPISTIMFAIFVKIKIE
Specific function: Unknown
COG id: COG2064
COG function: function code NU; Flp pilus assembly protein TadC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018076 [H]
Pfam domain/function: PF00482 GSPII_F [H]
EC number: NA
Molecular weight: Translated: 38075; Mature: 37944
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQAKKDSTLKIFVNNLLYKLGFKKRKSISATSTPIKGIRVLKKLFEEGELEFYESYEDG CCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCC KIVKNIEEIIPSDSFLSKSSESLVETVNKTSFLPSKRDYQYIGVSDLNGYFLKTLIKSFG HHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHC FGVLFLMIQLVDGDVIYAITQSIVVFLLFLIGGIFYPKIKLMLFKGEVKLQIMMAMLHMV HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHH SMLNSGASLQECIKNIGSNSDYGIVSFEFKNVIYDIVRGGYNFKESLERAKNRTGISLME HHHCCCCHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHH KLYAQLITASNQGKGQLLLQNLYGEIIRETMSTLDNSKFQIGNLGNLVFGTGLILPFSGM HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHH LQSALTGGGGFDGINNTIDLVLTKIGPISTIMFAIFVKIKIE HHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHEEEC >Mature Secondary Structure AQAKKDSTLKIFVNNLLYKLGFKKRKSISATSTPIKGIRVLKKLFEEGELEFYESYEDG CCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCC KIVKNIEEIIPSDSFLSKSSESLVETVNKTSFLPSKRDYQYIGVSDLNGYFLKTLIKSFG HHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHC FGVLFLMIQLVDGDVIYAITQSIVVFLLFLIGGIFYPKIKLMLFKGEVKLQIMMAMLHMV HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHH SMLNSGASLQECIKNIGSNSDYGIVSFEFKNVIYDIVRGGYNFKESLERAKNRTGISLME HHHCCCCHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHH KLYAQLITASNQGKGQLLLQNLYGEIIRETMSTLDNSKFQIGNLGNLVFGTGLILPFSGM HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHH LQSALTGGGGFDGINNTIDLVLTKIGPISTIMFAIFVKIKIE HHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]