Definition | Methanococcus aeolicus Nankai-3, complete genome. |
---|---|
Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is 150401562
Identifier: 150401562
GI number: 150401562
Start: 1182982
End: 1183800
Strand: Reverse
Name: 150401562
Synonym: Maeo_1139
Alternate gene names: NA
Gene position: 1183800-1182982 (Counterclockwise)
Preceding gene: 150401564
Following gene: 150401561
Centisome position: 75.43
GC content: 32.36
Gene sequence:
>819_bases TTGGCTATAGATAATATTTTTTGGATATTTTTCATATTCTTATTCTTTTATCCTCAGTTAATGTTTAAATTAAAATTAAT ACAAAGATATAATTGCATAAAGAAACTTGAAAAAGAGAGAAAAACAAGAGTAATCGCAATGATACATAGGCAGGAAACAT TGGCTTTATTTGGTATTCCATTGTATCGGTTTATAAATATGGAAGATAGTGAAGAAGTTCTGCGAGCAATTAGGATGACT TCTGATGATGTCCCCATAGATTTAATACTTCATACTCCCGGAGGGCTTGTGCTTGCGAGTGAGCAAATAGCCATGGCTTT AAAAGAACATAAGGCAAAAACTACCGTAATAATACCCCATTATGCCATGAGCGGAGGTAGTTTAATATCTCTTGCCGTAG ATGAAATAATAATGGATAAAAATGCAGTTATGGGGCCGGTTGACCCTCAAATTGGACAATATCCTGCTGCATCTATATTA AATGTTATAGATACAAAGTATGTAGATGAATTGGAAGACGAAACATTAATTTTAGGAGACATAGCAAAAAAAGCAATAAA TCAAGTGGGGGAGTTTGTATATTGGTTATTAAAAGATAAAATGAGTGAAGAAAAAGCAAAATATATTACTGAATTGATAT CTACGGGAGTATGGACGCATGATTATCCTCTTACAATCAATAAGTTAAAGGATATGGGCATAAAAGTAAATACAAATGTT CCAAAAACAATGTATGATTTATTTGATTTATACAAACAACCAACCGGTCAAAAACCATCGGTTCAATATGTTCCTGCCCC GTATGGTAAGATAAAATAA
Upstream 100 bases:
>100_bases GAAAATATCGAAATATGACTTAATATTTTGGAACACATAAAGAATATTTACCATAGTTCTTGAACATATAATATATTAAT TTAAATTTGGGTGAATTATG
Downstream 100 bases:
>100_bases ATATAAACTACATCAAACTACCTCTAAATTATTATTAATTTAATTCAATAACATAAAATTTGAGTTTATCATATATGGCC TGAAAAAGACCGAATATTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MAIDNIFWIFFIFLFFYPQLMFKLKLIQRYNCIKKLEKERKTRVIAMIHRQETLALFGIPLYRFINMEDSEEVLRAIRMT SDDVPIDLILHTPGGLVLASEQIAMALKEHKAKTTVIIPHYAMSGGSLISLAVDEIIMDKNAVMGPVDPQIGQYPAASIL NVIDTKYVDELEDETLILGDIAKKAINQVGEFVYWLLKDKMSEEKAKYITELISTGVWTHDYPLTINKLKDMGIKVNTNV PKTMYDLFDLYKQPTGQKPSVQYVPAPYGKIK
Sequences:
>Translated_272_residues MAIDNIFWIFFIFLFFYPQLMFKLKLIQRYNCIKKLEKERKTRVIAMIHRQETLALFGIPLYRFINMEDSEEVLRAIRMT SDDVPIDLILHTPGGLVLASEQIAMALKEHKAKTTVIIPHYAMSGGSLISLAVDEIIMDKNAVMGPVDPQIGQYPAASIL NVIDTKYVDELEDETLILGDIAKKAINQVGEFVYWLLKDKMSEEKAKYITELISTGVWTHDYPLTINKLKDMGIKVNTNV PKTMYDLFDLYKQPTGQKPSVQYVPAPYGKIK >Mature_271_residues AIDNIFWIFFIFLFFYPQLMFKLKLIQRYNCIKKLEKERKTRVIAMIHRQETLALFGIPLYRFINMEDSEEVLRAIRMTS DDVPIDLILHTPGGLVLASEQIAMALKEHKAKTTVIIPHYAMSGGSLISLAVDEIIMDKNAVMGPVDPQIGQYPAASILN VIDTKYVDELEDETLILGDIAKKAINQVGEFVYWLLKDKMSEEKAKYITELISTGVWTHDYPLTINKLKDMGIKVNTNVP KTMYDLFDLYKQPTGQKPSVQYVPAPYGKIK
Specific function: Unknown
COG id: COG0616
COG function: function code OU; Periplasmic serine proteases (ClpP class)
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0137 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002825 [H]
Pfam domain/function: PF01972 DUF114 [H]
EC number: NA
Molecular weight: Translated: 31141; Mature: 31010
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIDNIFWIFFIFLFFYPQLMFKLKLIQRYNCIKKLEKERKTRVIAMIHRQETLALFGIP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH LYRFINMEDSEEVLRAIRMTSDDVPIDLILHTPGGLVLASEQIAMALKEHKAKTTVIIPH HHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHCCCEEEEEEC YAMSGGSLISLAVDEIIMDKNAVMGPVDPQIGQYPAASILNVIDTKYVDELEDETLILGD EECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEHHH IAKKAINQVGEFVYWLLKDKMSEEKAKYITELISTGVWTHDYPLTINKLKDMGIKVNTNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHCCEEEECCC PKTMYDLFDLYKQPTGQKPSVQYVPAPYGKIK CHHHHHHHHHHHCCCCCCCCEEECCCCCCCCC >Mature Secondary Structure AIDNIFWIFFIFLFFYPQLMFKLKLIQRYNCIKKLEKERKTRVIAMIHRQETLALFGIP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH LYRFINMEDSEEVLRAIRMTSDDVPIDLILHTPGGLVLASEQIAMALKEHKAKTTVIIPH HHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHCCCEEEEEEC YAMSGGSLISLAVDEIIMDKNAVMGPVDPQIGQYPAASILNVIDTKYVDELEDETLILGD EECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEHHH IAKKAINQVGEFVYWLLKDKMSEEKAKYITELISTGVWTHDYPLTINKLKDMGIKVNTNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHCCEEEECCC PKTMYDLFDLYKQPTGQKPSVQYVPAPYGKIK CHHHHHHHHHHHCCCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]