Definition | Methanococcus aeolicus Nankai-3, complete genome. |
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Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is kch [C]
Identifier: 150401565
GI number: 150401565
Start: 1196393
End: 1197418
Strand: Reverse
Name: kch [C]
Synonym: Maeo_1142
Alternate gene names: 150401565
Gene position: 1197418-1196393 (Counterclockwise)
Preceding gene: 150401569
Following gene: 150401564
Centisome position: 76.29
GC content: 28.65
Gene sequence:
>1026_bases ATGGATGTTGTTGATAAAATAAAAATAAGTATATTTGTAATGTTTAGTTTAATAATGGCATATGCTGGGCTTATGGCATA TTTTGAAGGATTAAATACATTGGACGCCATATATTATTCAATAACCACAATTACAACGGTTGGTTTTGGGGATTTTGTTC CAATAACTTCGAACGGTAAGATTATTACTGCAATATATGTTCTATTAGGTGTTAGTATTGGATTATATACTCTCGGTAAT TTTGCCGACTTTTTTATTGGGGGTTATTTTCAAAAAACAAAGCAGTTGAAAATTATGGATAAAAAAATAAGTAAATTAAA AAATCATTATATTATATGTGGATATGGTAAAAGTGGAAGGGTTGTTGTAGATAAATTTGAAAAAGAAGGGATTGAATATG TCGTGATAGATAATAATATAGATACATTGGAGAACGAACTATCAAATAATCCTAATTTTAAATATATTGTAGGCGATGCC ACTCATGATGAAATATTATATAATGCAAAAATAAATGATGCAAAAGGACTTATTTCATCAGTTTCAAATGATTCTGATAA TGTATATATTGTATTATCATCAAGAAGAATAAATCCTGATTTATATATTGTAGCAAAGGCAGATGAGCAAGTTGCTATGG ATAAACTTCTTATTGCAGGGGCAGATAAAGTTGTTTCTCCTTATGTAATTGGCGGTTTAAGAATGGCTGAATTGGCAGTA AAGCCAGGAATATTAGATTTTGTTTCAACATTTATGTCCATAGCAAAATATGAATATGATGAAGATTTAGAGATACGAAA AATAATAGTTGAAGATGGCTCGGAGCTCCACAATAATACAATATTAAATACAAATATCCGACAAAAAAGTGGTGCTACAA TTATTGGAATTAAGAAAGAAAATAATTTAATAACAAATCCTCCGGCAGATATTGTTCTGGATTCAGATGATATATTATAT GCATTTGGAACAAAAGAACAACTTGATAGTTTGGAAAATCTTGCCAAAAAACAAAAAAAACAATAA
Upstream 100 bases:
>100_bases TTTATATTTTATAATATATCTAATATAATGTTGATAAATGTCTCTGGTGTATGGCATAATAATATAATTGATATCAGATT AATAGTATATTTGTGGTTAT
Downstream 100 bases:
>100_bases TATTACTTTTTTAATATTTTTTTATCGTATTGTCTTAGTCGAATATCTGGCAATTAGTAGTGGTTATTGAATATTTATGT TTATATTTATTATTGTTTCC
Product: TrkA domain-containing protein
Products: K (I) [Cytoplasm] [C]
Alternate protein names: MjK2 [H]
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MDVVDKIKISIFVMFSLIMAYAGLMAYFEGLNTLDAIYYSITTITTVGFGDFVPITSNGKIITAIYVLLGVSIGLYTLGN FADFFIGGYFQKTKQLKIMDKKISKLKNHYIICGYGKSGRVVVDKFEKEGIEYVVIDNNIDTLENELSNNPNFKYIVGDA THDEILYNAKINDAKGLISSVSNDSDNVYIVLSSRRINPDLYIVAKADEQVAMDKLLIAGADKVVSPYVIGGLRMAELAV KPGILDFVSTFMSIAKYEYDEDLEIRKIIVEDGSELHNNTILNTNIRQKSGATIIGIKKENNLITNPPADIVLDSDDILY AFGTKEQLDSLENLAKKQKKQ
Sequences:
