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The map label for this gene is tfe [H]

Identifier: 150401573

GI number: 150401573

Start: 1207958

End: 1208509

Strand: Direct

Name: tfe [H]

Synonym: Maeo_1150

Alternate gene names: 150401573

Gene position: 1207958-1208509 (Clockwise)

Preceding gene: 150401572

Following gene: 150401574

Centisome position: 76.96

GC content: 29.35

Gene sequence:

>552_bases
ATGAATATGACAAAAGAAGATGTATACGATATGTTAAATAATCCAATCATCCAACAAGTATTATTGGAGATATTGGGTGA
CGATATTAATGGATTTAATGTATTAGAAGCCCTCACCGAACTGACAGAAGTTACAGACGATGAAATTTCAAGACAATTGG
ATTTAAAATTAAACACTGTAAGAAAATTACTTTATAAATTATATGACGCTCGGCTTGTAGATTATAATAGGGAAAAAGAT
GAAGAAACAAACTGGTATAGCTACACATGGAGGGCAACATTTACAAAATTACCGGGGGTCGTTAAAAAAAGGATGGAACA
ACTGTTAATCGACCTTAAAGAACAATTGGAGGTTGAAGAAAATACTTTATTTTTTTATTGTCCAAGATGTGAATTCAAAT
ATTCTTTCGACGAAGCAATAGATTATGGATTTAGATGTTCGCAATGCAATGGAGTTTTAAAAGAATACAATAATAAAAAT
GATATATTAATGATTAAAAATCAAATAAAAATAATTGAGGAAGAATTAGCCCTCAATCCTTTATTTTCTTAA

Upstream 100 bases:

>100_bases
GCTATAATAGAGAAAAATGAGCCACTAGCGACAACAATTATTAAAGCATCCGTCATTAACGACACAATAATAAATAATAT
TTCAAAGATGGTGGTTAATT

Downstream 100 bases:

>100_bases
TTTTTTGACCTATGTCCCAATTCATTTAGATTTATATGTTGGATGATTATTATGCCTGGAAATAATGATTTTTTTTTAGA
ATCGGATATTATAGATAAAT

Product: transcription initiation factor E subunit alpha

Products: NA

Alternate protein names: TFE; TFIIE subunit alpha homolog; Transcription initiation factor TFIIE [H]

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MNMTKEDVYDMLNNPIIQQVLLEILGDDINGFNVLEALTELTEVTDDEISRQLDLKLNTVRKLLYKLYDARLVDYNREKD
EETNWYSYTWRATFTKLPGVVKKRMEQLLIDLKEQLEVEENTLFFYCPRCEFKYSFDEAIDYGFRCSQCNGVLKEYNNKN
DILMIKNQIKIIEEELALNPLFS

Sequences:

>Translated_183_residues
MNMTKEDVYDMLNNPIIQQVLLEILGDDINGFNVLEALTELTEVTDDEISRQLDLKLNTVRKLLYKLYDARLVDYNREKD
EETNWYSYTWRATFTKLPGVVKKRMEQLLIDLKEQLEVEENTLFFYCPRCEFKYSFDEAIDYGFRCSQCNGVLKEYNNKN
DILMIKNQIKIIEEELALNPLFS
>Mature_183_residues
MNMTKEDVYDMLNNPIIQQVLLEILGDDINGFNVLEALTELTEVTDDEISRQLDLKLNTVRKLLYKLYDARLVDYNREKD
EETNWYSYTWRATFTKLPGVVKKRMEQLLIDLKEQLEVEENTLFFYCPRCEFKYSFDEAIDYGFRCSQCNGVLKEYNNKN
DILMIKNQIKIIEEELALNPLFS

Specific function: Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (tbp), and transcription factor B (tfb) and RNA po

COG id: COG1675

COG function: function code K; Transcription initiation factor IIE, alpha subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH TFE/IIEalpha-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016481
- InterPro:   IPR017919
- InterPro:   IPR011991 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21768; Mature: 21768

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMTKEDVYDMLNNPIIQQVLLEILGDDINGFNVLEALTELTEVTDDEISRQLDLKLNTV
CCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCHHHHH
RKLLYKLYDARLVDYNREKDEETNWYSYTWRATFTKLPGVVKKRMEQLLIDLKEQLEVEE
HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHCHHHHHHHHHHHHHHHHHHCCCCC
NTLFFYCPRCEFKYSFDEAIDYGFRCSQCNGVLKEYNNKNDILMIKNQIKIIEEELALNP
CEEEEEECCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCC
LFS
CCC
>Mature Secondary Structure
MNMTKEDVYDMLNNPIIQQVLLEILGDDINGFNVLEALTELTEVTDDEISRQLDLKLNTV
CCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCHHHHH
RKLLYKLYDARLVDYNREKDEETNWYSYTWRATFTKLPGVVKKRMEQLLIDLKEQLEVEE
HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHCHHHHHHHHHHHHHHHHHHCCCCC
NTLFFYCPRCEFKYSFDEAIDYGFRCSQCNGVLKEYNNKNDILMIKNQIKIIEEELALNP
CEEEEEECCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCC
LFS
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA