Definition | Methanococcus aeolicus Nankai-3, complete genome. |
---|---|
Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is 150401554
Identifier: 150401554
GI number: 150401554
Start: 1175044
End: 1175370
Strand: Reverse
Name: 150401554
Synonym: Maeo_1131
Alternate gene names: NA
Gene position: 1175370-1175044 (Counterclockwise)
Preceding gene: 150401557
Following gene: 150401553
Centisome position: 74.89
GC content: 27.22
Gene sequence:
>327_bases ATGGATTTTGTAAAAATGGCATCCAAGGAAATGTTTAAAGGTTCGAAAATGCTTTCCAAACATTGTGATGTTTGTGGAGC TCCCATGTTTGAAGACAAAGAAGGCAATGAATATTGTCCCCAATGTAATCATGAGGATAAAATAACAAACATGGACAACA TAGATAAATCTACCAGCAATATTGATAACAATAACCATCAAGAAATATTAAATAAAAAAATAAATTATTTATTTGATAAA TTAGATAATGAAACTGATATAAACAGAATAACTGAAATTGGAATTGCACTTAAAACTATAATGGAATTACGATATAAAGA AATATAG
Upstream 100 bases:
>100_bases ATATATTGTTCTAATTCAATATATTATTAATATTGATTAAAATTATAAATTATATGATATAAATAAACTACCAATATATA AAATAATTTGCGGTGAGTTG
Downstream 100 bases:
>100_bases TCAATCTTCGGTCTCTTTCATTAAACTGCACAATTAAACTAAAATCTCTGTGGTATTAGAGAAAAACAAAGGAATTTGTT TACAAAATCTTCGATTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MDFVKMASKEMFKGSKMLSKHCDVCGAPMFEDKEGNEYCPQCNHEDKITNMDNIDKSTSNIDNNNHQEILNKKINYLFDK LDNETDINRITEIGIALKTIMELRYKEI
Sequences:
>Translated_108_residues MDFVKMASKEMFKGSKMLSKHCDVCGAPMFEDKEGNEYCPQCNHEDKITNMDNIDKSTSNIDNNNHQEILNKKINYLFDK LDNETDINRITEIGIALKTIMELRYKEI >Mature_108_residues MDFVKMASKEMFKGSKMLSKHCDVCGAPMFEDKEGNEYCPQCNHEDKITNMDNIDKSTSNIDNNNHQEILNKKINYLFDK LDNETDINRITEIGIALKTIMELRYKEI
Specific function: Unknown
COG id: COG1645
COG function: function code R; Uncharacterized Zn-finger containing protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0148 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009563 - InterPro: IPR022954 [H]
Pfam domain/function: PF06677 Auto_anti-p27 [H]
EC number: NA
Molecular weight: Translated: 12583; Mature: 12583
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 10.2 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 10.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFVKMASKEMFKGSKMLSKHCDVCGAPMFEDKEGNEYCPQCNHEDKITNMDNIDKSTSN CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IDNNNHQEILNKKINYLFDKLDNETDINRITEIGIALKTIMELRYKEI CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDFVKMASKEMFKGSKMLSKHCDVCGAPMFEDKEGNEYCPQCNHEDKITNMDNIDKSTSN CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IDNNNHQEILNKKINYLFDKLDNETDINRITEIGIALKTIMELRYKEI CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]