>Translated_341_residues MDVVDKIKISIFVMFSLIMAYAGLMAYFEGLNTLDAIYYSITTITTVGFGDFVPITSNGKIITAIYVLLGVSIGLYTLGN FADFFIGGYFQKTKQLKIMDKKISKLKNHYIICGYGKSGRVVVDKFEKEGIEYVVIDNNIDTLENELSNNPNFKYIVGDA THDEILYNAKINDAKGLISSVSNDSDNVYIVLSSRRINPDLYIVAKADEQVAMDKLLIAGADKVVSPYVIGGLRMAELAV KPGILDFVSTFMSIAKYEYDEDLEIRKIIVEDGSELHNNTILNTNIRQKSGATIIGIKKENNLITNPPADIVLDSDDILY AFGTKEQLDSLENLAKKQKKQ >Mature_341_residues MDVVDKIKISIFVMFSLIMAYAGLMAYFEGLNTLDAIYYSITTITTVGFGDFVPITSNGKIITAIYVLLGVSIGLYTLGN FADFFIGGYFQKTKQLKIMDKKISKLKNHYIICGYGKSGRVVVDKFEKEGIEYVVIDNNIDTLENELSNNPNFKYIVGDA THDEILYNAKINDAKGLISSVSNDSDNVYIVLSSRRINPDLYIVAKADEQVAMDKLLIAGADKVVSPYVIGGLRMAELAV KPGILDFVSTFMSIAKYEYDEDLEIRKIIVEDGSELHNNTILNTNIRQKSGATIIGIKKENNLITNPPADIVLDSDDILY AFGTKEQLDSLENLAKKQKKQ
Specific function: Probable potassium channel protein [H]
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1787503, Length=239, Percent_Identity=25.5230125523013, Blast_Score=91, Evalue=9e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013099 - InterPro: IPR016040 - InterPro: IPR006037 - InterPro: IPR003148 [H]
Pfam domain/function: PF07885 Ion_trans_2; PF02080 TrkA_C; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 37901; Mature: 37901
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVVDKIKISIFVMFSLIMAYAGLMAYFEGLNTLDAIYYSITTITTVGFGDFVPITSNGK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCCEEEECCCCC IITAIYVLLGVSIGLYTLGNFADFFIGGYFQKTKQLKIMDKKISKLKNHYIICGYGKSGR HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC VVVDKFEKEGIEYVVIDNNIDTLENELSNNPNFKYIVGDATHDEILYNAKINDAKGLISS EEEEEHHHCCCEEEEECCCHHHHHHHHCCCCCEEEEECCCCCCCEEEEEECCHHHHHHHH VSNDSDNVYIVLSSRRINPDLYIVAKADEQVAMDKLLIAGADKVVSPYVIGGLRMAELAV CCCCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHEECCCHHCCCHHHCCCEEEHHHH KPGILDFVSTFMSIAKYEYDEDLEIRKIIVEDGSELHNNTILNTNIRQKSGATIIGIKKE CCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHCCEEEECCCCCCCCCEEEEEECC NNLITNPPADIVLDSDDILYAFGTKEQLDSLENLAKKQKKQ CCEECCCCCCEEECCCCEEEEECCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDVVDKIKISIFVMFSLIMAYAGLMAYFEGLNTLDAIYYSITTITTVGFGDFVPITSNGK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCCEEEECCCCC IITAIYVLLGVSIGLYTLGNFADFFIGGYFQKTKQLKIMDKKISKLKNHYIICGYGKSGR HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC VVVDKFEKEGIEYVVIDNNIDTLENELSNNPNFKYIVGDATHDEILYNAKINDAKGLISS EEEEEHHHCCCEEEEECCCHHHHHHHHCCCCCEEEEECCCCCCCEEEEEECCHHHHHHHH VSNDSDNVYIVLSSRRINPDLYIVAKADEQVAMDKLLIAGADKVVSPYVIGGLRMAELAV CCCCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHEECCCHHCCCHHHCCCEEEHHHH KPGILDFVSTFMSIAKYEYDEDLEIRKIIVEDGSELHNNTILNTNIRQKSGATIIGIKKE CCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHCCEEEECCCCCCCCCEEEEEECC NNLITNPPADIVLDSDDILYAFGTKEQLDSLENLAKKQKKQ CCEECCCCCCEEECCCCEEEEECCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]